BLASTX nr result

ID: Coptis21_contig00002187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002187
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299970.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31
gb|ACJ85601.1| unknown [Medicago truncatula]                          136   2e-30
ref|XP_003617222.1| Dihydropyrimidinase [Medicago truncatula] gi...   136   2e-30
dbj|BAJ88551.1| predicted protein [Hordeum vulgare subsp. vulgare]    135   3e-30
dbj|BAJ87941.1| predicted protein [Hordeum vulgare subsp. vulgare]    135   3e-30

>ref|XP_002299970.1| predicted protein [Populus trichocarpa] gi|222847228|gb|EEE84775.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  138 bits (347), Expect = 5e-31
 Identities = 78/123 (63%), Positives = 81/123 (65%)
 Frame = +1

Query: 1   ITGPEGHALSRPPAVVF*FFGCSHKQSCMDPCDYLQADAYKICTLPN*FYANQLEGEATS 180
           ITGPEGHALSRPP                                        LEGEAT+
Sbjct: 221 ITGPEGHALSRPPL---------------------------------------LEGEATA 241

Query: 181 RAIRLAGFVNTPLYVVHVMSIDAMEEIAKARKSGQRVVGEPVVSGLVLDDSWLWDNDFTT 360
           RAIRLAGFVNTPLYVVHVMSIDAMEEIAKARKSGQRVVGEPVVSGL LDDS LWD+DFTT
Sbjct: 242 RAIRLAGFVNTPLYVVHVMSIDAMEEIAKARKSGQRVVGEPVVSGLALDDSGLWDSDFTT 301

Query: 361 AAK 369
           A+K
Sbjct: 302 ASK 304


>gb|ACJ85601.1| unknown [Medicago truncatula]
          Length = 310

 Score =  136 bits (343), Expect = 2e-30
 Identities = 76/123 (61%), Positives = 78/123 (63%)
 Frame = +1

Query: 1   ITGPEGHALSRPPAVVF*FFGCSHKQSCMDPCDYLQADAYKICTLPN*FYANQLEGEATS 180
           ITGPEGH LSRPP                                        LEGEATS
Sbjct: 50  ITGPEGHPLSRPP---------------------------------------MLEGEATS 70

Query: 181 RAIRLAGFVNTPLYVVHVMSIDAMEEIAKARKSGQRVVGEPVVSGLVLDDSWLWDNDFTT 360
           RAIRLA FVNTPLYVVHVMSIDAMEEIAKARKSGQRV+GEP+VSGL LDDSWLW  DFTT
Sbjct: 71  RAIRLADFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPIVSGLALDDSWLWHPDFTT 130

Query: 361 AAK 369
           AAK
Sbjct: 131 AAK 133


>ref|XP_003617222.1| Dihydropyrimidinase [Medicago truncatula]
           gi|355518557|gb|AET00181.1| Dihydropyrimidinase
           [Medicago truncatula]
          Length = 534

 Score =  136 bits (343), Expect = 2e-30
 Identities = 76/123 (61%), Positives = 78/123 (63%)
 Frame = +1

Query: 1   ITGPEGHALSRPPAVVF*FFGCSHKQSCMDPCDYLQADAYKICTLPN*FYANQLEGEATS 180
           ITGPEGH LSRPP                                        LEGEATS
Sbjct: 249 ITGPEGHPLSRPP---------------------------------------MLEGEATS 269

Query: 181 RAIRLAGFVNTPLYVVHVMSIDAMEEIAKARKSGQRVVGEPVVSGLVLDDSWLWDNDFTT 360
           RAIRLA FVNTPLYVVHVMSIDAMEEIAKARKSGQRV+GEP+VSGL LDDSWLW  DFTT
Sbjct: 270 RAIRLADFVNTPLYVVHVMSIDAMEEIAKARKSGQRVIGEPIVSGLALDDSWLWHPDFTT 329

Query: 361 AAK 369
           AAK
Sbjct: 330 AAK 332


>dbj|BAJ88551.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 526

 Score =  135 bits (341), Expect = 3e-30
 Identities = 75/123 (60%), Positives = 79/123 (64%)
 Frame = +1

Query: 1   ITGPEGHALSRPPAVVF*FFGCSHKQSCMDPCDYLQADAYKICTLPN*FYANQLEGEATS 180
           ITGPEGHALSRPP                                        LEGEATS
Sbjct: 240 ITGPEGHALSRPPV---------------------------------------LEGEATS 260

Query: 181 RAIRLAGFVNTPLYVVHVMSIDAMEEIAKARKSGQRVVGEPVVSGLVLDDSWLWDNDFTT 360
           RAIRLA FVNTPLYVVHVMSIDAMEEIAKA++ GQRV+GEPVVSGLVLDDSWLWD DF T
Sbjct: 261 RAIRLAKFVNTPLYVVHVMSIDAMEEIAKAKREGQRVIGEPVVSGLVLDDSWLWDPDFAT 320

Query: 361 AAK 369
           A+K
Sbjct: 321 ASK 323


>dbj|BAJ87941.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 403

 Score =  135 bits (341), Expect = 3e-30
 Identities = 75/123 (60%), Positives = 79/123 (64%)
 Frame = +1

Query: 1   ITGPEGHALSRPPAVVF*FFGCSHKQSCMDPCDYLQADAYKICTLPN*FYANQLEGEATS 180
           ITGPEGHALSRPP                                        LEGEATS
Sbjct: 117 ITGPEGHALSRPPV---------------------------------------LEGEATS 137

Query: 181 RAIRLAGFVNTPLYVVHVMSIDAMEEIAKARKSGQRVVGEPVVSGLVLDDSWLWDNDFTT 360
           RAIRLA FVNTPLYVVHVMSIDAMEEIAKA++ GQRV+GEPVVSGLVLDDSWLWD DF T
Sbjct: 138 RAIRLAKFVNTPLYVVHVMSIDAMEEIAKAKREGQRVIGEPVVSGLVLDDSWLWDPDFAT 197

Query: 361 AAK 369
           A+K
Sbjct: 198 ASK 200


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