BLASTX nr result

ID: Coptis21_contig00002181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002181
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]    58   1e-06
emb|CBI32233.3| unnamed protein product [Vitis vinifera]               58   2e-06
emb|CAN77802.1| hypothetical protein VITISV_004741 [Vitis vinifera]    57   2e-06
ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containin...    56   5e-06

>emb|CAN75696.1| hypothetical protein VITISV_035983 [Vitis vinifera]
          Length = 596

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/77 (35%), Positives = 42/77 (54%)
 Frame = -3

Query: 647 YKKRQWKTNLELLKQQYHICVDLTKKVGYGYNVASNTIDWSPEMWEKYEKTRSEAKQFRR 468
           Y  +Q K   + +K+QY I   +    G+GYN  + T DW  E WE+Y +   EAKQFR 
Sbjct: 59  YTSKQLKNGWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKYPEAKQFRF 118

Query: 467 QRLQYADDLASLLDDIV 417
           + L   ++L +L   ++
Sbjct: 119 KPLANVEELEALFGGVL 135


>emb|CBI32233.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/77 (33%), Positives = 42/77 (54%)
 Frame = -3

Query: 647 YKKRQWKTNLELLKQQYHICVDLTKKVGYGYNVASNTIDWSPEMWEKYEKTRSEAKQFRR 468
           Y  +Q K   + +K+QY I   +    G+GYN  + T DW  E WE+Y +   E KQFR 
Sbjct: 59  YTSKQLKNGWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKYPETKQFRF 118

Query: 467 QRLQYADDLASLLDDIV 417
           + L   ++L +L + ++
Sbjct: 119 KPLANVEELEALFEGVL 135


>emb|CAN77802.1| hypothetical protein VITISV_004741 [Vitis vinifera]
          Length = 473

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/77 (33%), Positives = 42/77 (54%)
 Frame = -3

Query: 647 YKKRQWKTNLELLKQQYHICVDLTKKVGYGYNVASNTIDWSPEMWEKYEKTRSEAKQFRR 468
           Y  +Q K   + +K+QY I   +    G+GYN  + T DW  E WE+Y +   E KQFR 
Sbjct: 95  YTSKQLKNGWDYMKRQYLIWSKMMTMXGHGYNSVTKTFDWXAEKWEEYLQKYPETKQFRF 154

Query: 467 QRLQYADDLASLLDDIV 417
           + L   ++L +L + ++
Sbjct: 155 KPLANVEELEALFEGVL 171


>ref|XP_002267702.2| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Vitis vinifera] gi|297739472|emb|CBI29654.3| unnamed
           protein product [Vitis vinifera]
          Length = 299

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 26/77 (33%), Positives = 42/77 (54%)
 Frame = -3

Query: 647 YKKRQWKTNLELLKQQYHICVDLTKKVGYGYNVASNTIDWSPEMWEKYEKTRSEAKQFRR 468
           +  +Q K   + +K+QY I   +    G+GYN  + T DW  E WE+Y +   EAKQFR 
Sbjct: 87  FTSKQLKNEWDYMKRQYLIWSKMMTMTGHGYNSVTKTFDWPAEKWEEYLQKYPEAKQFRF 146

Query: 467 QRLQYADDLASLLDDIV 417
           + L   ++L +L   ++
Sbjct: 147 KPLANMEELEALFGGVL 163


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