BLASTX nr result

ID: Coptis21_contig00002174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002174
         (2113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21950.3| unnamed protein product [Vitis vinifera]              404   e-110
ref|XP_002276195.1| PREDICTED: transcription factor GTE4-like [V...   401   e-109
emb|CAN67478.1| hypothetical protein VITISV_035453 [Vitis vinifera]   401   e-109
ref|XP_002525131.1| bromodomain-containing protein, putative [Ri...   395   e-107
ref|XP_002283002.1| PREDICTED: transcription factor GTE4-like [V...   383   e-103

>emb|CBI21950.3| unnamed protein product [Vitis vinifera]
          Length = 612

 Score =  404 bits (1038), Expect = e-110
 Identities = 234/455 (51%), Positives = 276/455 (60%), Gaps = 29/455 (6%)
 Frame = +1

Query: 388  RVKISLGLRSKQETRELRRKLMNELTQVRNLVKRLEAKEVQGRXXXXXXXX--------- 540
            R+KI+L  RSKQETRELRRKL  EL  VR+LVK++EAK+V G                  
Sbjct: 143  RIKINLATRSKQETRELRRKLQTELDLVRSLVKKIEAKDVLGSEGGVVDDSVAKRVSSEV 202

Query: 541  -------------QLCVSVMSNDAG----VEKEKRTPKANQFYRSNDFLLGKEKFPPIDS 669
                         QL +SV+ N  G    VEKEKRTPKANQFYR+++FLLGKEKFP  +S
Sbjct: 203  ASAKSLSQSRPLHQLSISVIENSQGGSDVVEKEKRTPKANQFYRNSEFLLGKEKFPT-ES 261

Query: 670  NNIKKSKAKQXXXXXXXXXXXXMDKRMGQVFKSCDALLGRLMKHKHGWVFNTPVDVKALG 849
            N   K   K+                M + FK+C ALL RLMKHKHGWVFN+PVDVK LG
Sbjct: 262  NKKTKLNGKKHGGVEPGYG-----SAMNKCFKNCGALLERLMKHKHGWVFNSPVDVKGLG 316

Query: 850  LHDYYIIIKNPMDLGTVKTRLSKNWYKSPREFAEDVRLTFRNAMTYNPKGQDVHIMAELL 1029
            LHDY+ II +PMDLGTVK+RL+KNWYKSPREFAEDVRLTF NAMTYNPKGQDVH+MAE+L
Sbjct: 317  LHDYFSIITDPMDLGTVKSRLNKNWYKSPREFAEDVRLTFHNAMTYNPKGQDVHVMAEVL 376

Query: 1030 LNMFEEGWTAMQSSHNLNSWIEGGDNEFSLXXXXXXXXXXXXXFQEMRRTLDRSESTNQP 1209
              +FE+ W  +++                                EMRR LDRSES    
Sbjct: 377  SKIFEDKWAVIEAE-------------------KLPAPPPMLPSHEMRRVLDRSESMTYA 417

Query: 1210 DVSKPKPSNVTPTGRIPVPKKPKAKESNKRNMTYEEKQKLSVNLQSLPPEKLDNIVQIIK 1389
               K KP N TP  R P  KKPKAK+ NKR+MT+EEKQKLS NLQ+LP EKLDNIV IIK
Sbjct: 418  VDPKIKPMNYTPLVRTPSLKKPKAKDPNKRDMTFEEKQKLSTNLQNLPSEKLDNIVHIIK 477

Query: 1390 KRNSSLCQRXXXXXXXXXXXXXXTLWELDRFVTYY---XXXXXXXXXVQQSEGEAGHYVQ 1560
            + NS+LCQ               TLWELDR+VT Y            + Q+  EA   +Q
Sbjct: 478  RNNSALCQDNDEIEVDIDSVDAETLWELDRYVTNYKKSLSKNKRKAELAQARAEAARKIQ 537

Query: 1561 EVNLAPAVVEAPKETKPVEEKNVSSSSPVQQEKQG 1665
            E N  P V EA +ET  ++E+N+SSSSPVQ EKQG
Sbjct: 538  ERNPVPVVTEAARETN-IDERNISSSSPVQGEKQG 571


>ref|XP_002276195.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
          Length = 654

 Score =  401 bits (1030), Expect = e-109
 Identities = 237/479 (49%), Positives = 283/479 (59%), Gaps = 53/479 (11%)
 Frame = +1

Query: 388  RVKISLGLRSKQETRELRRKLMNELTQVRNLVKRLEAKEVQGRXXXXXXXX--------- 540
            R+KI+L  RSKQETRELRRKL  EL  VR+LVK++EAK+V G                  
Sbjct: 143  RIKINLATRSKQETRELRRKLQTELDLVRSLVKKIEAKDVLGSEGGVVDDSVAKRVSSEV 202

Query: 541  ----------------------------------QLCVSVMSNDAG----VEKEKRTPKA 606
                                              QL +SV+ N  G    VEKEKRTPKA
Sbjct: 203  ASVNESRPLQQSRPLQQSRSFPQAKSLSQSRPLHQLSISVIENSQGGSDVVEKEKRTPKA 262

Query: 607  NQFYRSNDFLLGKEKFPPIDSNNIKKSKAKQXXXXXXXXXXXXMDKRMGQVFKSCDALLG 786
            NQFYR+++FLLGKEKFP  +SN   K   K+                M + FK+C ALL 
Sbjct: 263  NQFYRNSEFLLGKEKFPT-ESNKKTKLNGKKHGGVEPGYG-----SAMNKCFKNCGALLE 316

Query: 787  RLMKHKHGWVFNTPVDVKALGLHDYYIIIKNPMDLGTVKTRLSKNWYKSPREFAEDVRLT 966
            RLMKHKHGWVFN+PVDVK LGLHDY+ II +PMDLGTVK+RL+KNWYKSPREFAEDVRLT
Sbjct: 317  RLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWYKSPREFAEDVRLT 376

Query: 967  FRNAMTYNPKGQDVHIMAELLLNMFEEGWTAMQSSHNLNSWIEGGDNEFSLXXXXXXXXX 1146
            F NAMTYNPKGQDVH+MAE+L  +FE+ W  +++ ++    + G + E  L         
Sbjct: 377  FHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVIEAEYSRELRL-GYEYEMGLPTPTSRKLP 435

Query: 1147 XXXXF---QEMRRTLDRSESTNQPDVSKPKPSNVTPTGRIPVPKKPKAKESNKRNMTYEE 1317
                     EMRR LDRSES       K KP N TP  R P  KKPKAK+ NKR+MT+EE
Sbjct: 436  APPPMLPSHEMRRVLDRSESMTYAVDPKIKPMNYTPLVRTPSLKKPKAKDPNKRDMTFEE 495

Query: 1318 KQKLSVNLQSLPPEKLDNIVQIIKKRNSSLCQRXXXXXXXXXXXXXXTLWELDRFVTYY- 1494
            KQKLS NLQ+LP EKLDNIV IIK+ NS+LCQ               TLWELDR+VT Y 
Sbjct: 496  KQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDIDSVDAETLWELDRYVTNYK 555

Query: 1495 --XXXXXXXXXVQQSEGEAGHYVQEVNLAPAVVEAPKETKPVEEKNVSSSSPVQQEKQG 1665
                       + Q+  EA   +QE N  P V EA +ET  ++E+N+SSSSPVQ EKQG
Sbjct: 556  KSLSKNKRKAELAQARAEAARKIQERNPVPVVTEAARETN-IDERNISSSSPVQGEKQG 613


>emb|CAN67478.1| hypothetical protein VITISV_035453 [Vitis vinifera]
          Length = 660

 Score =  401 bits (1030), Expect = e-109
 Identities = 237/479 (49%), Positives = 283/479 (59%), Gaps = 53/479 (11%)
 Frame = +1

Query: 388  RVKISLGLRSKQETRELRRKLMNELTQVRNLVKRLEAKEVQGRXXXXXXXX--------- 540
            R+KI+L  RSKQETRELRRKL  EL  VR+LVK++EAK+V G                  
Sbjct: 143  RIKINLATRSKQETRELRRKLQTELDLVRSLVKKIEAKDVLGSEGGVVDDSVAKRVSSEV 202

Query: 541  ----------------------------------QLCVSVMSNDAG----VEKEKRTPKA 606
                                              QL +SV+ N  G    VEKEKRTPKA
Sbjct: 203  ASVNESRPLQQSRPLQQSRSFPQAKSLSQSRPLHQLSISVIENSQGGSDVVEKEKRTPKA 262

Query: 607  NQFYRSNDFLLGKEKFPPIDSNNIKKSKAKQXXXXXXXXXXXXMDKRMGQVFKSCDALLG 786
            NQFYR+++FLLGKEKFP  +SN   K   K+                M + FK+C ALL 
Sbjct: 263  NQFYRNSEFLLGKEKFPT-ESNKKTKLNGKKHGGVEPGYG-----SAMNKCFKNCGALLE 316

Query: 787  RLMKHKHGWVFNTPVDVKALGLHDYYIIIKNPMDLGTVKTRLSKNWYKSPREFAEDVRLT 966
            RLMKHKHGWVFN+PVDVK LGLHDY+ II +PMDLGTVK+RL+KNWYKSPREFAEDVRLT
Sbjct: 317  RLMKHKHGWVFNSPVDVKGLGLHDYFSIITDPMDLGTVKSRLNKNWYKSPREFAEDVRLT 376

Query: 967  FRNAMTYNPKGQDVHIMAELLLNMFEEGWTAMQSSHNLNSWIEGGDNEFSLXXXXXXXXX 1146
            F NAMTYNPKGQDVH+MAE+L  +FE+ W  +++ ++    + G + E  L         
Sbjct: 377  FHNAMTYNPKGQDVHVMAEVLSKIFEDKWAVIEAEYSRELRL-GYEYEMGLPTPTSRKLP 435

Query: 1147 XXXXF---QEMRRTLDRSESTNQPDVSKPKPSNVTPTGRIPVPKKPKAKESNKRNMTYEE 1317
                     EMRR LDRSES       K KP N TP  R P  KKPKAK+ NKR+MT+EE
Sbjct: 436  APPPMLPSHEMRRVLDRSESMTYAVDPKIKPMNYTPLVRTPSLKKPKAKDPNKRDMTFEE 495

Query: 1318 KQKLSVNLQSLPPEKLDNIVQIIKKRNSSLCQRXXXXXXXXXXXXXXTLWELDRFVTYY- 1494
            KQKLS NLQ+LP EKLDNIV IIK+ NS+LCQ               TLWELDR+VT Y 
Sbjct: 496  KQKLSTNLQNLPSEKLDNIVHIIKRNNSALCQDNDEIEVDIDSVDAETLWELDRYVTNYK 555

Query: 1495 --XXXXXXXXXVQQSEGEAGHYVQEVNLAPAVVEAPKETKPVEEKNVSSSSPVQQEKQG 1665
                       + Q+  EA   +QE N  P V EA +ET  ++E+N+SSSSPVQ EKQG
Sbjct: 556  KSLSKNKRKAELAQARAEAARKIQERNPVPVVTEAARETN-IDERNISSSSPVQGEKQG 613


>ref|XP_002525131.1| bromodomain-containing protein, putative [Ricinus communis]
            gi|223535590|gb|EEF37258.1| bromodomain-containing
            protein, putative [Ricinus communis]
          Length = 742

 Score =  395 bits (1014), Expect = e-107
 Identities = 252/577 (43%), Positives = 311/577 (53%), Gaps = 79/577 (13%)
 Frame = +1

Query: 172  DSKKVYTRKVLNKTSSNNK-----------PSEEDGNLSQKQLLARLDXXXXXXTEEVVV 318
            D  +   +  +NK   NNK           P+ ED N +Q+Q ++RL+            
Sbjct: 147  DDNRDNEKNKINKDERNNKSNSIQVPESQTPALEDTNSAQQQPVSRLE------------ 194

Query: 319  AXXXXXXXINRRQKMV-LLPNGYT--------------RVKISLGLRSKQETRELRRKLM 453
            A       +NR+Q    + P+G                +VKI+L  +SKQE +ELRRKL 
Sbjct: 195  ANSDDSSSLNRQQGAAEVAPSGRDATAENGVVKQGLNDKVKINLASKSKQEMKELRRKLE 254

Query: 454  NELTQVRNLVKRLEA-------------------------KEVQGRXXXXXXXX------ 540
            +EL  VR+LVK++EA                         K V                 
Sbjct: 255  SELDMVRSLVKKIEAKEVQLGVSELSNLQVSLNDRVYNGLKRVNSEVVSVGLSHDITTPI 314

Query: 541  ------------QLCVSVMSNDAG----VEKEKRTPKANQFYRSNDFLLGKEKFPPIDSN 672
                        QL +SV  N  G    VEKEKRTPKANQFYR+++FLL K+KFPP +SN
Sbjct: 315  ATPTPRQSRPLNQLSISVFENSQGAVENVEKEKRTPKANQFYRNSEFLLAKDKFPPAESN 374

Query: 673  NIKKSKAKQXXXXXXXXXXXXMDKRMGQVFKSCDALLGRLMKHKHGWVFNTPVDVKALGL 852
               K   K+              K    +FK+C ALL +LMKHK+GWVF +PVDVK LGL
Sbjct: 375  KKSKLNGKKQGGGDMGFGFGAASK----IFKNCSALLEKLMKHKYGWVFKSPVDVKGLGL 430

Query: 853  HDYYIIIKNPMDLGTVKTRLSKNWYKSPREFAEDVRLTFRNAMTYNPKGQDVHIMAELLL 1032
            HDY+ IIK+PMDLGTVKTRL+KNWYKSP EFAEDVRLTF NAM YNPKGQDVH+MAE+LL
Sbjct: 431  HDYFTIIKHPMDLGTVKTRLNKNWYKSPEEFAEDVRLTFHNAMRYNPKGQDVHVMAEILL 490

Query: 1033 NMFEEGWTAMQSSHNLNSWIEGGDNEFSLXXXXXXXXXXXXXFQEMRRTLDRSESTN-QP 1209
             +FE+ W  ++S  +       G     +               +MRR LDRS+S   QP
Sbjct: 491  KLFEDRWVVIKSEFDREMRFVVGCG-IGIPTPTSRKAPLPPPPLDMRRILDRSDSMRYQP 549

Query: 1210 DVSKPKPSNVTPTGRIPVPKKPKAKESNKRNMTYEEKQKLSVNLQSLPPEKLDNIVQIIK 1389
               + KP + TP+GR P PKKPKAK+ +KR+MTY+EKQKLS NLQSLP EKLDNIVQIIK
Sbjct: 550  IDPRSKPISTTPSGRTPAPKKPKAKDPHKRDMTYDEKQKLSTNLQSLPSEKLDNIVQIIK 609

Query: 1390 KRNSSLCQRXXXXXXXXXXXXXXTLWELDRFVTYY----XXXXXXXXXVQQSEGEAGHYV 1557
            KRNSSL Q               TLWELDRFVT Y               Q+  EA   V
Sbjct: 610  KRNSSLSQHDDEIEVDIDSVDAETLWELDRFVTNYKKSLSKNKRKAELASQARAEAERNV 669

Query: 1558 QEVNL-APAVVEAPKETKPVEEKNVSSSSPVQQEKQG 1665
            QE +L  PA V AP +    +E+NVS+SSPVQ E QG
Sbjct: 670  QEKSLQTPAAVVAPPQGTKTDERNVSTSSPVQVENQG 706


>ref|XP_002283002.1| PREDICTED: transcription factor GTE4-like [Vitis vinifera]
          Length = 597

 Score =  383 bits (983), Expect = e-103
 Identities = 253/574 (44%), Positives = 307/574 (53%), Gaps = 63/574 (10%)
 Frame = +1

Query: 142  GNGEKQHKWADSKKVYTRKVLNKTSSNNKPSE------------------EDGNLSQKQL 267
            G+  ++ KWA+S KVY RK  NK    N  S                   ED N  Q Q 
Sbjct: 11   GDSREKQKWAESGKVYKRKNHNKGIKINNESSIINNNVAQQSSQTLATTTEDANSLQPQA 70

Query: 268  LARLDXXXXXXTEEVVVAXXXXXXXINRRQKMV---LLPNGYTRVKI---SLGLRSKQET 429
            L+R D      +     A        N R+ M    + P      KI   S+ +RSK E 
Sbjct: 71   LSRFDAASDDSSSHTPPAE-------NGRENMNGNGVKPEDPNVEKIRFRSISMRSKVEK 123

Query: 430  RELRRKLMNELTQVRNLVKRLEAKE----------VQGRXXXXXXXXQL----------- 546
            R+LRRKL+ EL QVR+L K+L+  +          V G          L           
Sbjct: 124  RDLRRKLLGELDQVRSLAKKLDTNDGQLSGYAHSQVSGNDGLDRGGGALRVNSEVGSVGV 183

Query: 547  ---------CVSVMSNDAG----VEKEKRTPKANQFYRSNDFLLGKEKFPPIDSNNIKKS 687
                      VSVM N  G    VEKEKRTPKAN++Y++ DF+LGK+K PP +SN   KS
Sbjct: 184  QDSRPFRGLSVSVMGNSHGIGEFVEKEKRTPKANKYYQNPDFVLGKDKLPPPESNKKPKS 243

Query: 688  KAKQXXXXXXXXXXXXMDKRMGQVFKSCDALLGRLMKHKHGWVFNTPVDVKALGLHDYYI 867
                            +DK + Q FK+C  LL +LMKHKHGWVFN PVDVK LGLHDYY 
Sbjct: 244  NG------------VGIDKYVAQAFKNCSNLLAKLMKHKHGWVFNNPVDVKGLGLHDYYS 291

Query: 868  IIKNPMDLGTVKTRLSKNWYKSPREFAEDVRLTFRNAMTYNPKGQDVHIMAELLLNMFEE 1047
            IIK+PMD GTVK+RLSKNWYKSPREFAEDVRLT +NAMTYNPKGQDVH MAE LL +FEE
Sbjct: 292  IIKHPMDFGTVKSRLSKNWYKSPREFAEDVRLTLQNAMTYNPKGQDVHCMAEELLKIFEE 351

Query: 1048 GWTAMQSSHNLNSWIEG-GDNEFSLXXXXXXXXXXXXXFQEMRRTLDRSESTNQPDVSKP 1224
             W A+++      W  G G +  +                   RT+DRS S   P  S  
Sbjct: 352  KWAAIEAD---LYWRFGMGHDAGTPTPTSRKAPYLHHHHSPEMRTVDRSGSMAMPIDSNL 408

Query: 1225 KPSNVTPTGRIPVPKKPKAKESNKRNMTYEEKQKLSVNLQSLPPEKLDNIVQIIKKRNSS 1404
            KP N     R+PVPKKPKAK+ +KR+MTYEEKQKLS NLQSLP EKLD+IVQIIKKRNS+
Sbjct: 409  KPGNFAHM-RMPVPKKPKAKDPHKRDMTYEEKQKLSSNLQSLPSEKLDHIVQIIKKRNSA 467

Query: 1405 LCQRXXXXXXXXXXXXXXTLWELDRFVTYY----XXXXXXXXXVQQSEGEAGHYVQEVNL 1572
            + Q+              TLWELDR+VT Y               Q+   + H +QE+  
Sbjct: 468  VSQQDDEIEVDIDSVDAETLWELDRYVTNYKKSLSKNKRKAELAFQARANSDHNIQEMYS 527

Query: 1573 APAVVEAPKETKPVEEKNVSSSSPVQQEKQGVHA 1674
            + A   APKETK   E    S+SP+Q EKQG +A
Sbjct: 528  SSATAGAPKETKSDGEH--VSASPIQAEKQGDNA 559


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