BLASTX nr result

ID: Coptis21_contig00002162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002162
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509486.1| NADH-ubiquinone oxidoreductase 1, chain, put...   374   e-101
ref|NP_001236536.1| uncharacterized protein LOC100499826 [Glycin...   374   e-101
ref|NP_001238086.1| uncharacterized protein LOC100306645 [Glycin...   372   e-101
ref|XP_004150417.1| PREDICTED: NADH dehydrogenase [ubiquinone] i...   369   e-100
ref|XP_003636504.1| NADH-quinone oxidoreductase subunit I [Medic...   365   6e-99

>ref|XP_002509486.1| NADH-ubiquinone oxidoreductase 1, chain, putative [Ricinus
           communis] gi|223549385|gb|EEF50873.1| NADH-ubiquinone
           oxidoreductase 1, chain, putative [Ricinus communis]
          Length = 222

 Score =  374 bits (961), Expect = e-101
 Identities = 186/224 (83%), Positives = 198/224 (88%)
 Frame = +2

Query: 29  MAALLARKSILALRARQQKLSGVGQSFQGSYQNALRITSHPFSTQKEDEEREQLTREISK 208
           MAA+LARKS+ AL ARQ  +SG  Q  QGS Q ALR ++H +ST+KEDEEREQL+RE+SK
Sbjct: 1   MAAILARKSLAALTARQLAVSG--QLLQGSNQYALRSSAHLYSTRKEDEEREQLSREMSK 58

Query: 209 DWSTVFERTINTLFLTEMVRGLMLTLKYFFEPKVTINYPFEKGPLSPRFRGEHALRRYPT 388
           DWS++FER+INTLFLTEMVRGL LTLKYFFE KVTINYPFEKGPLSPRFRGEHALRRYPT
Sbjct: 59  DWSSIFERSINTLFLTEMVRGLSLTLKYFFEKKVTINYPFEKGPLSPRFRGEHALRRYPT 118

Query: 389 GEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 568
           GEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV
Sbjct: 119 GEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 178

Query: 569 EGPNFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESLYR 700
           EGPNFEFATETH            NGDRWETEIAENLRSESLYR
Sbjct: 179 EGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 222


>ref|NP_001236536.1| uncharacterized protein LOC100499826 [Glycine max]
           gi|255626927|gb|ACU13808.1| unknown [Glycine max]
          Length = 222

 Score =  374 bits (960), Expect = e-101
 Identities = 184/224 (82%), Positives = 196/224 (87%)
 Frame = +2

Query: 29  MAALLARKSILALRARQQKLSGVGQSFQGSYQNALRITSHPFSTQKEDEEREQLTREISK 208
           MAA+LARKS+LALRARQ  +SG  Q    S     R+++H +ST++EDEEREQL +EISK
Sbjct: 1   MAAILARKSLLALRARQLAVSG--QGLHSSQNYGFRLSAHSYSTKREDEEREQLAKEISK 58

Query: 209 DWSTVFERTINTLFLTEMVRGLMLTLKYFFEPKVTINYPFEKGPLSPRFRGEHALRRYPT 388
           DWS+VFER+INTLFLTEMVRGLMLTLKYFFE KVTINYPFEKGPLSPRFRGEHALRRYPT
Sbjct: 59  DWSSVFERSINTLFLTEMVRGLMLTLKYFFETKVTINYPFEKGPLSPRFRGEHALRRYPT 118

Query: 389 GEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 568
           GEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV
Sbjct: 119 GEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 178

Query: 569 EGPNFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESLYR 700
           EGPNFEFATETH            NGDRWETEIAENLRSESLYR
Sbjct: 179 EGPNFEFATETHDELLYDKEKLLENGDRWETEIAENLRSESLYR 222


>ref|NP_001238086.1| uncharacterized protein LOC100306645 [Glycine max]
           gi|255629169|gb|ACU14929.1| unknown [Glycine max]
          Length = 222

 Score =  372 bits (956), Expect = e-101
 Identities = 184/224 (82%), Positives = 196/224 (87%)
 Frame = +2

Query: 29  MAALLARKSILALRARQQKLSGVGQSFQGSYQNALRITSHPFSTQKEDEEREQLTREISK 208
           MAA+LARKS+LALRARQ  +SG  Q    S    LR+++H FST++EDEEREQL ++ISK
Sbjct: 1   MAAILARKSLLALRARQLAVSG--QGLHSSQYYGLRLSAHSFSTKREDEEREQLAKDISK 58

Query: 209 DWSTVFERTINTLFLTEMVRGLMLTLKYFFEPKVTINYPFEKGPLSPRFRGEHALRRYPT 388
           DWS+VFER+INTLFLTEMVRGLMLTLKYFFE KVTINYPFEKGPLSPRFRGEHALRRYPT
Sbjct: 59  DWSSVFERSINTLFLTEMVRGLMLTLKYFFETKVTINYPFEKGPLSPRFRGEHALRRYPT 118

Query: 389 GEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 568
           GEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACP DAIV
Sbjct: 119 GEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPGDAIV 178

Query: 569 EGPNFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESLYR 700
           EGPNFEFATETH            NGDRWETEIAENLRSESLYR
Sbjct: 179 EGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 222


>ref|XP_004150417.1| PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 8-B,
           mitochondrial-like isoform 1 [Cucumis sativus]
           gi|449525518|ref|XP_004169764.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] iron-sulfur protein 8-B,
           mitochondrial-like isoform 1 [Cucumis sativus]
          Length = 221

 Score =  369 bits (947), Expect = e-100
 Identities = 185/224 (82%), Positives = 197/224 (87%)
 Frame = +2

Query: 29  MAALLARKSILALRARQQKLSGVGQSFQGSYQNALRITSHPFSTQKEDEEREQLTREISK 208
           MAA+LARKS+LALRARQ  +SG  Q+ QGS  + L+ T H +ST K+DEEREQL +EISK
Sbjct: 1   MAAILARKSLLALRARQLAVSG--QALQGSPFHGLQST-HLYSTSKDDEEREQLAKEISK 57

Query: 209 DWSTVFERTINTLFLTEMVRGLMLTLKYFFEPKVTINYPFEKGPLSPRFRGEHALRRYPT 388
           DWS++FER+INTLFLTEMVRGL LTLKYFFE KVTINYPFEKGPLSPRFRGEHALRRYPT
Sbjct: 58  DWSSIFERSINTLFLTEMVRGLSLTLKYFFEKKVTINYPFEKGPLSPRFRGEHALRRYPT 117

Query: 389 GEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 568
           GEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV
Sbjct: 118 GEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIV 177

Query: 569 EGPNFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESLYR 700
           EGPNFEFATETH            NGDRWETEIAENLRSESLYR
Sbjct: 178 EGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 221


>ref|XP_003636504.1| NADH-quinone oxidoreductase subunit I [Medicago truncatula]
           gi|355502439|gb|AES83642.1| NADH-quinone oxidoreductase
           subunit I [Medicago truncatula]
          Length = 242

 Score =  365 bits (938), Expect = 6e-99
 Identities = 179/225 (79%), Positives = 194/225 (86%)
 Frame = +2

Query: 26  QMAALLARKSILALRARQQKLSGVGQSFQGSYQNALRITSHPFSTQKEDEEREQLTREIS 205
           +MAA LARKS+LALR RQ  L+  GQ    +    +R++SH +ST+ EDEERE+L +EIS
Sbjct: 20  EMAAFLARKSLLALRTRQ--LAVAGQGLHNTQNYGMRLSSHLYSTKLEDEEREKLAKEIS 77

Query: 206 KDWSTVFERTINTLFLTEMVRGLMLTLKYFFEPKVTINYPFEKGPLSPRFRGEHALRRYP 385
           KDWSTVFER+INTLFLTE+VRGLMLTLKYFF+  VTINYPFEKGPLSPRFRGEHALRRYP
Sbjct: 78  KDWSTVFERSINTLFLTELVRGLMLTLKYFFDKNVTINYPFEKGPLSPRFRGEHALRRYP 137

Query: 386 TGEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 565
           TGEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI
Sbjct: 138 TGEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 197

Query: 566 VEGPNFEFATETHXXXXXXXXXXXXNGDRWETEIAENLRSESLYR 700
           VEGPNFEF+TETH            NGDRWETEIAENLRSESLYR
Sbjct: 198 VEGPNFEFSTETHEELLYDKEKLLENGDRWETEIAENLRSESLYR 242


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