BLASTX nr result
ID: Coptis21_contig00002139
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00002139
(1608 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002516257.1| Methylthioribose-1-phosphate isomerase, puta... 530 e-148
ref|XP_004144039.1| PREDICTED: methylthioribose-1-phosphate isom... 529 e-148
sp|Q948X8.1|MTNA_TOBAC RecName: Full=Methylthioribose-1-phosphat... 522 e-146
ref|XP_002308521.1| predicted protein [Populus trichocarpa] gi|3... 520 e-145
emb|CBI27788.3| unnamed protein product [Vitis vinifera] 510 e-142
>ref|XP_002516257.1| Methylthioribose-1-phosphate isomerase, putative [Ricinus communis]
gi|313471351|sp|B9RR88.1|MTNA_RICCO RecName:
Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|223544743|gb|EEF46259.1| Methylthioribose-1-phosphate
isomerase, putative [Ricinus communis]
Length = 382
Score = 530 bits (1364), Expect = e-148
Identities = 266/362 (73%), Positives = 307/362 (84%)
Frame = +1
Query: 241 LQAICYKRGSLRLLDQTKLPHESTYLDVRNATDGWNTIRDMVVRGAPXXXXXXXXXXXVE 420
LQ+ICY RGSL+LLDQ KLP E+ +LD+RN++DGW+ IR+MVVRGAP VE
Sbjct: 17 LQSICYNRGSLKLLDQRKLPLETEFLDIRNSSDGWSAIREMVVRGAPAIAIAAALSLAVE 76
Query: 421 VFNMEPFVGTSENAASFLFNKLDYLVSSRPTAVNLSDAAVKLKDVITKSAASSGDAKSVF 600
VFN + F GTS +AASFLF KL+YLVSSRPTAVNLSDAA KLK+VI K+AA++ D+ SVF
Sbjct: 77 VFNFDDFTGTSNDAASFLFKKLEYLVSSRPTAVNLSDAANKLKEVIYKAAATASDSNSVF 136
Query: 601 QAYIEAAEIMLEDDVASNKAIGSYGANFIKNTLKDSKNISILTHCNTGSLATAGYGTALG 780
QAYIEAAEIML+DD+ASNKAIGS+GA+FI+N LK+ + +SILTHCNTGSLATAGYGTALG
Sbjct: 137 QAYIEAAEIMLKDDIASNKAIGSHGASFIQNQLKNPQRLSILTHCNTGSLATAGYGTALG 196
Query: 781 VIRALHTDGVLEKAFCTETRPFNQGSRLTAFEFVHDKIPXXXXXXXXXXXLMKTGRVNAV 960
VIRALH GVL +A+CTETRPFNQGSRLTAFE VH+KIP LMK +V+AV
Sbjct: 197 VIRALHAAGVLRRAYCTETRPFNQGSRLTAFELVHEKIPATLVADSAAAALMKDDQVSAV 256
Query: 961 IVGADRVAANGDTANKIGTYSLALCALHHGIPFFVAAPVTSIDLALSSGKEIVIEERSPK 1140
IVGADRVAANGDTANKIGTYSLALCA+HH IPF+VAAP+TS+DL+LSSGK IVIEERSPK
Sbjct: 257 IVGADRVAANGDTANKIGTYSLALCAMHHNIPFYVAAPLTSVDLSLSSGKHIVIEERSPK 316
Query: 1141 ELLNSRGGLGEQVAASGISVWNPAFDVTPANIITAIVTEKGVITKTGSDAFDINNFIQKA 1320
ELLNSRGGLGEQVAASGISVWNPAFDVTPAN+I+ I+TEKGVITK S FDI NF+++
Sbjct: 317 ELLNSRGGLGEQVAASGISVWNPAFDVTPANLISGIITEKGVITKIDSSDFDIKNFVKRT 376
Query: 1321 NG 1326
G
Sbjct: 377 AG 378
>ref|XP_004144039.1| PREDICTED: methylthioribose-1-phosphate isomerase-like [Cucumis
sativus]
Length = 395
Score = 529 bits (1363), Expect = e-148
Identities = 265/363 (73%), Positives = 306/363 (84%)
Frame = +1
Query: 238 ALQAICYKRGSLRLLDQTKLPHESTYLDVRNATDGWNTIRDMVVRGAPXXXXXXXXXXXV 417
+LQ+ICYKRGSLRLLDQ KLP E+ YLD+++ATDGW+ IRDMVVRGAP
Sbjct: 30 SLQSICYKRGSLRLLDQRKLPLETVYLDIKDATDGWHAIRDMVVRGAPAIAISAALALAA 89
Query: 418 EVFNMEPFVGTSENAASFLFNKLDYLVSSRPTAVNLSDAAVKLKDVITKSAASSGDAKSV 597
EV N PF GT +AASF+ +KLDYLVSSRPTAVNL DAA+KLK++++++AA S +A SV
Sbjct: 90 EVNNSAPFNGTPNDAASFIADKLDYLVSSRPTAVNLGDAAIKLKEIVSRAAAISSEASSV 149
Query: 598 FQAYIEAAEIMLEDDVASNKAIGSYGANFIKNTLKDSKNISILTHCNTGSLATAGYGTAL 777
FQA+IEAAE MLEDDVASNKAIG YGAN+I++ K + S+LTHCNTGSLATAGYGTAL
Sbjct: 150 FQAFIEAAEAMLEDDVASNKAIGLYGANYIRDQQKSLEKFSVLTHCNTGSLATAGYGTAL 209
Query: 778 GVIRALHTDGVLEKAFCTETRPFNQGSRLTAFEFVHDKIPXXXXXXXXXXXLMKTGRVNA 957
GVIRALH+ GVLE+A+CTETRPFNQGSRLTA+E VH+KIP LMK GRVNA
Sbjct: 210 GVIRALHSAGVLERAYCTETRPFNQGSRLTAYELVHEKIPSTLIADSAAAALMKFGRVNA 269
Query: 958 VIVGADRVAANGDTANKIGTYSLALCALHHGIPFFVAAPVTSIDLALSSGKEIVIEERSP 1137
V+VGADRVAANGDTANKIGTYSLALCA+HH IPFFVAAP+TSIDL+LSSG+EIVIEERSP
Sbjct: 270 VVVGADRVAANGDTANKIGTYSLALCAMHHKIPFFVAAPLTSIDLSLSSGEEIVIEERSP 329
Query: 1138 KELLNSRGGLGEQVAASGISVWNPAFDVTPANIITAIVTEKGVITKTGSDAFDINNFIQK 1317
KELLNSRGGLGEQVAASGI+VWNPAFDVTPA++I I+TEKGVITK GSD+F+I F+QK
Sbjct: 330 KELLNSRGGLGEQVAASGIAVWNPAFDVTPAHLICGIITEKGVITKAGSDSFNIKEFVQK 389
Query: 1318 ANG 1326
G
Sbjct: 390 TAG 392
>sp|Q948X8.1|MTNA_TOBAC RecName: Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|15216226|dbj|BAB63262.1| CIG2 [Nicotiana tabacum]
Length = 374
Score = 522 bits (1345), Expect = e-146
Identities = 263/362 (72%), Positives = 305/362 (84%)
Frame = +1
Query: 241 LQAICYKRGSLRLLDQTKLPHESTYLDVRNATDGWNTIRDMVVRGAPXXXXXXXXXXXVE 420
L +ICY RGSL+LLDQ KLP E+ YLD+++ DGW+ I++MVVRGAP VE
Sbjct: 11 LLSICYNRGSLQLLDQRKLPLETIYLDIQDTKDGWDAIKEMVVRGAPAIAIAAALSLAVE 70
Query: 421 VFNMEPFVGTSENAASFLFNKLDYLVSSRPTAVNLSDAAVKLKDVITKSAASSGDAKSVF 600
V N+ F GTS++A+ FL NKLDYLVSSRPTAVNLSDAAVKLK+VI K+A ++ DA SVF
Sbjct: 71 VSNLSSFDGTSDDASDFLSNKLDYLVSSRPTAVNLSDAAVKLKEVIKKAATTAKDANSVF 130
Query: 601 QAYIEAAEIMLEDDVASNKAIGSYGANFIKNTLKDSKNISILTHCNTGSLATAGYGTALG 780
QAYIEAAE+MLEDDV SNKAIGSYGA+F+K L DS+ I+ILTHCNTGSLATAGYGTALG
Sbjct: 131 QAYIEAAEVMLEDDVTSNKAIGSYGASFLKEHLTDSQKITILTHCNTGSLATAGYGTALG 190
Query: 781 VIRALHTDGVLEKAFCTETRPFNQGSRLTAFEFVHDKIPXXXXXXXXXXXLMKTGRVNAV 960
VIRAL+TDGVLE+AFCTETRPFNQGSRLTAFE VH+ IP LM GRV AV
Sbjct: 191 VIRALYTDGVLERAFCTETRPFNQGSRLTAFELVHENIPATLIADSAAAALMNAGRVKAV 250
Query: 961 IVGADRVAANGDTANKIGTYSLALCALHHGIPFFVAAPVTSIDLALSSGKEIVIEERSPK 1140
IVGADRVAANGDTANKIGTY+LA+ A+HHGIPF+VAAP+TSIDL+LSSG+EIVIEERSPK
Sbjct: 251 IVGADRVAANGDTANKIGTYNLAVSAMHHGIPFYVAAPLTSIDLSLSSGQEIVIEERSPK 310
Query: 1141 ELLNSRGGLGEQVAASGISVWNPAFDVTPANIITAIVTEKGVITKTGSDAFDINNFIQKA 1320
ELL++RGGLGEQVAASGISVWNPAFDVTPAN+I+ I+TEKGVITK G++ FDI F++K
Sbjct: 311 ELLHTRGGLGEQVAASGISVWNPAFDVTPANLISGIITEKGVITKKGAETFDIAEFVRKT 370
Query: 1321 NG 1326
+G
Sbjct: 371 SG 372
>ref|XP_002308521.1| predicted protein [Populus trichocarpa]
gi|313471349|sp|B9HCR2.1|MTNA_POPTR RecName:
Full=Methylthioribose-1-phosphate isomerase; Short=M1Pi;
Short=MTR-1-P isomerase; AltName:
Full=S-methyl-5-thioribose-1-phosphate isomerase;
AltName: Full=Translation initiation factor eIF-2B
subunit alpha/beta/delta-like protein
gi|222854497|gb|EEE92044.1| predicted protein [Populus
trichocarpa]
Length = 384
Score = 520 bits (1339), Expect = e-145
Identities = 261/359 (72%), Positives = 302/359 (84%)
Frame = +1
Query: 241 LQAICYKRGSLRLLDQTKLPHESTYLDVRNATDGWNTIRDMVVRGAPXXXXXXXXXXXVE 420
LQ+ICY RGSL+LLDQ KLP E+TYLD+++A+DGW IR+MVVRGAP VE
Sbjct: 15 LQSICYHRGSLKLLDQRKLPLETTYLDIKDASDGWLAIREMVVRGAPAIAISAALSLAVE 74
Query: 421 VFNMEPFVGTSENAASFLFNKLDYLVSSRPTAVNLSDAAVKLKDVITKSAASSGDAKSVF 600
V N+E F GT AASFL KLDYLVSSRPTAVNLSDAA KLK+V++K+AA++ + +SVF
Sbjct: 75 VSNLENFNGTPVEAASFLAGKLDYLVSSRPTAVNLSDAATKLKEVVSKAAAAASNCQSVF 134
Query: 601 QAYIEAAEIMLEDDVASNKAIGSYGANFIKNTLKDSKNISILTHCNTGSLATAGYGTALG 780
QAYIEAAEIML DDVASNKAIGSYGA FI+N KD +S+LTHCNTGSLATAGYGTALG
Sbjct: 135 QAYIEAAEIMLADDVASNKAIGSYGARFIQNQQKDPTKLSVLTHCNTGSLATAGYGTALG 194
Query: 781 VIRALHTDGVLEKAFCTETRPFNQGSRLTAFEFVHDKIPXXXXXXXXXXXLMKTGRVNAV 960
VIRALH +GVL++A+CTETRPFNQGSRLTAFE VH+KIP LMK +V+AV
Sbjct: 195 VIRALHGEGVLQRAYCTETRPFNQGSRLTAFELVHEKIPATLIADSAAAALMKDSKVSAV 254
Query: 961 IVGADRVAANGDTANKIGTYSLALCALHHGIPFFVAAPVTSIDLALSSGKEIVIEERSPK 1140
+VGADRVAANGDTANKIGTYSLALCA+HH IPF+VAAP+TS D +LSSGKEI+IEERSPK
Sbjct: 255 VVGADRVAANGDTANKIGTYSLALCAMHHNIPFYVAAPLTSFDSSLSSGKEIIIEERSPK 314
Query: 1141 ELLNSRGGLGEQVAASGISVWNPAFDVTPANIITAIVTEKGVITKTGSDAFDINNFIQK 1317
E+LN+RGGLGEQVAASGISVWNPAFDVTPA++I+ I+TEKGVITKTG D FDI +FI +
Sbjct: 315 EMLNARGGLGEQVAASGISVWNPAFDVTPASLISGIITEKGVITKTGMDDFDIKDFINR 373
>emb|CBI27788.3| unnamed protein product [Vitis vinifera]
Length = 418
Score = 510 bits (1313), Expect = e-142
Identities = 261/367 (71%), Positives = 305/367 (83%), Gaps = 2/367 (0%)
Frame = +1
Query: 238 ALQAICYKRGSLRLLDQTKLPHESTYLDVRNATDGWNTIRDMVVRGAPXXXXXXXXXXXV 417
+LQ+ICYKRGSL+LLDQ KLP E+ YL+++ A DGW+ IRDMVVRGAP V
Sbjct: 53 SLQSICYKRGSLQLLDQRKLPLETVYLEIKGADDGWHAIRDMVVRGAPAIAIAAALSLAV 112
Query: 418 EVFNMEPFVGTSENAASFLFNKLDYLVSSRPTAVNLSDAAVKLKDVITKSAASSGDAKSV 597
EV N+E F+GTS++AASFL +KLDYLV+SRPTAVNLSDA KLK VI+ +AA++ +A SV
Sbjct: 113 EVSNLEDFIGTSDDAASFLNSKLDYLVTSRPTAVNLSDAVTKLKGVISNAAATAFEAMSV 172
Query: 598 FQAYIEAAEIMLEDDVASNKAIGSYGANFIKNTLKDSKNISILTHCNTGSLATAGYGTAL 777
FQA++EAAE ML +DVA+N+AIG YGA+F+++ +KDSKN+SILTHCNTGSLATAGYGTAL
Sbjct: 173 FQAFLEAAEDMLREDVAANRAIGLYGASFLQSHIKDSKNLSILTHCNTGSLATAGYGTAL 232
Query: 778 GVIRALHTDGVLEKAFCTETRPFNQGSRLTAFEFVHDKIPXXXXXXXXXXXLMKTGRVNA 957
GVIR++H +G+L +A+CTETRPFNQGSRLTAFE VHD IP LM+ GRV+A
Sbjct: 233 GVIRSVHAEGILLRAYCTETRPFNQGSRLTAFELVHDNIPATLIADSAAAALMQAGRVDA 292
Query: 958 VIVGADRVAANGDTANKIGTYSLALCALHHGIPFFVAAPVTSIDLALSSGKEIVIEERSP 1137
VIVGADRVAANGDTANKIGTYSLAL A HH IPFFVAAP+TSIDL LSSG+EIVIEERSP
Sbjct: 293 VIVGADRVAANGDTANKIGTYSLALSAKHHHIPFFVAAPLTSIDLTLSSGQEIVIEERSP 352
Query: 1138 KELLNSRGGLGEQVAASGISVWNPAFDVTPANIITAIVTEKGVITKTGSDAFDINNFIQK 1317
KELLNSRGGLGEQVAASGI VWNPAFDVTPA++I I+TEKGVITKTG D FDI +FI
Sbjct: 353 KELLNSRGGLGEQVAASGICVWNPAFDVTPADLIAGIITEKGVITKTG-DVFDIKDFIHN 411
Query: 1318 ANG--CK 1332
A CK
Sbjct: 412 ATSHCCK 418