BLASTX nr result
ID: Coptis21_contig00002134
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00002134 (401 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632356.1| PREDICTED: uncharacterized protein LOC100854... 83 3e-14 emb|CAN77097.1| hypothetical protein VITISV_002769 [Vitis vinifera] 82 6e-14 ref|XP_002520763.1| conserved hypothetical protein [Ricinus comm... 75 7e-12 ref|XP_002306767.1| predicted protein [Populus trichocarpa] gi|2... 73 3e-11 gb|AFK44119.1| unknown [Medicago truncatula] 70 1e-10 >ref|XP_003632356.1| PREDICTED: uncharacterized protein LOC100854564 [Vitis vinifera] Length = 70 Score = 82.8 bits (203), Expect = 3e-14 Identities = 42/68 (61%), Positives = 48/68 (70%), Gaps = 8/68 (11%) Frame = +1 Query: 4 MGSSAKVNSFKSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDPTRDPDD------- 162 MG S + KS +VV GALAFGWL IE+A KPFL+KAR A+DKSDPTRDPDD Sbjct: 1 MGKSTEAGPLKSVMVVFGALAFGWLAIELAFKPFLDKARSALDKSDPTRDPDDDEDGGTT 60 Query: 163 -KSSSDED 183 KS SDE+ Sbjct: 61 QKSLSDEE 68 >emb|CAN77097.1| hypothetical protein VITISV_002769 [Vitis vinifera] Length = 70 Score = 81.6 bits (200), Expect = 6e-14 Identities = 40/60 (66%), Positives = 45/60 (75%) Frame = +1 Query: 4 MGSSAKVNSFKSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDPTRDPDDKSSSDED 183 MG S + KS +VV GALAFGWL IE+A KPFL+KAR A+DKSDPTRDPDD DED Sbjct: 1 MGKSTEAGPLKSVMVVFGALAFGWLAIELAFKPFLDKARSALDKSDPTRDPDD----DED 56 >ref|XP_002520763.1| conserved hypothetical protein [Ricinus communis] gi|223540148|gb|EEF41725.1| conserved hypothetical protein [Ricinus communis] Length = 69 Score = 74.7 bits (182), Expect = 7e-12 Identities = 35/48 (72%), Positives = 39/48 (81%) Frame = +1 Query: 34 KSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDPTRDPDDKSSSD 177 K A+VV+GALAFGWL IE+A KPFL+KAR AMDKSDP RDPDD D Sbjct: 7 KQAMVVVGALAFGWLAIEMAFKPFLDKARAAMDKSDPERDPDDSPPKD 54 >ref|XP_002306767.1| predicted protein [Populus trichocarpa] gi|222856216|gb|EEE93763.1| predicted protein [Populus trichocarpa] Length = 77 Score = 72.8 bits (177), Expect = 3e-11 Identities = 36/49 (73%), Positives = 39/49 (79%), Gaps = 1/49 (2%) Frame = +1 Query: 34 KSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDPTRDPD-DKSSSD 177 K A VV GALAFGWL IE+A KPFL+KAR AMDKSDP RDPD D S+D Sbjct: 7 KQAAVVFGALAFGWLAIEMAFKPFLDKARSAMDKSDPARDPDGDDDSAD 55 >gb|AFK44119.1| unknown [Medicago truncatula] Length = 71 Score = 70.5 bits (171), Expect = 1e-10 Identities = 37/63 (58%), Positives = 44/63 (69%), Gaps = 7/63 (11%) Frame = +1 Query: 34 KSAVVVLGALAFGWLTIEIACKPFLEKARDAMDKSDPTRDPDDKSSS-------DEDFQD 192 K AVVV GALAF WL IE+A KPFL + RD++DKSDPTRDPDD +S + D D Sbjct: 5 KEAVVVAGALAFVWLAIELAFKPFLSQTRDSIDKSDPTRDPDDVPASAAAAVAPETDAGD 64 Query: 193 STA 201 +TA Sbjct: 65 ATA 67