BLASTX nr result

ID: Coptis21_contig00002094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002094
         (2128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282312.1| PREDICTED: rop guanine nucleotide exchange f...   870   0.0  
ref|XP_002306208.1| predicted protein [Populus trichocarpa] gi|2...   813   0.0  
ref|XP_002312931.1| predicted protein [Populus trichocarpa] gi|2...   813   0.0  
ref|XP_002528427.1| Rop guanine nucleotide exchange factor, puta...   806   0.0  
ref|XP_003540459.1| PREDICTED: rop guanine nucleotide exchange f...   787   0.0  

>ref|XP_002282312.1| PREDICTED: rop guanine nucleotide exchange factor 1 [Vitis vinifera]
            gi|297744497|emb|CBI37759.3| unnamed protein product
            [Vitis vinifera]
          Length = 587

 Score =  870 bits (2249), Expect = 0.0
 Identities = 432/554 (77%), Positives = 482/554 (87%), Gaps = 17/554 (3%)
 Frame = +3

Query: 276  CRRYNNDHEGACSSSLTSSPLVATATTGTSSFPV-QPFMLPVIGGKDVVIWEEKTDKLDS 452
            CRRY  D EGA SSS+TSSPL      G SSFPV  P MLPVIGG+DVV+W EK +K ++
Sbjct: 37   CRRY--DGEGA-SSSMTSSPLACRPVVGNSSFPVGPPLMLPVIGGRDVVVWGEKPEKRET 93

Query: 453  DLSELEMMKERFAKLLLGEDMSGGGKGVCTALAVSNAITNLSATVFGELWRLEPLAIQKK 632
            DLSE EMMKERFAKLLLGEDMSGGGKGVCTALA+SNAITNLSATVFGELWRLEPLA QKK
Sbjct: 94   DLSEAEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKK 153

Query: 633  SMWCREMEWLLCVSDSIVELIPSVQEFPGGGTFEVMVPRPRSDLYMNLPALKKLDAMLLS 812
            +MWCREMEWLLCVSDSIVEL+PS+Q+FPGGGT+EVM  RPRSDLYMNLPALKKLDAMLLS
Sbjct: 154  AMWCREMEWLLCVSDSIVELVPSIQQFPGGGTYEVMATRPRSDLYMNLPALKKLDAMLLS 213

Query: 813  MLDGFRDTEFWYVDRGIVMGDGEDGDVYPSPSSNGRPSVRQEEKWWLPCPRVPPNGLSED 992
            MLDGF +TEFWYVDRGI++ + ++ D YP  +S+GRPS+RQEEKWWLPCP+VPPNGLSED
Sbjct: 214  MLDGFCETEFWYVDRGIIVAEADNHDAYPLSASSGRPSIRQEEKWWLPCPKVPPNGLSED 273

Query: 993  ARKRLQQCRDCTNQILKAAMAINSNVLAEMEIPSAFLETLPKTGKACLGDIIYRYVTAEK 1172
            ARKRLQQCRDCTNQILKAAMAINS+VLAEMEIP+A+LETLPK GKACLGDIIYRY+TAE+
Sbjct: 274  ARKRLQQCRDCTNQILKAAMAINSSVLAEMEIPTAYLETLPKNGKACLGDIIYRYITAEQ 333

Query: 1173 FSPECLLDCLDLSSEHHTLEIANRIEAAVHVWKRKDQKKRSNHTKTMRSSWGGKVKGLVG 1352
            FSPECLLDCLDLSSEHHTLEIANRIEAAVHVWK+KD KK+  H K  RS+WGGKVKGLV 
Sbjct: 334  FSPECLLDCLDLSSEHHTLEIANRIEAAVHVWKQKDWKKQPKHLKAKRSTWGGKVKGLVA 393

Query: 1353 DVEKSQFLADRTETLLHSLRLRFPGLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFN 1532
            D EK+QFLA R ETLLHSLRLRFPGLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFN
Sbjct: 394  DTEKNQFLAIRAETLLHSLRLRFPGLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFN 453

Query: 1533 IMARIDDLLYVDDAIRQCVAAESMSMFGR---GGFPIQKKISPSPFSIRHTPYASPFATP 1703
            IMARIDD+LYVDDA+++C AAESM++FGR   GG PIQK++SPSPFSI+H+P+ASPFATP
Sbjct: 454  IMARIDDVLYVDDAVKRCAAAESMALFGRGGLGGLPIQKRMSPSPFSIQHSPFASPFATP 513

Query: 1704 TFCSSTPVGGSPRRTHPSQKKTSHLGMQDGK-------------KLISAEVERVWSYAGN 1844
            TFCSSTP+ GSP RT PS+ K S  G  + K             K I A+ E++WSY GN
Sbjct: 514  TFCSSTPLTGSPGRTPPSRNKMSSKGAPELKLEKPIPAPEMKLEKPIPADFEKMWSYTGN 573

Query: 1845 LSARRDNGDAPERD 1886
            LSAR+ +GDAPERD
Sbjct: 574  LSARKVSGDAPERD 587


>ref|XP_002306208.1| predicted protein [Populus trichocarpa] gi|222849172|gb|EEE86719.1|
            predicted protein [Populus trichocarpa]
          Length = 576

 Score =  813 bits (2101), Expect = 0.0
 Identities = 404/543 (74%), Positives = 461/543 (84%), Gaps = 6/543 (1%)
 Frame = +3

Query: 276  CRRYNNDHEGACSSSLTSSPLVATATTGTSSFPVQPFMLPVIGGKDVVIWEEKTDKL-DS 452
            CRR      GA SSS+TSSP       G   FP  P M+PVIGGKDVV+W+ K +K  D+
Sbjct: 39   CRRGFGRDGGAVSSSMTSSP---RPLPGGFCFPA-PVMVPVIGGKDVVVWDSKNEKRGDA 94

Query: 453  DLSELEMMKERFAKLLLGEDMSGGGKGVCTALAVSNAITNLSATVFGELWRLEPLAIQKK 632
            DLSE+EMMKERFAKLLLGEDMSGGGKGVCTALA+SNAITNLSATVFGELWRLEPLA+QKK
Sbjct: 95   DLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLALQKK 154

Query: 633  SMWCREMEWLLCVSDSIVELIPSVQEFPGGGTFEVMVPRPRSDLYMNLPALKKLDAMLLS 812
            SMW REMEWLLCVSDSIVEL+PS+Q+FPGGGT+EVM  RPRSDLY+NLPALKKLDAML++
Sbjct: 155  SMWKREMEWLLCVSDSIVELVPSIQQFPGGGTYEVMATRPRSDLYVNLPALKKLDAMLIT 214

Query: 813  MLDGFRDTEFWYVDRGIVMGDGEDGDVYPSPSSNGRPSVRQEEKWWLPCPRVPPNGLSED 992
            MLDGF +TEFWY DRGIV+GDG D D YPS  S GRPS+RQE+KWWLPCP+VPP+GLSED
Sbjct: 215  MLDGFSETEFWYADRGIVVGDGGDCDTYPSGISGGRPSIRQEDKWWLPCPKVPPDGLSED 274

Query: 993  ARKRLQQCRDCTNQILKAAMAINSNVLAEMEIPSAFLETLPKTGKACLGDIIYRYVTAEK 1172
            ARKRLQQCRDCTNQILKAAMAINS+VL EMEIP+A++ETLPK GKACLGDIIYRY+TAEK
Sbjct: 275  ARKRLQQCRDCTNQILKAAMAINSSVLVEMEIPTAYMETLPKNGKACLGDIIYRYITAEK 334

Query: 1173 FSPECLLDCLDLSSEHHTLEIANRIEAAVHVWKRKDQKKRSNHTKTMRSSWGGKVKGLVG 1352
            FSPECLLDCLDLS+EHHTLEIANR+EAAVH+WK+KD +K  ++     SSWGGKVKG V 
Sbjct: 335  FSPECLLDCLDLSTEHHTLEIANRVEAAVHIWKQKDHRKHIHNKNIKHSSWGGKVKGFVA 394

Query: 1353 DVEKSQFLADRTETLLHSLRLRFPGLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFN 1532
            D  K+Q LA R ETLL SLRLR+PGLPQTALDMNKIQYNKDVGQSILESYSRV ESLAFN
Sbjct: 395  DTHKNQILAQRAETLLQSLRLRYPGLPQTALDMNKIQYNKDVGQSILESYSRVTESLAFN 454

Query: 1533 IMARIDDLLYVDDAIRQCVAAESMSMFGRGGF---PIQKKISPSPFSIRHTPYASPFATP 1703
            IMARIDD+L+VDDA +QC AAES+S+F RGG    PIQK++SPSPFSI+ +P+ASP+ TP
Sbjct: 455  IMARIDDVLFVDDATKQCAAAESISLFNRGGLGGHPIQKRMSPSPFSIKQSPFASPYGTP 514

Query: 1704 TFCSSTPVGGSPRRTHPSQKKTSHLGMQDGK--KLISAEVERVWSYAGNLSARRDNGDAP 1877
            T+ +STPV GSP R  P QK+ +     D K  K +S + ERVWSYAG++S+RR +GDAP
Sbjct: 515  TYFASTPVSGSPARV-PPQKRGNPKEASDQKFEKPLSPDFERVWSYAGSISSRRVSGDAP 573

Query: 1878 ERD 1886
            ERD
Sbjct: 574  ERD 576


>ref|XP_002312931.1| predicted protein [Populus trichocarpa] gi|222849339|gb|EEE86886.1|
            predicted protein [Populus trichocarpa]
          Length = 577

 Score =  813 bits (2099), Expect = 0.0
 Identities = 407/543 (74%), Positives = 458/543 (84%), Gaps = 6/543 (1%)
 Frame = +3

Query: 276  CRRYNNDHEGACSSSLTSSPLVATATTGTSSFPVQPFMLPVIGGKDVVIWEEKTDKL-DS 452
            CRR      G  SSS+TSSP       G   FP  P M+PVIGGKDVV+W  K +K  ++
Sbjct: 39   CRRGLGRDGGCASSSMTSSP---RPVAGGFCFPA-PVMVPVIGGKDVVVWGSKNEKRRET 94

Query: 453  DLSELEMMKERFAKLLLGEDMSGGGKGVCTALAVSNAITNLSATVFGELWRLEPLAIQKK 632
            DLSE+EMMKERFAKLLLGEDMSGGGKGVCTALA+SNAITNLSATVFGELWRLEPL  QKK
Sbjct: 95   DLSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLLPQKK 154

Query: 633  SMWCREMEWLLCVSDSIVELIPSVQEFPGGGTFEVMVPRPRSDLYMNLPALKKLDAMLLS 812
            SMW REMEWLLCVSDSIVEL+PS+Q+FPGGGT+EVM  RPRSDLY+NLPALKKLDAML+S
Sbjct: 155  SMWKREMEWLLCVSDSIVELVPSMQQFPGGGTYEVMATRPRSDLYVNLPALKKLDAMLIS 214

Query: 813  MLDGFRDTEFWYVDRGIVMGDGEDGDVYPSPSSNGRPSVRQEEKWWLPCPRVPPNGLSED 992
            MLDGF +TEFWYVDRGIV+ DG D D YPS  S GRPS+RQEEKWWLPCP+VPPNGLS+D
Sbjct: 215  MLDGFCETEFWYVDRGIVVADGGDCDAYPSGISGGRPSIRQEEKWWLPCPKVPPNGLSDD 274

Query: 993  ARKRLQQCRDCTNQILKAAMAINSNVLAEMEIPSAFLETLPKTGKACLGDIIYRYVTAEK 1172
            ARKRLQQCRDCTNQILKAAMAINS+VL EMEIP+A++ETLPK GKACLGDIIYRY+TAE+
Sbjct: 275  ARKRLQQCRDCTNQILKAAMAINSSVLVEMEIPTAYMETLPKNGKACLGDIIYRYITAEQ 334

Query: 1173 FSPECLLDCLDLSSEHHTLEIANRIEAAVHVWKRKDQKKRSNHTKTMRSSWGGKVKGLVG 1352
            FSP+ LLDCLDLS+EHHTLEIANRIEAAVHVWK+KD KK +++ +   SSWGGKVKG V 
Sbjct: 335  FSPDRLLDCLDLSTEHHTLEIANRIEAAVHVWKQKDHKKHTHNMRIKHSSWGGKVKGFVT 394

Query: 1353 DVEKSQFLADRTETLLHSLRLRFPGLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFN 1532
            D  K+Q LA R ETLL SLRLRFPGLPQT LDMNKIQYNKDVGQSILESYSRVMESLAFN
Sbjct: 395  DSHKNQILAQRAETLLQSLRLRFPGLPQTTLDMNKIQYNKDVGQSILESYSRVMESLAFN 454

Query: 1533 IMARIDDLLYVDDAIRQCVAAESMSMFGR---GGFPIQKKISPSPFSIRHTPYASPFATP 1703
            IMARIDD++YVDDAI+QC AAESMS+F R   GG PIQK++SPSPFSI+ +P+ASPFATP
Sbjct: 455  IMARIDDVIYVDDAIKQCAAAESMSLFNRGGLGGLPIQKRMSPSPFSIQQSPFASPFATP 514

Query: 1704 TFCSSTPVGGSPRRTHPSQKKTSHLGMQDGK--KLISAEVERVWSYAGNLSARRDNGDAP 1877
            T+C+STPV GSP R   S K+       D K  K +S++ E VW+Y GNLS+RR +GDAP
Sbjct: 515  TYCASTPVSGSPERVPSSLKRGKPKEAPDRKLEKPLSSDFETVWTYTGNLSSRRVSGDAP 574

Query: 1878 ERD 1886
            ERD
Sbjct: 575  ERD 577


>ref|XP_002528427.1| Rop guanine nucleotide exchange factor, putative [Ricinus communis]
            gi|223532163|gb|EEF33969.1| Rop guanine nucleotide
            exchange factor, putative [Ricinus communis]
          Length = 580

 Score =  806 bits (2081), Expect = 0.0
 Identities = 404/543 (74%), Positives = 460/543 (84%), Gaps = 6/543 (1%)
 Frame = +3

Query: 276  CRRYNNDHEGACSSSLTSSPLVATATTGTSSFPVQPFMLPVIGGKDVVIWEEKTDKLDSD 455
            CRR   D EGA +S  +S PL ++A           F  P++  KD+++W+ K +K D+D
Sbjct: 47   CRR-GFDGEGASTSITSSPPLPSSAKFC--------FQTPLLLPKDLLLWDIKPEKRDTD 97

Query: 456  LSELEMMKERFAKLLLGEDMSGGGKGVCTALAVSNAITNLSATVFGELWRLEPLAIQKKS 635
            LSE+EMMKERFAKLLLGEDMSGGGKGVCTALA+SNAITNLSATVFGELWRLEPLA QKKS
Sbjct: 98   LSEVEMMKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKS 157

Query: 636  MWCREMEWLLCVSDSIVELIPSVQEFPGGGTFEVMVPRPRSDLYMNLPALKKLDAMLLSM 815
            MW REMEWLLCVSDSIVEL+PSVQ+FPGGGT+E+M  +PRSDLY+NLPALKKLDAML+SM
Sbjct: 158  MWRREMEWLLCVSDSIVELVPSVQQFPGGGTYEIMAAQPRSDLYVNLPALKKLDAMLISM 217

Query: 816  LDGFRDTEFWYVDRGIVMGDGEDGDVYPSPSSNGRPSVRQEEKWWLPCPRVPPNGLSEDA 995
            LDGF +TEFWYVDRGI++ DG D DVYPS  S GRPS+RQEEKWWLPCP++P NGLSEDA
Sbjct: 218  LDGFCETEFWYVDRGIILADGADNDVYPSGFSTGRPSIRQEEKWWLPCPKLPSNGLSEDA 277

Query: 996  RKRLQQCRDCTNQILKAAMAINSNVLAEMEIPSAFLETLPKTGKACLGDIIYRYVTAEKF 1175
            RKRLQQCRDCTNQILKAAMAINS+VLAEMEIP+A+LETLPK GKACLGDIIYRY+TAE+F
Sbjct: 278  RKRLQQCRDCTNQILKAAMAINSSVLAEMEIPTAYLETLPKCGKACLGDIIYRYITAEQF 337

Query: 1176 SPECLLDCLDLSSEHHTLEIANRIEAAVHVWKRKDQKKRSNHTKTMRSSWGGKVKGLVGD 1355
            SPECLLDCLDLS+EHHTLEIANRIEAA+HVWK+KDQ+K ++HTK   +SWGGKVKGLV D
Sbjct: 338  SPECLLDCLDLSTEHHTLEIANRIEAALHVWKQKDQRKHTSHTKARHTSWGGKVKGLVAD 397

Query: 1356 VE-KSQFLADRTETLLHSLRLRFPGLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFN 1532
             + K+ FLA R ETLL SLRLRFPGLPQTALDM+KIQYNKDVGQSILESYSRVMESLAFN
Sbjct: 398  TKRKNTFLAQRAETLLQSLRLRFPGLPQTALDMHKIQYNKDVGQSILESYSRVMESLAFN 457

Query: 1533 IMARIDDLLYVDDAIRQCVAAESMSMFGR---GGFPIQKKISPSPFSIRHTPYASPFATP 1703
            IMARIDD++YVDDA  +C AAESMS+F R   GG PIQK++SPSPFSI+ +P+ SPFATP
Sbjct: 458  IMARIDDVIYVDDATNRCAAAESMSLFNRSGLGGHPIQKRMSPSPFSIQQSPFTSPFATP 517

Query: 1704 TFCSSTPVGGSPRRTHPSQKKTSHLGMQDGK--KLISAEVERVWSYAGNLSARRDNGDAP 1877
            TFCSSTPV GSP R   S K  +     D K  K   A+ E+VWSY GNLS+RR +GDAP
Sbjct: 518  TFCSSTPVAGSPGRAPSSIKMNNIKEATDQKFEKPCPADFEKVWSYTGNLSSRRVSGDAP 577

Query: 1878 ERD 1886
            ERD
Sbjct: 578  ERD 580


>ref|XP_003540459.1| PREDICTED: rop guanine nucleotide exchange factor 1-like isoform 1
            [Glycine max]
          Length = 562

 Score =  787 bits (2032), Expect = 0.0
 Identities = 401/540 (74%), Positives = 454/540 (84%), Gaps = 9/540 (1%)
 Frame = +3

Query: 294  DHEGACSSSLTSSPLVATATTGTSSFPVQPFMLPVIGGKDVVIWEEKTDKLDSDLSELEM 473
            D EGA SS+  S   VA       +FP    MLPVIGGKDVV+W+ K D    DLSE+EM
Sbjct: 37   DAEGASSSANLSPRPVAAHF----NFPPAQVMLPVIGGKDVVVWDHKRDL---DLSEVEM 89

Query: 474  MKERFAKLLLGEDMSGGGKGVCTALAVSNAITNLSATVFGELWRLEPLAIQKKSMWCREM 653
            MKERFAKLLLGEDMSGGGKGVCTALA+SNAITNLSATVFGELWRLEPLA QKK+MW REM
Sbjct: 90   MKERFAKLLLGEDMSGGGKGVCTALAISNAITNLSATVFGELWRLEPLAPQKKTMWRREM 149

Query: 654  EWLLCVSDSIVELIPSVQEFPGGGTFEVMVPRPRSDLYMNLPALKKLDAMLLSMLDGFRD 833
            EWLLCVSDSIVEL+PSVQ+FPGGGT+EVM  RPRSDLY+NLPALKKLD MLL+MLDGF D
Sbjct: 150  EWLLCVSDSIVELVPSVQQFPGGGTYEVMATRPRSDLYINLPALKKLDGMLLNMLDGFHD 209

Query: 834  TEFWYVDRGIVMGDGEDGDVYPSPSSNGRPSVRQEEKWWLPCPRVPPNGLSEDARKRLQQ 1013
            T+FWYVDRGI++GD +D D Y      GRPSVRQEEKWWLP P++PPNGLSE++RKRLQQ
Sbjct: 210  TQFWYVDRGIILGDSKDCDAY------GRPSVRQEEKWWLPSPKLPPNGLSEESRKRLQQ 263

Query: 1014 CRDCTNQILKAAMAINSNVLAEMEIPSAFLETLPKTGKACLGDIIYRYVTAEKFSPECLL 1193
            CRDCTNQILKAA+AIN++VLAEMEIP A++E+LPK GKACLGDIIYRY+TA++FSPECLL
Sbjct: 264  CRDCTNQILKAAVAINTSVLAEMEIPGAYIESLPKNGKACLGDIIYRYITADQFSPECLL 323

Query: 1194 DCLDLSSEHHTLEIANRIEAAVHVWKRKDQKKRSNHTKTMRSSWGGKVKGLVGDVEKSQ- 1370
            DCLDLS+EHHTL+IANRIEAA+HVW+ KD KK  +  K+ R SWGGKVKGLV D EK++ 
Sbjct: 324  DCLDLSTEHHTLDIANRIEAAIHVWRLKDHKKHLSSAKS-RRSWGGKVKGLVADGEKNKN 382

Query: 1371 -FLADRTETLLHSLRLRFPGLPQTALDMNKIQYNKDVGQSILESYSRVMESLAFNIMARI 1547
             FLA R ETLL SL+ RFPGLPQTALDM KIQYNKDVGQSILESYSRVMESLAFNIMARI
Sbjct: 383  NFLAQRAETLLESLKHRFPGLPQTALDMAKIQYNKDVGQSILESYSRVMESLAFNIMARI 442

Query: 1548 DDLLYVDDAIRQCVAAESMSMFGRGGF---PIQKKISPSPFSIRHTPYASPFATPTFCSS 1718
            DD+LYVDD+I++C AA+S+S+F RGGF   PIQK+ SPSPFSI+HTPYASPFATPTFCSS
Sbjct: 443  DDVLYVDDSIKRCAAADSLSLFSRGGFGGMPIQKRFSPSPFSIQHTPYASPFATPTFCSS 502

Query: 1719 TPVGG---SPRRTHPSQKKTSHLGMQD-GKKLISAEVERVWSYAGNLSARRDNGDAPERD 1886
            TPV G   SP R H  ++     G     +KL ++E ERVWSYAGNLSARR +GDAPERD
Sbjct: 503  TPVTGSPCSPARIHDVKRNAPKEGADSKTEKLATSEFERVWSYAGNLSARRASGDAPERD 562


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