BLASTX nr result

ID: Coptis21_contig00002091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002091
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635000.1| PREDICTED: uncharacterized protein LOC100256...   115   1e-23
ref|NP_563886.1| uncharacterized protein [Arabidopsis thaliana] ...   110   5e-22
ref|XP_002316654.1| predicted protein [Populus trichocarpa] gi|2...   104   3e-20
ref|XP_002524675.1| conserved hypothetical protein [Ricinus comm...   103   6e-20
ref|XP_002892627.1| hypothetical protein ARALYDRAFT_471258 [Arab...   103   7e-20

>ref|XP_003635000.1| PREDICTED: uncharacterized protein LOC100256799 [Vitis vinifera]
          Length = 202

 Score =  115 bits (289), Expect = 1e-23
 Identities = 71/173 (41%), Positives = 97/173 (56%), Gaps = 5/173 (2%)
 Frame = +3

Query: 36  PVNSRHIKKRALRNKALAISFNDKDLKDYVGGFHXXXXXXXXEAQQQIAEKDXXXXXXXX 215
           P +++HIKKRALRNKAL++SFN+KDL+D+VGGFH        EAQQ++ E          
Sbjct: 14  PPHAKHIKKRALRNKALSVSFNEKDLRDFVGGFHKRKKKRRKEAQQKLQESQRIKRIVER 73

Query: 216 XXXXXXXXYVQGSGVGGPSGEAEANAGDLDQ--DEETYPKAPVTATKMYDAGNLTVMVTT 389
                    VQ  G    +G       D  +  D    P A V+ T MYD G+  V+VTT
Sbjct: 74  KKRKLERELVQYGGAPTATGSEPDECDDEHEQHDGVDEPIASVSGTTMYDNGDTKVIVTT 133

Query: 390 SEISREEED--KQKTE-RIPRSSGETEKKQQIPVNKKQQSKTTSKHRSVSRLQ 539
           SEISREEE+   +KT+   P +   ++KK  +PV+KK+  K   +HRS  +LQ
Sbjct: 134 SEISREEENHLTEKTQGAAPPAIVGSKKKHNVPVSKKKAFKRVVRHRSQPKLQ 186


>ref|NP_563886.1| uncharacterized protein [Arabidopsis thaliana]
           gi|17065324|gb|AAL32816.1| Unknown protein [Arabidopsis
           thaliana] gi|20260036|gb|AAM13365.1| unknown protein
           [Arabidopsis thaliana] gi|21536797|gb|AAM61129.1|
           unknown [Arabidopsis thaliana]
           gi|332190582|gb|AEE28703.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 200

 Score =  110 bits (275), Expect = 5e-22
 Identities = 73/172 (42%), Positives = 93/172 (54%), Gaps = 6/172 (3%)
 Frame = +3

Query: 36  PVNSRHIKKRALRNKALAISFNDKDLKDYVGGFHXXXXXXXXEAQQQIAEKDXXXXXXXX 215
           P ++RHI KRA +NK+L +SF++KDLKD+V GFH        EAQ+Q  E          
Sbjct: 16  PTSARHIGKRARKNKSLTVSFDEKDLKDFVTGFHKRKKKRRKEAQKQQEEAFRRKRIEAR 75

Query: 216 XXXXXXXXYVQGSGVGGPSGEAEANAGDLDQDEETYPKAPVTATKMYDAGNLTVMVTTSE 395
                    V G+G     GEAE       +DEE  P A  +AT MYD G L V VTTSE
Sbjct: 76  KNRKLEELMVAGNGEDNEDGEAEDEVD--AEDEEAEPDASTSATTMYDTGELKVTVTTSE 133

Query: 396 ISREEED---KQKTERIPRSSGETEK---KQQIPVNKKQQSKTTSKHRSVSR 533
           ISREEE+   K+KT+     SG T K   KQ +PV K +  K  S+ RS ++
Sbjct: 134 ISREEEEPIRKEKTQ--STESGSTAKASTKQPVPVRKTKPMK-QSRRRSTTK 182


>ref|XP_002316654.1| predicted protein [Populus trichocarpa] gi|222859719|gb|EEE97266.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score =  104 bits (259), Expect = 3e-20
 Identities = 66/179 (36%), Positives = 93/179 (51%), Gaps = 2/179 (1%)
 Frame = +3

Query: 9   EAEAAIGLGPVNSRHIKKRALRNKALAISFNDKDLKDYVGGFHXXXXXXXXEAQQQIAEK 188
           E   AI + P  + HIKKR L+NK +++SFN+KDL+DYV GFH        EA +Q  E 
Sbjct: 6   EDNGAIQIPPTRAGHIKKRVLKNKGVSVSFNEKDLRDYVTGFHKRKKKRRKEAIKQ-QEV 64

Query: 189 DXXXXXXXXXXXXXXXXYVQGSGVGGPSGEAEANAGDLDQDEETYPKAPVTATKMYDAGN 368
                             +  +G   P+ +   N G  + DEE  P A ++ T  YD G+
Sbjct: 65  KLRHKRIAARKQRKLEKELALNGGAPPAADESDNYG--EDDEEIEPIASISGTTKYDNGD 122

Query: 369 LTVMVTTSEISREEED--KQKTERIPRSSGETEKKQQIPVNKKQQSKTTSKHRSVSRLQ 539
           + V VTTSEISRE+ED   +KT+       E +K  ++ V+KK   K   KH+S S+ Q
Sbjct: 123 MQVTVTTSEISREDEDGHSEKTQVTVPRLNEADKSHKLSVSKKNSFKKVLKHKSRSKPQ 181


>ref|XP_002524675.1| conserved hypothetical protein [Ricinus communis]
           gi|223536036|gb|EEF37694.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 196

 Score =  103 bits (257), Expect = 6e-20
 Identities = 72/179 (40%), Positives = 95/179 (53%), Gaps = 3/179 (1%)
 Frame = +3

Query: 3   VEEAEAAIGLGPVNSRHIKKRALRNKALAISFNDKDLKDYVGGFHXXXXXXXXEAQQQIA 182
           +EE EA   L    + HIKKR L+NKALA+SFN+KDL+D+V GFH        EAQ+Q  
Sbjct: 5   IEEGEAQ--LPATRTPHIKKRVLKNKALAVSFNEKDLRDFVTGFHKRKKKRRKEAQKQQE 62

Query: 183 EKDXXXXXXXXXXXXXXXXYVQGSGVGGPSGEAEANAGDLDQDEETYPKAPVTATKMYDA 362
           E                   V   G   PS E++ + GD DQD ET   A V  T  Y  
Sbjct: 63  EVLRRKRIEERKKRKLERQLVLYGGAPPPSDESDEDHGD-DQDIETI--ASVNGTVEYVN 119

Query: 363 GNLTVMVTTSEISREEEDKQ---KTERIPRSSGETEKKQQIPVNKKQQSKTTSKHRSVS 530
            ++ V VTTSEISRE+ED Q     + +P +    EK+  + V+KK+  K  SKH++ S
Sbjct: 120 EDVKVTVTTSEISREDEDGQGGVMQKAVPPTVTGVEKRHNLAVSKKKPFKKVSKHKARS 178


>ref|XP_002892627.1| hypothetical protein ARALYDRAFT_471258 [Arabidopsis lyrata subsp.
           lyrata] gi|297338469|gb|EFH68886.1| hypothetical protein
           ARALYDRAFT_471258 [Arabidopsis lyrata subsp. lyrata]
          Length = 200

 Score =  103 bits (256), Expect = 7e-20
 Identities = 71/185 (38%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
 Frame = +3

Query: 3   VEEAEAAIGLGPVNSRHIKKRALRNKALAISFNDKDLKDYVGGFHXXXXXXXXEAQQQIA 182
           ++  EA     P ++RHI KRA +NK+L +SF++KDLKD+V GFH        EAQ+Q  
Sbjct: 5   LDNDEAGSLAPPTSARHIGKRARKNKSLTVSFDEKDLKDFVTGFHKRKKKRRKEAQKQQE 64

Query: 183 EKDXXXXXXXXXXXXXXXXYVQGSGVGGPSGEAEANAGDLDQDEETYPKAPVTATKMYDA 362
           E                   V G G     GEAE    +  +DEE  P A  + T MYD 
Sbjct: 65  EALRRKRIEARKNRKLEELMVAGHGEDNEDGEAEDE--EDAEDEEAEPDASTSGTTMYDT 122

Query: 363 GNLTVMVTTSEISREEED---KQKTERIPRSSGETEK---KQQIPVNKKQQSKTTSKHRS 524
           G L V VTTS IS EEE+   K KT+     SG T K   KQ +PV K +  K + K  S
Sbjct: 123 GELKVTVTTSAISCEEEEPIRKDKTQ--STESGSTAKASTKQPVPVRKTKPMKQSRKRSS 180

Query: 525 VSRLQ 539
              ++
Sbjct: 181 TKTMK 185


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