BLASTX nr result

ID: Coptis21_contig00002087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002087
         (1191 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526540.1| PREDICTED: GEM-like protein 1-like [Glycine ...   332   1e-88
gb|ACU23491.1| unknown [Glycine max]                                  332   1e-88
gb|ABS52645.1| GEM-like 1 [Vitis vinifera]                            326   6e-87
ref|XP_002285708.1| PREDICTED: GEM-like 1 [Vitis vinifera]            324   3e-86
ref|XP_003602953.1| GLABRA2 expression modulator [Medicago trunc...   322   2e-85

>ref|XP_003526540.1| PREDICTED: GEM-like protein 1-like [Glycine max]
          Length = 269

 Score =  332 bits (850), Expect = 1e-88
 Identities = 168/272 (61%), Positives = 193/272 (70%), Gaps = 8/272 (2%)
 Frame = -2

Query: 1181 PPNLQSNNKKMDNQQQXXXXXXXXXXXXXXXXPGHSSDYAPYPKLNSEDTTPPIFGSDPN 1002
            PP  Q+ N K +  Q                   HS DYAPYPKL+  D  PP    +  
Sbjct: 6    PPQTQATNTKPEESQSQSQSQPQR----------HSGDYAPYPKLDPTDVAPPQQPLNTE 55

Query: 1001 KPGPVSES--------NNPYITXXXXXXXXAKIAVDSVKDTLGRWGKIVDEATKKAGDLA 846
               P+SE         +NPY+T         K  +DSVKD LG+WGK   EATKKA DLA
Sbjct: 56   SRAPISEDAATTMPKDSNPYVTPAPVTASSTKTTLDSVKDVLGKWGKKAAEATKKAEDLA 115

Query: 845  GNVWQHLKTAPSVTDAAMGRIAQSTKVLAEGGYDKIFQQTFETVPEEQLLKSYACYLSTS 666
            GN+WQHLKT PS  DAA+GRIAQ TKVLAEGGY+KIF+QTFETVPEEQLLK+YACYLSTS
Sbjct: 116  GNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLLKTYACYLSTS 175

Query: 665  AGPVMGILYLSTAKLAFSSDIPLSYKEGDKTEWSYYKVVIPLHQFKAINTSASKANPAEK 486
            AGPVMG+LYLSTAKLAF SD PLSY+ GD+T+WSYYKVVIPLHQ +A+N S SK N +EK
Sbjct: 176  AGPVMGVLYLSTAKLAFCSDNPLSYQVGDQTQWSYYKVVIPLHQLRAVNASTSKTNQSEK 235

Query: 485  YIQIISVDNHEFWYMGFVNYDSAVNSLQEALQ 390
            YIQIISVDNHEFW+MGFV+YDSAV ++Q ALQ
Sbjct: 236  YIQIISVDNHEFWFMGFVHYDSAVKNIQGALQ 267


>gb|ACU23491.1| unknown [Glycine max]
          Length = 269

 Score =  332 bits (850), Expect = 1e-88
 Identities = 168/272 (61%), Positives = 193/272 (70%), Gaps = 8/272 (2%)
 Frame = -2

Query: 1181 PPNLQSNNKKMDNQQQXXXXXXXXXXXXXXXXPGHSSDYAPYPKLNSEDTTPPIFGSDPN 1002
            PP  Q+ N K +  Q                   HS DYAPYPKL+  D  PP    +  
Sbjct: 6    PPQTQATNTKPEESQSQSQSQPQR----------HSGDYAPYPKLDPTDVAPPQQPLNTE 55

Query: 1001 KPGPVSES--------NNPYITXXXXXXXXAKIAVDSVKDTLGRWGKIVDEATKKAGDLA 846
               P+SE         +NPY+T         K  +DSVKD LG+WGK   EATKKA DLA
Sbjct: 56   SRAPISEDAATTMPKDSNPYVTPAPATASSTKTTLDSVKDVLGKWGKKAAEATKKAEDLA 115

Query: 845  GNVWQHLKTAPSVTDAAMGRIAQSTKVLAEGGYDKIFQQTFETVPEEQLLKSYACYLSTS 666
            GN+WQHLKT PS  DAA+GRIAQ TKVLAEGGY+KIF+QTFETVPEEQLLK+YACYLSTS
Sbjct: 116  GNMWQHLKTGPSFADAAVGRIAQGTKVLAEGGYEKIFRQTFETVPEEQLLKTYACYLSTS 175

Query: 665  AGPVMGILYLSTAKLAFSSDIPLSYKEGDKTEWSYYKVVIPLHQFKAINTSASKANPAEK 486
            AGPVMG+LYLSTAKLAF SD PLSY+ GD+T+WSYYKVVIPLHQ +A+N S SK N +EK
Sbjct: 176  AGPVMGVLYLSTAKLAFCSDNPLSYQVGDQTQWSYYKVVIPLHQLRAVNASTSKTNQSEK 235

Query: 485  YIQIISVDNHEFWYMGFVNYDSAVNSLQEALQ 390
            YIQIISVDNHEFW+MGFV+YDSAV ++Q ALQ
Sbjct: 236  YIQIISVDNHEFWFMGFVHYDSAVKNIQGALQ 267


>gb|ABS52645.1| GEM-like 1 [Vitis vinifera]
          Length = 284

 Score =  326 bits (836), Expect = 6e-87
 Identities = 171/261 (65%), Positives = 188/261 (72%), Gaps = 32/261 (12%)
 Frame = -2

Query: 1076 SSDYAPYPKLNSEDTTPP--------IFGSDP-----NKPGPVSES-------------- 978
            S+DYAPYPKL+  D  PP        I    P     N   P+SES              
Sbjct: 21   SADYAPYPKLDPNDVAPPKEDWTTVTISSQTPHPVSQNSGSPISESASEGPAPIARNSAT 80

Query: 977  -----NNPYITXXXXXXXXAKIAVDSVKDTLGRWGKIVDEATKKAGDLAGNVWQHLKTAP 813
                 +NPYI+         K  +DSVKD LG+WGK   EATKKA DLAGN+WQHLKT P
Sbjct: 81   TMPVESNPYISSSPAPASSMKNKMDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGP 140

Query: 812  SVTDAAMGRIAQSTKVLAEGGYDKIFQQTFETVPEEQLLKSYACYLSTSAGPVMGILYLS 633
            S  DAA+GRIAQ TKVLAEGGY+KIFQQTFETVPEEQL KSYACYLSTSAGPVMGILYLS
Sbjct: 141  SFADAAVGRIAQGTKVLAEGGYEKIFQQTFETVPEEQLQKSYACYLSTSAGPVMGILYLS 200

Query: 632  TAKLAFSSDIPLSYKEGDKTEWSYYKVVIPLHQFKAINTSASKANPAEKYIQIISVDNHE 453
            T KLAF SD PLSYK G++TEWSYYKVVIPLHQ KA+NTS SK NPAEKY+QIISVDNHE
Sbjct: 201  TEKLAFCSDSPLSYKVGEQTEWSYYKVVIPLHQLKAVNTSTSKVNPAEKYVQIISVDNHE 260

Query: 452  FWYMGFVNYDSAVNSLQEALQ 390
            FW+MGFV+YDSAV +LQ ALQ
Sbjct: 261  FWFMGFVHYDSAVKNLQGALQ 281


>ref|XP_002285708.1| PREDICTED: GEM-like 1 [Vitis vinifera]
          Length = 284

 Score =  324 bits (830), Expect = 3e-86
 Identities = 170/261 (65%), Positives = 187/261 (71%), Gaps = 32/261 (12%)
 Frame = -2

Query: 1076 SSDYAPYPKLNSEDTTPP--------IFGSDP-----NKPGPVSES-------------- 978
            S+DYAPYPKL+  D  PP        I    P     N   P+SES              
Sbjct: 21   SADYAPYPKLDPNDVAPPKEDWTTVTISSQTPHPVSQNSGSPISESASEGPAPIARNSAT 80

Query: 977  -----NNPYITXXXXXXXXAKIAVDSVKDTLGRWGKIVDEATKKAGDLAGNVWQHLKTAP 813
                 +NPYI+         K  +DSVKD LG+WGK   EATKKA DLAGN+WQHLK  P
Sbjct: 81   TMPVESNPYISSSPAPASSMKNKMDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKMGP 140

Query: 812  SVTDAAMGRIAQSTKVLAEGGYDKIFQQTFETVPEEQLLKSYACYLSTSAGPVMGILYLS 633
            S  DAA+GRIAQ TKVLAEGGY+KIFQQTFETVPEEQL KSYACYLSTSAGPVMGILYLS
Sbjct: 141  SFADAAVGRIAQGTKVLAEGGYEKIFQQTFETVPEEQLQKSYACYLSTSAGPVMGILYLS 200

Query: 632  TAKLAFSSDIPLSYKEGDKTEWSYYKVVIPLHQFKAINTSASKANPAEKYIQIISVDNHE 453
            T KLAF SD PLSYK G++TEWSYYKVVIPLHQ KA+NTS SK NPAEKY+QIISVDNHE
Sbjct: 201  TEKLAFCSDSPLSYKVGEQTEWSYYKVVIPLHQLKAVNTSTSKVNPAEKYVQIISVDNHE 260

Query: 452  FWYMGFVNYDSAVNSLQEALQ 390
            FW+MGFV+YDSAV +LQ ALQ
Sbjct: 261  FWFMGFVHYDSAVKNLQGALQ 281


>ref|XP_003602953.1| GLABRA2 expression modulator [Medicago truncatula]
            gi|355492001|gb|AES73204.1| GLABRA2 expression modulator
            [Medicago truncatula]
          Length = 258

 Score =  322 bits (824), Expect = 2e-85
 Identities = 163/246 (66%), Positives = 187/246 (76%), Gaps = 14/246 (5%)
 Frame = -2

Query: 1079 HSSDYAPYPKLNSEDTTPPIFGSDPNKPGPVSESN-------------NPYITXXXXXXX 939
            H+ DYAPYPKL+  D  PP        P PV+  +             NPY++       
Sbjct: 21   HTPDYAPYPKLDPNDVAPP--------PPPVATESRATDAATTMPAESNPYVSPAPVPAP 72

Query: 938  XA-KIAVDSVKDTLGRWGKIVDEATKKAGDLAGNVWQHLKTAPSVTDAAMGRIAQSTKVL 762
             + K  +DSVKD LG+WGK   EATKKA DLAGN+WQHLKT PS  DAA+GRIAQ TKVL
Sbjct: 73   TSAKNTLDSVKDVLGKWGKKAAEATKKAEDLAGNMWQHLKTGPSFADAAVGRIAQGTKVL 132

Query: 761  AEGGYDKIFQQTFETVPEEQLLKSYACYLSTSAGPVMGILYLSTAKLAFSSDIPLSYKEG 582
            AEGGY+KIF+QTFETVPEEQLLK+YACYLSTSAGPVMG+LYLSTAKLAF SD PLSY+ G
Sbjct: 133  AEGGYEKIFRQTFETVPEEQLLKTYACYLSTSAGPVMGVLYLSTAKLAFCSDNPLSYQTG 192

Query: 581  DKTEWSYYKVVIPLHQFKAINTSASKANPAEKYIQIISVDNHEFWYMGFVNYDSAVNSLQ 402
            D+T+WSYYKVVIPLHQ +A+N S SKANP EK+IQIISVDNHEFW+MGFV YDSAV  +Q
Sbjct: 193  DQTQWSYYKVVIPLHQLRAVNPSTSKANPTEKFIQIISVDNHEFWFMGFVYYDSAVKHIQ 252

Query: 401  EALQTR 384
            EALQ+R
Sbjct: 253  EALQSR 258


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