BLASTX nr result

ID: Coptis21_contig00002086 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002086
         (899 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270507.1| PREDICTED: uncharacterized protein LOC100261...   117   4e-24
ref|XP_003550346.1| PREDICTED: uncharacterized protein LOC100818...   104   3e-20
ref|XP_003529560.1| PREDICTED: uncharacterized protein LOC100776...   104   3e-20
ref|XP_002328600.1| predicted protein [Populus trichocarpa] gi|2...   102   2e-19
gb|ABK92928.1| unknown [Populus trichocarpa]                          101   3e-19

>ref|XP_002270507.1| PREDICTED: uncharacterized protein LOC100261891 [Vitis vinifera]
           gi|296083344|emb|CBI22980.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score =  117 bits (293), Expect = 4e-24
 Identities = 64/116 (55%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
 Frame = -1

Query: 707 MVGLSDLLEARKNFNK-SPQVINKITMI-KPHLXXXXXXXXXXXXXXXXXXPAISFLDVC 534
           MVGLS +LEA+K  NK +PQVINKITM+ KP                     A +FLD C
Sbjct: 1   MVGLSIVLEAQKGINKKTPQVINKITMMTKP--TPFPSPPARWNSHSPLLPAATTFLDEC 58

Query: 533 FLCKQRLFPGNDIFMYNGDRAFCSTECRYRQILMDEEENVKREKCCFVATRPNSSS 366
           FLCKQ+L PG DI+MY GDRAFCS ECR RQI MDEEE V+R+ C   A +P S+S
Sbjct: 59  FLCKQKLLPGKDIYMYKGDRAFCSVECRCRQIFMDEEETVRRDNCSLAAMKPTSAS 114


>ref|XP_003550346.1| PREDICTED: uncharacterized protein LOC100818870 [Glycine max]
          Length = 133

 Score =  104 bits (259), Expect = 3e-20
 Identities = 57/116 (49%), Positives = 70/116 (60%), Gaps = 2/116 (1%)
 Frame = -1

Query: 707 MVGLSDLLEARKNF--NKSPQVINKITMIKPHLXXXXXXXXXXXXXXXXXXPAISFLDVC 534
           MVGLS +LEA+K+    K+PQVINK TM+                         +FLD C
Sbjct: 1   MVGLSVVLEAQKSCINKKTPQVINKTTMLM-----LSSIHNKPSPQPSSLFQPPTFLDQC 55

Query: 533 FLCKQRLFPGNDIFMYNGDRAFCSTECRYRQILMDEEENVKREKCCFVATRPNSSS 366
           FLC +RL PG DI+MY GDRAFCS +CR +QI  DEEE +++EKC   A RP SSS
Sbjct: 56  FLCGKRLLPGKDIYMYKGDRAFCSVDCRCKQIFSDEEEAIQKEKCSLAAMRPTSSS 111


>ref|XP_003529560.1| PREDICTED: uncharacterized protein LOC100776779 [Glycine max]
          Length = 135

 Score =  104 bits (259), Expect = 3e-20
 Identities = 57/116 (49%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
 Frame = -1

Query: 707 MVGLSDLLEARKNF--NKSPQVINKITMIKPHLXXXXXXXXXXXXXXXXXXPAISFLDVC 534
           MVGLS +LEA+K+    K+PQVINK +M+   L                     +FLD C
Sbjct: 1   MVGLSVVLEAQKSCINKKTPQVINKTSMM---LSSIHNKPSPPLPQPSSLFQPPTFLDQC 57

Query: 533 FLCKQRLFPGNDIFMYNGDRAFCSTECRYRQILMDEEENVKREKCCFVATRPNSSS 366
           FLC +RL PG DI+MY GDRAFCS +CR +QI  DEEE +++EKC   A RP SSS
Sbjct: 58  FLCGKRLLPGKDIYMYKGDRAFCSVDCRCKQIFTDEEEAIQKEKCSLAAMRPTSSS 113


>ref|XP_002328600.1| predicted protein [Populus trichocarpa] gi|222838582|gb|EEE76947.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  102 bits (253), Expect = 2e-19
 Identities = 57/125 (45%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
 Frame = -1

Query: 707 MVGLSDLLEARKNFN---KSPQVINKITMIKPHLXXXXXXXXXXXXXXXXXXPAI----- 552
           MVGLS +LEA+K+ +   K+PQVINK TM+   +                  P+      
Sbjct: 1   MVGLSIVLEAQKSGSVNSKTPQVINKATMMMMMISNKPSSGPPSFSSATAPLPSYRNCSF 60

Query: 551 ---SFLDVCFLCKQRLFPGNDIFMYNGDRAFCSTECRYRQILMDEEENVKREKCCFVATR 381
              +FL  CFLC Q+L PG DI+MY GDRAFCS ECR RQI MDEEE +++E C F A +
Sbjct: 61  PVPAFLQQCFLCGQKLLPGKDIYMYKGDRAFCSVECRCRQIFMDEEETIRKENCSFSAMK 120

Query: 380 PNSSS 366
           P  S+
Sbjct: 121 PTGSA 125


>gb|ABK92928.1| unknown [Populus trichocarpa]
          Length = 157

 Score =  101 bits (251), Expect = 3e-19
 Identities = 57/125 (45%), Positives = 73/125 (58%), Gaps = 11/125 (8%)
 Frame = -1

Query: 707 MVGLSDLLEARKNFN---KSPQVINKITMIKPHLXXXXXXXXXXXXXXXXXXPAI----- 552
           MVGLS +LEA+K+ +   K+PQVINK TM+   +                  P+      
Sbjct: 1   MVGLSIVLEAQKSGSVNSKTPQVINKATMMMMMISNKPSSGPPSFSSATAPLPSYRNCSF 60

Query: 551 ---SFLDVCFLCKQRLFPGNDIFMYNGDRAFCSTECRYRQILMDEEENVKREKCCFVATR 381
              +FL  CFLC Q+L PG DI+MY GDRAFCS ECR RQI MDEEE +++E C F A +
Sbjct: 61  PVPAFLQQCFLCGQKLLPGKDIYMYKGDRAFCSVECRCRQIFMDEEETMRKENCSFSAMK 120

Query: 380 PNSSS 366
           P  S+
Sbjct: 121 PTGSA 125


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