BLASTX nr result

ID: Coptis21_contig00002085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002085
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308540.1| predicted protein [Populus trichocarpa] gi|2...   224   4e-56
ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257...   221   2e-55
gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indi...   214   4e-53
ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823...   197   3e-48
ref|XP_002516098.1| conserved hypothetical protein [Ricinus comm...   196   7e-48

>ref|XP_002308540.1| predicted protein [Populus trichocarpa] gi|222854516|gb|EEE92063.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  224 bits (570), Expect = 4e-56
 Identities = 120/229 (52%), Positives = 148/229 (64%), Gaps = 45/229 (19%)
 Frame = +1

Query: 7   GTSSDYLQKDILPLRPGAYGLDTFAGLARHTAPGFSGLTSGASLKGFPSPLEDPAL---- 174
           G SSD+LQ+DI PL+ G+YGL+ ++G+     P   G+  GAS KG+ SPLEDP+L    
Sbjct: 46  GASSDFLQRDINPLQLGSYGLNGYSGVGFRPEPVIGGVMPGASGKGYSSPLEDPSLLAQR 105

Query: 175 ------------------------------SSRG---------IPELLNERPSSLRKVDS 237
                                         S RG         IP+++N+RP SLR  D 
Sbjct: 106 GDASMHAIGGAIPGSTGKGYPSPLEDPSLLSQRGDASVRVTAAIPDMINDRPGSLRSADG 165

Query: 238 --VLGEESSILFVDGLPSDCTRRELAHLFRPFIGFKELRLVHKEPRHSRDKAMVLCFVEF 411
             V   ES+ILFVDGLP+DCTRRE+ HLFRPFIG+KE+R+VHKE R S D+A VLCFVEF
Sbjct: 166 PPVPKGESNILFVDGLPTDCTRREVGHLFRPFIGYKEIRVVHKEARKSGDRATVLCFVEF 225

Query: 412 SDTKCALTAMEALQGYKFDEKKPDAPILKIQFAQFPFCPPSSRDDQRLG 558
           +D  CA TAMEALQGYKFD+KKPD+P LKIQFA+FPF PPS RD +R+G
Sbjct: 226 TDANCAATAMEALQGYKFDDKKPDSPTLKIQFARFPFRPPSDRDGKRIG 274


>ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
           vinifera] gi|296081671|emb|CBI20676.3| unnamed protein
           product [Vitis vinifera]
          Length = 239

 Score =  221 bits (564), Expect = 2e-55
 Identities = 117/201 (58%), Positives = 141/201 (70%), Gaps = 12/201 (5%)
 Frame = +1

Query: 1   LRGTSSDYLQKDILPLRPGAYGLDTFAGLARHTAPGFSGLTSGASLKGFPSPLEDPALS- 177
           L G  SDY  KDILP+RPGA+  D   G+     P   G T+  ++KG+P+P+EDP L  
Sbjct: 44  LHGAPSDYPPKDILPVRPGAHDFDDIMGIRVPPKPVIGGFTATTNIKGYPNPVEDPNLIG 103

Query: 178 ---------SRGIPELLNERPSSLRKVDSVLG--EESSILFVDGLPSDCTRRELAHLFRP 324
                    S GIP++  ERPSS   V+S+    +ES+ILFVDGLP DCTRRE+ HLFRP
Sbjct: 104 QRRDVAHGISPGIPDI--ERPSSFGNVESLPPPVQESNILFVDGLPKDCTRREVGHLFRP 161

Query: 325 FIGFKELRLVHKEPRHSRDKAMVLCFVEFSDTKCALTAMEALQGYKFDEKKPDAPILKIQ 504
           FIGFKE+R+VHKEPRHS DKAMVLCFVEF+D  C+ TA+EALQGYKFD+KKPD+P L+IQ
Sbjct: 162 FIGFKEIRVVHKEPRHSGDKAMVLCFVEFNDASCSRTALEALQGYKFDDKKPDSPTLRIQ 221

Query: 505 FAQFPFCPPSSRDDQRLGDPL 567
           FA FPF  PS      LG PL
Sbjct: 222 FAHFPFRLPSD-----LGVPL 237


>gb|EEC80002.1| hypothetical protein OsI_21654 [Oryza sativa Indica Group]
          Length = 232

 Score =  214 bits (544), Expect = 4e-53
 Identities = 113/192 (58%), Positives = 139/192 (72%), Gaps = 8/192 (4%)
 Frame = +1

Query: 1   LRGTSSDYLQKDILPLRPGAYGLDTFAGLARHTAPGFSGLTSGASLKGFPSPLEDPALSS 180
           L GTS D L+ D+ PL+P AYGLD  AG +     G  GL +G + +G PSPLEDPAL  
Sbjct: 40  LHGTS-DILRHDV-PLQPRAYGLDGAAGASHPALAGLGGLAAGTTARG-PSPLEDPALVR 96

Query: 181 RG--------IPELLNERPSSLRKVDSVLGEESSILFVDGLPSDCTRRELAHLFRPFIGF 336
           R         IP++  E P  L  +D    +ES+ILFVDGLP+DCTRRE+AHLFRPF+GF
Sbjct: 97  RSSSLGKTASIPDV--EHPRPLLNLDGPREDESNILFVDGLPTDCTRREVAHLFRPFVGF 154

Query: 337 KELRLVHKEPRHSRDKAMVLCFVEFSDTKCALTAMEALQGYKFDEKKPDAPILKIQFAQF 516
           K++RLVHKEPRHS D+A VLCFVEFSD KCA+TAMEALQ Y+FDE+KPDA +L I+FA+F
Sbjct: 155 KDIRLVHKEPRHSSDRAYVLCFVEFSDAKCAITAMEALQEYRFDERKPDAAVLNIKFARF 214

Query: 517 PFCPPSSRDDQR 552
           PF P ++  D R
Sbjct: 215 PFRPAAAPHDDR 226


>ref|XP_003557195.1| PREDICTED: uncharacterized protein LOC100823400 [Brachypodium
           distachyon]
          Length = 209

 Score =  197 bits (502), Expect = 3e-48
 Identities = 110/206 (53%), Positives = 139/206 (67%), Gaps = 21/206 (10%)
 Frame = +1

Query: 1   LRGTSSDYLQKDILPLRPGAYGLDTFAGLARHTAPGFSGLTSGAS-LKGFP--------- 150
           LRG SS  + +  +P++  AYGLD   G++     G   L +GA  L+  P         
Sbjct: 4   LRGVSS--IPRSDVPVQSRAYGLDGPTGVSHPALAGLGALPAGARPLETSPLEPPAVARP 61

Query: 151 ---SPLEDPALSSRG--------IPELLNERPSSLRKVDSVLGEESSILFVDGLPSDCTR 297
              SPLED AL  R         IP++  ERP+ +  +D    +ES+ILFVDGLP+DC R
Sbjct: 62  RGASPLEDQALVRRSSSLGRTATIPDI--ERPNPVLNIDRPSEDESNILFVDGLPTDCKR 119

Query: 298 RELAHLFRPFIGFKELRLVHKEPRHSRDKAMVLCFVEFSDTKCALTAMEALQGYKFDEKK 477
           RE+AHLFRPF+GFK+LRLVHKEPR S DKA VLCFVEF+D KCA TAM+ALQ Y+FDE+K
Sbjct: 120 REVAHLFRPFVGFKDLRLVHKEPRRSGDKAYVLCFVEFNDAKCAFTAMQALQEYRFDERK 179

Query: 478 PDAPILKIQFAQFPFCPPSSRDDQRL 555
           PDAP+LKIQFA+FPF  P++ DD+RL
Sbjct: 180 PDAPVLKIQFARFPFRLPAAHDDRRL 205


>ref|XP_002516098.1| conserved hypothetical protein [Ricinus communis]
           gi|223544584|gb|EEF46100.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 243

 Score =  196 bits (499), Expect = 7e-48
 Identities = 99/204 (48%), Positives = 143/204 (70%), Gaps = 17/204 (8%)
 Frame = +1

Query: 4   RGTSSDYLQKDILPLR-PGAYGLDTFAGLARHTAPGFSGLTSGASLKGFPSPLEDPALSS 180
           R ++SD+L+++I PLR P +YGL+          P  SG+  GAS +G+ SPL DP+L S
Sbjct: 42  RDSASDFLRREITPLRQPVSYGLNNSNN---DDIPVRSGVIPGASSRGYLSPLNDPSLPS 98

Query: 181 R------------GIPELLNERPSSLRKVD----SVLGEESSILFVDGLPSDCTRRELAH 312
                         IP+++N++P +  +++    SV   ES+ILFVDGLP+DCTRRE+ H
Sbjct: 99  HRLRDTSVNVTTLAIPDVINDQPPNYLRINADSPSVSRTESNILFVDGLPTDCTRREVGH 158

Query: 313 LFRPFIGFKELRLVHKEPRHSRDKAMVLCFVEFSDTKCALTAMEALQGYKFDEKKPDAPI 492
           LFRPFIG+K+++++H+EPR   DKAMV CFVEF+D KCA+TAMEALQGYKFD+++ ++P+
Sbjct: 159 LFRPFIGYKDIKVIHREPRRDGDKAMVYCFVEFADAKCAITAMEALQGYKFDDRRSNSPV 218

Query: 493 LKIQFAQFPFCPPSSRDDQRLGDP 564
           L+I  A+FPF PP  R++Q +  P
Sbjct: 219 LRIHLARFPFRPPHDRNEQPVAIP 242


Top