BLASTX nr result

ID: Coptis21_contig00002069 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002069
         (1070 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39086.3| unnamed protein product [Vitis vinifera]              608   e-172
ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   608   e-172
ref|XP_002310965.1| predicted protein [Populus trichocarpa] gi|2...   608   e-172
ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   607   e-171
ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putat...   606   e-171

>emb|CBI39086.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score =  608 bits (1568), Expect = e-172
 Identities = 290/342 (84%), Positives = 316/342 (92%)
 Frame = -1

Query: 1070 GATSYINSLFQTLYHIPYFRKAIYHMPTTVSDMQSRSIILALQSLFYKLQYSDNSVATKE 891
            GAT Y+NSL QTLYHIPYFRKA+YHMPTT +DM S SI LALQSLFYKLQY+DNSVATKE
Sbjct: 204  GATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYNDNSVATKE 263

Query: 890  LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTIVEGTIQQLFEGHHMSCIQCMNVD 711
            LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT+VEGTIQQLFEGHHM+ I+C+NVD
Sbjct: 264  LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVD 323

Query: 710  HSSMRKESFYDLQLDVKGCLDVYASLDKYVGVEHLEGDNKYRAGQHGLQDARKGVLFLDF 531
            + S RKESFYDLQLDVKGC DVYAS DKYV VE LEGDN+Y+A  HGLQDA+KGVLF+DF
Sbjct: 324  YKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNRYQAENHGLQDAKKGVLFIDF 383

Query: 530  PPVLQLQLKRFEYDFMWDTMVKINDRYEFPLELDLDRENGKYLSPNADRRVRNLYVLHSV 351
            PPVLQLQLKRFEYDFM DTMVKINDRYEFPL+LDLDRENGKYLSP+ADR VRNLY LHSV
Sbjct: 384  PPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSV 443

Query: 350  LVHSGGEHGGRYYAFIRPTLSDQWLRFDDARVTKEDMKIAVEEQYGGEEELTQTNPGFNS 171
            LVHSGG HGG YYAFIRPTLSDQW +FDD RVTKED + A+EEQYGGEEEL QTNPGFN+
Sbjct: 444  LVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDTRRALEEQYGGEEELPQTNPGFNN 503

Query: 170  TPFRFTKYSNAYMLVYIRKTDKERIFCNVDEQDISEHLRVRL 45
            TPF+FTKYSNAYMLVYIR++DKE+I CNVDE+DI+EHLR+RL
Sbjct: 504  TPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHLRIRL 545


>ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
            vinifera]
          Length = 1117

 Score =  608 bits (1568), Expect = e-172
 Identities = 290/342 (84%), Positives = 316/342 (92%)
 Frame = -1

Query: 1070 GATSYINSLFQTLYHIPYFRKAIYHMPTTVSDMQSRSIILALQSLFYKLQYSDNSVATKE 891
            GAT Y+NSL QTLYHIPYFRKA+YHMPTT +DM S SI LALQSLFYKLQY+DNSVATKE
Sbjct: 204  GATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYNDNSVATKE 263

Query: 890  LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTIVEGTIQQLFEGHHMSCIQCMNVD 711
            LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT+VEGTIQQLFEGHHM+ I+C+NVD
Sbjct: 264  LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVD 323

Query: 710  HSSMRKESFYDLQLDVKGCLDVYASLDKYVGVEHLEGDNKYRAGQHGLQDARKGVLFLDF 531
            + S RKESFYDLQLDVKGC DVYAS DKYV VE LEGDN+Y+A  HGLQDA+KGVLF+DF
Sbjct: 324  YKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNRYQAENHGLQDAKKGVLFIDF 383

Query: 530  PPVLQLQLKRFEYDFMWDTMVKINDRYEFPLELDLDRENGKYLSPNADRRVRNLYVLHSV 351
            PPVLQLQLKRFEYDFM DTMVKINDRYEFPL+LDLDRENGKYLSP+ADR VRNLY LHSV
Sbjct: 384  PPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSV 443

Query: 350  LVHSGGEHGGRYYAFIRPTLSDQWLRFDDARVTKEDMKIAVEEQYGGEEELTQTNPGFNS 171
            LVHSGG HGG YYAFIRPTLSDQW +FDD RVTKED + A+EEQYGGEEEL QTNPGFN+
Sbjct: 444  LVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDTRRALEEQYGGEEELPQTNPGFNN 503

Query: 170  TPFRFTKYSNAYMLVYIRKTDKERIFCNVDEQDISEHLRVRL 45
            TPF+FTKYSNAYMLVYIR++DKE+I CNVDE+DI+EHLR+RL
Sbjct: 504  TPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHLRIRL 545


>ref|XP_002310965.1| predicted protein [Populus trichocarpa] gi|222850785|gb|EEE88332.1|
            predicted protein [Populus trichocarpa]
          Length = 1131

 Score =  608 bits (1568), Expect = e-172
 Identities = 291/342 (85%), Positives = 315/342 (92%)
 Frame = -1

Query: 1070 GATSYINSLFQTLYHIPYFRKAIYHMPTTVSDMQSRSIILALQSLFYKLQYSDNSVATKE 891
            GAT Y+NSL QTLYHIPYFRKA+YHMPTT +D+ S SI LALQSLFYKLQYSD SVATKE
Sbjct: 203  GATCYMNSLLQTLYHIPYFRKAVYHMPTTENDIPSGSIPLALQSLFYKLQYSDTSVATKE 262

Query: 890  LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTIVEGTIQQLFEGHHMSCIQCMNVD 711
            LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT+VEGTIQQLFEGHHM+ I+C+NVD
Sbjct: 263  LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVD 322

Query: 710  HSSMRKESFYDLQLDVKGCLDVYASLDKYVGVEHLEGDNKYRAGQHGLQDARKGVLFLDF 531
            + S RKESFYDLQLDVKGC DVYAS DKYV VE LEGDNKY A QHGLQDARKGVLF+DF
Sbjct: 323  YKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEQHGLQDARKGVLFIDF 382

Query: 530  PPVLQLQLKRFEYDFMWDTMVKINDRYEFPLELDLDRENGKYLSPNADRRVRNLYVLHSV 351
            PPVLQLQLKRFEYDFM DTMVKINDRYEFPL+LDLDRENGKYLSP ADR VRNLY LHSV
Sbjct: 383  PPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPEADRSVRNLYTLHSV 442

Query: 350  LVHSGGEHGGRYYAFIRPTLSDQWLRFDDARVTKEDMKIAVEEQYGGEEELTQTNPGFNS 171
            LVHSGG HGG YYA+IRPTLSDQW +FDD RVTKED+K A+EEQYGGEEEL QTNPGFN+
Sbjct: 443  LVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDIKRALEEQYGGEEELPQTNPGFNN 502

Query: 170  TPFRFTKYSNAYMLVYIRKTDKERIFCNVDEQDISEHLRVRL 45
            +PF+FTKYSNAYMLVYIR++DKE+I CNVDE+DI+EHLR+RL
Sbjct: 503  SPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHLRIRL 544


>ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
            vinifera] gi|296084432|emb|CBI24991.3| unnamed protein
            product [Vitis vinifera]
          Length = 1115

 Score =  607 bits (1565), Expect = e-171
 Identities = 291/342 (85%), Positives = 315/342 (92%)
 Frame = -1

Query: 1070 GATSYINSLFQTLYHIPYFRKAIYHMPTTVSDMQSRSIILALQSLFYKLQYSDNSVATKE 891
            GAT Y+NSL QTLYHIPYFRKA+YHMPTT +DM S SI LALQSLFYKLQYSD SVATKE
Sbjct: 202  GATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYSDTSVATKE 261

Query: 890  LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTIVEGTIQQLFEGHHMSCIQCMNVD 711
            LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT+VEGTIQQLFEGHHM+ I+C+NVD
Sbjct: 262  LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVD 321

Query: 710  HSSMRKESFYDLQLDVKGCLDVYASLDKYVGVEHLEGDNKYRAGQHGLQDARKGVLFLDF 531
            + S RKESFYDLQLDVKGC DVYAS DKYV VE LEGDNKY A  HGLQDARKGVLF+DF
Sbjct: 322  YKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEIHGLQDARKGVLFIDF 381

Query: 530  PPVLQLQLKRFEYDFMWDTMVKINDRYEFPLELDLDRENGKYLSPNADRRVRNLYVLHSV 351
            PPVLQLQLKRFEYDFM DTMVKINDRYEFPL+LDLDRENGKYLSP+ADR VRNLY LHSV
Sbjct: 382  PPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPDADRSVRNLYTLHSV 441

Query: 350  LVHSGGEHGGRYYAFIRPTLSDQWLRFDDARVTKEDMKIAVEEQYGGEEELTQTNPGFNS 171
            LVHSGG HGG YYA+IRPTLSDQW +FDD RVTKED+K A+EEQYGGEEEL QTNPGFN+
Sbjct: 442  LVHSGGVHGGHYYAYIRPTLSDQWFKFDDERVTKEDIKRALEEQYGGEEELPQTNPGFNN 501

Query: 170  TPFRFTKYSNAYMLVYIRKTDKERIFCNVDEQDISEHLRVRL 45
            +PF+FTKYSNAYMLVYIR++DKE+I CNVDE+DI+EHLR+RL
Sbjct: 502  SPFKFTKYSNAYMLVYIRESDKEKIICNVDEKDIAEHLRIRL 543


>ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
            gi|223536688|gb|EEF38330.1| Ubiquitin carboxyl-terminal
            hydrolase, putative [Ricinus communis]
          Length = 1120

 Score =  606 bits (1563), Expect = e-171
 Identities = 289/342 (84%), Positives = 314/342 (91%)
 Frame = -1

Query: 1070 GATSYINSLFQTLYHIPYFRKAIYHMPTTVSDMQSRSIILALQSLFYKLQYSDNSVATKE 891
            GAT Y+NSL QTLYHIPYFRKA+YHMPTT +DM + SI LALQSLFYKLQY+D SVATKE
Sbjct: 202  GATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPTGSIPLALQSLFYKLQYNDTSVATKE 261

Query: 890  LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTIVEGTIQQLFEGHHMSCIQCMNVD 711
            LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT+VEGTIQQLFEGHHM+ I+C+NVD
Sbjct: 262  LTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVD 321

Query: 710  HSSMRKESFYDLQLDVKGCLDVYASLDKYVGVEHLEGDNKYRAGQHGLQDARKGVLFLDF 531
            + S RKESFYDLQLDVKGC DVYAS DKYV VE LEGDNKY A +HGLQDA+KGVLF+DF
Sbjct: 322  YKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEGDNKYHAEEHGLQDAKKGVLFIDF 381

Query: 530  PPVLQLQLKRFEYDFMWDTMVKINDRYEFPLELDLDRENGKYLSPNADRRVRNLYVLHSV 351
            PPVLQLQLKRFEYDFM DTMVKINDRYEFPL+LDLDRENGKYLSP ADR VRNLY LHSV
Sbjct: 382  PPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDRENGKYLSPEADRSVRNLYTLHSV 441

Query: 350  LVHSGGEHGGRYYAFIRPTLSDQWLRFDDARVTKEDMKIAVEEQYGGEEELTQTNPGFNS 171
            LVHSGG HGG YYAFIRPTLSDQW +FDD RVTKEDMK A+EEQYGGEEEL QTNPGFN+
Sbjct: 442  LVHSGGVHGGHYYAFIRPTLSDQWFKFDDERVTKEDMKRALEEQYGGEEELQQTNPGFNN 501

Query: 170  TPFRFTKYSNAYMLVYIRKTDKERIFCNVDEQDISEHLRVRL 45
             PF+FTKYSNAYMLVYIR++DK++I CNVDE+DI+EHLR+RL
Sbjct: 502  APFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRIRL 543


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