BLASTX nr result

ID: Coptis21_contig00002067 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002067
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM05612.1| pectate lyase, partial [Eucalyptus pyrocarpa]         177   8e-43
dbj|BAM05611.1| pectate lyase, partial [Eucalyptus pilularis]         177   1e-42
ref|XP_002316399.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-42
ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis ...   175   3e-42
ref|XP_004150371.1| PREDICTED: probable pectate lyase 12-like [C...   174   9e-42

>dbj|BAM05612.1| pectate lyase, partial [Eucalyptus pyrocarpa]
          Length = 334

 Score =  177 bits (449), Expect = 8e-43
 Identities = 80/107 (74%), Positives = 95/107 (88%)
 Frame = +3

Query: 3   NDFTQWEMYAIGGSGNPTINSQGNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEM 182
           NDFT+W+MYAIGGS NPTINSQGNRYTAP D +AK+VTKRV+T++ EW+DW+WR++GD M
Sbjct: 148 NDFTEWKMYAIGGSANPTINSQGNRYTAPVDADAKQVTKRVDTEENEWTDWNWRTEGDMM 207

Query: 183 VNGAFFVPSGSGAGMKYSKASSVEPKSAGLIDRLTMNAGVMGGNRDN 323
           VNGA+FVPSG G   +YSKASS+EPKSAGLID+LTMNAGV G  RDN
Sbjct: 208 VNGAYFVPSGVGLSAQYSKASSLEPKSAGLIDQLTMNAGVFGDPRDN 254


>dbj|BAM05611.1| pectate lyase, partial [Eucalyptus pilularis]
          Length = 333

 Score =  177 bits (448), Expect = 1e-42
 Identities = 80/107 (74%), Positives = 95/107 (88%)
 Frame = +3

Query: 3   NDFTQWEMYAIGGSGNPTINSQGNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEM 182
           NDFT+W+MYAIGGS NPTINSQGNRYTAP D +AK+VTKRV+T++ +W+DW+WR++GD M
Sbjct: 146 NDFTEWKMYAIGGSANPTINSQGNRYTAPVDADAKQVTKRVDTEENDWTDWNWRTEGDIM 205

Query: 183 VNGAFFVPSGSGAGMKYSKASSVEPKSAGLIDRLTMNAGVMGGNRDN 323
           VNGAFFVPSG G   +YSKASS+EPKSAGLID+LTMNAGV G  RDN
Sbjct: 206 VNGAFFVPSGVGLSAQYSKASSLEPKSAGLIDQLTMNAGVFGDPRDN 252


>ref|XP_002316399.1| predicted protein [Populus trichocarpa] gi|222865439|gb|EEF02570.1|
           predicted protein [Populus trichocarpa]
          Length = 415

 Score =  176 bits (447), Expect = 1e-42
 Identities = 81/105 (77%), Positives = 92/105 (87%)
 Frame = +3

Query: 3   NDFTQWEMYAIGGSGNPTINSQGNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEM 182
           NDFT WEMYAIGGS NPTINSQGNRYTAP+D NAKEVTKRV+T +G+W+ W+WR+DGD M
Sbjct: 311 NDFTAWEMYAIGGSANPTINSQGNRYTAPTDDNAKEVTKRVDTNEGDWAGWNWRTDGDIM 370

Query: 183 VNGAFFVPSGSGAGMKYSKASSVEPKSAGLIDRLTMNAGVMGGNR 317
           VNGAFFVPSG+G   +YSKASSVEPKSAGLI +LT+NAGV G  R
Sbjct: 371 VNGAFFVPSGAGLSAQYSKASSVEPKSAGLIQQLTLNAGVFGDPR 415


>ref|XP_002268818.1| PREDICTED: probable pectate lyase 12 [Vitis vinifera]
           gi|296085972|emb|CBI31413.3| unnamed protein product
           [Vitis vinifera]
          Length = 496

 Score =  175 bits (444), Expect = 3e-42
 Identities = 80/107 (74%), Positives = 93/107 (86%)
 Frame = +3

Query: 3   NDFTQWEMYAIGGSGNPTINSQGNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEM 182
           NDFTQWEMYAIGGS NPTINSQGNRYTAP D NAKEVTKRVET + +W++W+WR++GD M
Sbjct: 312 NDFTQWEMYAIGGSANPTINSQGNRYTAPGDINAKEVTKRVETDEEDWAEWNWRTEGDVM 371

Query: 183 VNGAFFVPSGSGAGMKYSKASSVEPKSAGLIDRLTMNAGVMGGNRDN 323
           VNGAFFVPSG G   +Y+KASSVEPKSA LI +LTMNAG + G+RD+
Sbjct: 372 VNGAFFVPSGVGLSTQYAKASSVEPKSAALIQQLTMNAGALSGSRDD 418


>ref|XP_004150371.1| PREDICTED: probable pectate lyase 12-like [Cucumis sativus]
          Length = 489

 Score =  174 bits (440), Expect = 9e-42
 Identities = 78/107 (72%), Positives = 91/107 (85%)
 Frame = +3

Query: 3   NDFTQWEMYAIGGSGNPTINSQGNRYTAPSDPNAKEVTKRVETKDGEWSDWDWRSDGDEM 182
           NDF  WEMYAIGGSGNPTINSQGNRY AP +PNAKEVTKRV+T  G+WS+W+WR++GD M
Sbjct: 315 NDFQSWEMYAIGGSGNPTINSQGNRYIAPGNPNAKEVTKRVDTNAGDWSEWNWRTEGDIM 374

Query: 183 VNGAFFVPSGSGAGMKYSKASSVEPKSAGLIDRLTMNAGVMGGNRDN 323
           VNGAFFVPSG G    Y KASS+ PKSA L+D+LT+NAGV GG+R+N
Sbjct: 375 VNGAFFVPSGEGLSNMYVKASSLPPKSAALVDQLTLNAGVFGGSREN 421


Top