BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002040
         (1589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...   576   e-162
emb|CBI37850.3| unnamed protein product [Vitis vinifera]              576   e-162
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]...   548   e-153
ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glyc...   543   e-152
ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glyc...   531   e-148

>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score =  576 bits (1484), Expect = e-162
 Identities = 304/409 (74%), Positives = 330/409 (80%), Gaps = 4/409 (0%)
 Frame = -2

Query: 1588 RYKEKKEEV-EPEADPERDQRTVFAYQISLKADEKDVFEFFSRAGKVRDVRLIMDRNSRR 1412
            R+K+KKEEV EPEADPERDQRTVFAYQI LKADE+DV+EFFSRAGKVRDVRLIMDRNSRR
Sbjct: 199  RHKDKKEEVAEPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRR 258

Query: 1411 SKGVGYIEFYDVMSVPMAIALSGQLLLGLPVMVKPSEAEKNLVQSTTAVVXXXXXXXXXX 1232
            SKGVGYIEFYD MSVPMAIALSGQ LLG PVMVKPSEAEKNLVQSTTA            
Sbjct: 259  SKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPY 318

Query: 1231 XG-ARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPLD-ESGHCKGFGFVQFARLEDAR 1058
             G ARRLYVGNLHFNITEDQLRQVFEPFG VELVQLP D E+GHCKGFGFVQFARLEDAR
Sbjct: 319  SGGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDAR 378

Query: 1057 NAQNLNGQLDIAGRTIKVSAVSDQVGMQEIGVNAXXXXXXXXXGMSLNARSRAILMQKLD 878
             AQ+LNGQLDIAGRTIKVS V+DQ G+Q+IG NA         G+SLNARSRAILMQKLD
Sbjct: 379  AAQSLNGQLDIAGRTIKVSVVTDQAGLQDIGANAGDFDDDEGGGLSLNARSRAILMQKLD 438

Query: 877  RSGVVSSITGSMATPVLNGSGLPLETATVPGM-PSTIPIVXXXXXXXXXXXXXXXXXXXG 701
            RSG    I GS+ +PVLN  GLPL TA + G  P   P+V                    
Sbjct: 439  RSGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQ 498

Query: 700  VPTVTATSIDPIGIPSECLLLKDMFDPSIETEPDFDLDIKEDVQAECSKFGLVKHIYVDK 521
            VP VT  SID IG+PSECL+LK+MFDP +ETEPDFDLDIKEDVQ ECSKFG VKHIYVDK
Sbjct: 499  VPAVTVPSIDTIGVPSECLMLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIYVDK 558

Query: 520  HSAGFVYLRFDNTQSAMKAQRALHGRWFAGKMITASYMVPQNYEAKFPD 374
            +SAGFV+LRF+NTQ+A+ AQRALHGRWFAGKMITA++M+PQNYEAKFPD
Sbjct: 559  NSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFMLPQNYEAKFPD 607


>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score =  576 bits (1484), Expect = e-162
 Identities = 304/409 (74%), Positives = 330/409 (80%), Gaps = 4/409 (0%)
 Frame = -2

Query: 1588 RYKEKKEEV-EPEADPERDQRTVFAYQISLKADEKDVFEFFSRAGKVRDVRLIMDRNSRR 1412
            R+K+KKEEV EPEADPERDQRTVFAYQI LKADE+DV+EFFSRAGKVRDVRLIMDRNSRR
Sbjct: 17   RHKDKKEEVAEPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRR 76

Query: 1411 SKGVGYIEFYDVMSVPMAIALSGQLLLGLPVMVKPSEAEKNLVQSTTAVVXXXXXXXXXX 1232
            SKGVGYIEFYD MSVPMAIALSGQ LLG PVMVKPSEAEKNLVQSTTA            
Sbjct: 77   SKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGLIGPY 136

Query: 1231 XG-ARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPLD-ESGHCKGFGFVQFARLEDAR 1058
             G ARRLYVGNLHFNITEDQLRQVFEPFG VELVQLP D E+GHCKGFGFVQFARLEDAR
Sbjct: 137  SGGARRLYVGNLHFNITEDQLRQVFEPFGTVELVQLPTDLETGHCKGFGFVQFARLEDAR 196

Query: 1057 NAQNLNGQLDIAGRTIKVSAVSDQVGMQEIGVNAXXXXXXXXXGMSLNARSRAILMQKLD 878
             AQ+LNGQLDIAGRTIKVS V+DQ G+Q+IG NA         G+SLNARSRAILMQKLD
Sbjct: 197  AAQSLNGQLDIAGRTIKVSVVTDQAGLQDIGANAGDFDDDEGGGLSLNARSRAILMQKLD 256

Query: 877  RSGVVSSITGSMATPVLNGSGLPLETATVPGM-PSTIPIVXXXXXXXXXXXXXXXXXXXG 701
            RSG    I GS+ +PVLN  GLPL TA + G  P   P+V                    
Sbjct: 257  RSGTTPGIAGSLGSPVLNNPGLPLSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQ 316

Query: 700  VPTVTATSIDPIGIPSECLLLKDMFDPSIETEPDFDLDIKEDVQAECSKFGLVKHIYVDK 521
            VP VT  SID IG+PSECL+LK+MFDP +ETEPDFDLDIKEDVQ ECSKFG VKHIYVDK
Sbjct: 317  VPAVTVPSIDTIGVPSECLMLKNMFDPKLETEPDFDLDIKEDVQDECSKFGTVKHIYVDK 376

Query: 520  HSAGFVYLRFDNTQSAMKAQRALHGRWFAGKMITASYMVPQNYEAKFPD 374
            +SAGFV+LRF+NTQ+A+ AQRALHGRWFAGKMITA++M+PQNYEAKFPD
Sbjct: 377  NSAGFVFLRFENTQAAISAQRALHGRWFAGKMITATFMLPQNYEAKFPD 425


>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
            gi|223544486|gb|EEF46005.1| splicing factor, putative
            [Ricinus communis]
          Length = 609

 Score =  548 bits (1412), Expect = e-153
 Identities = 293/404 (72%), Positives = 319/404 (78%), Gaps = 1/404 (0%)
 Frame = -2

Query: 1582 KEKKEEV-EPEADPERDQRTVFAYQISLKADEKDVFEFFSRAGKVRDVRLIMDRNSRRSK 1406
            KEKKEE  EPEADPERDQRTVFAYQI LKADE+DV+EFFSRAGKVRDVRLIMDRNSRRSK
Sbjct: 208  KEKKEEAAEPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 267

Query: 1405 GVGYIEFYDVMSVPMAIALSGQLLLGLPVMVKPSEAEKNLVQSTTAVVXXXXXXXXXXXG 1226
            GVGYIEFYDVMSVPMAIALSGQ LLG PVMVKPSEAEKNLVQSTT V            G
Sbjct: 268  GVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTTV---NAGSGPYSGG 324

Query: 1225 ARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPLDESGHCKGFGFVQFARLEDARNAQN 1046
            ARRLYVGNLHFNITEDQLRQVFEPFG VELVQLPLDE+GHCKGFGFVQFARLEDA+NA N
Sbjct: 325  ARRLYVGNLHFNITEDQLRQVFEPFGIVELVQLPLDETGHCKGFGFVQFARLEDAKNALN 384

Query: 1045 LNGQLDIAGRTIKVSAVSDQVGMQEIGVNAXXXXXXXXXGMSLNARSRAILMQKLDRSGV 866
            LNGQ++IAGR IKVS V+DQ GMQ+   NA         G++LNARSRAILMQKLDRSG 
Sbjct: 385  LNGQVEIAGRPIKVSTVTDQTGMQDSTTNAGDFDDDEGGGLALNARSRAILMQKLDRSGT 444

Query: 865  VSSITGSMATPVLNGSGLPLETATVPGMPSTIPIVXXXXXXXXXXXXXXXXXXXGVPTVT 686
             SSI GS+ T   + +GL + TA + G    IP +                         
Sbjct: 445  ASSIAGSLGTSAAS-TGLAVPTAPILGAAPVIPPIVAPLISGSAPAFPGLPGASVQLPGA 503

Query: 685  ATSIDPIGIPSECLLLKDMFDPSIETEPDFDLDIKEDVQAECSKFGLVKHIYVDKHSAGF 506
              S+D IG+PSECLLLK+MFDPSIETEPDFDLDIKEDVQ ECSKFG ++HIYVDK+SAGF
Sbjct: 504  IPSVDTIGVPSECLLLKNMFDPSIETEPDFDLDIKEDVQLECSKFGNLQHIYVDKNSAGF 563

Query: 505  VYLRFDNTQSAMKAQRALHGRWFAGKMITASYMVPQNYEAKFPD 374
            VYLRF+NTQSA+ AQRALHGRWFAGKMITA++MVPQ YE KFPD
Sbjct: 564  VYLRFENTQSAISAQRALHGRWFAGKMITATFMVPQVYETKFPD 607


>ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 597

 Score =  543 bits (1399), Expect = e-152
 Identities = 292/407 (71%), Positives = 323/407 (79%), Gaps = 2/407 (0%)
 Frame = -2

Query: 1588 RYKEKKEEV-EPEADPERDQRTVFAYQISLKADEKDVFEFFSRAGKVRDVRLIMDRNSRR 1412
            R+KEKKEE  EPEADPERDQRTVFAYQISLKADE+DV+EFFSRAGKVRDVRLIMDRNSRR
Sbjct: 203  RHKEKKEEATEPEADPERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRR 262

Query: 1411 SKGVGYIEFYDVMSVPMAIALSGQLLLGLPVMVKPSEAEKNLVQSTTAVVXXXXXXXXXX 1232
            SKGVGYIEFYDVMSVPMAIALSGQ LLG PVMVKPSEAEKNLVQSTT+V           
Sbjct: 263  SKGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPY 322

Query: 1231 XG-ARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPLDESGHCKGFGFVQFARLEDARN 1055
             G AR+LYVGNLH +ITE  +R+VFE FG VELVQLPLDESGHCKGFGFVQFARLEDARN
Sbjct: 323  SGGARKLYVGNLHVSITEADIRRVFEAFGQVELVQLPLDESGHCKGFGFVQFARLEDARN 382

Query: 1054 AQNLNGQLDIAGRTIKVSAVSDQVGMQEIGVNAXXXXXXXXXGMSLNARSRAILMQKLDR 875
            AQ+LNGQL+I GRTIKVSAV+DQ GMQE+G N          G+SLNA SRAILMQKLDR
Sbjct: 383  AQSLNGQLEIGGRTIKVSAVTDQSGMQEVGGNTGDFDDDEGGGLSLNACSRAILMQKLDR 442

Query: 874  SGVVSSITGSMATPVLNGSGLPLETATVPGMPSTIPIVXXXXXXXXXXXXXXXXXXXGVP 695
            SG  SS+ GS+    +N +GL L        P+T  I+                    +P
Sbjct: 443  SGTASSMVGSIGNSGVNNTGLNL--------PATGNILAAAPVGGLAGGGLQ------IP 488

Query: 694  TVTATSIDPIGIPSECLLLKDMFDPSIETEPDFDLDIKEDVQAECSKFGLVKHIYVDKHS 515
            T T  SIDPIG+PSECL+LK+MFDP  ETEPDFDLDIKEDV+AECSKFG +KHIYVDK S
Sbjct: 489  TATIPSIDPIGVPSECLMLKNMFDPKDETEPDFDLDIKEDVEAECSKFGALKHIYVDKKS 548

Query: 514  AGFVYLRFDNTQSAMKAQRALHGRWFAGKMITASYMVPQNYEAKFPD 374
            AGFVYLRF++TQSA+ AQ+ALHGRWFAGKMITAS+MVPQ+YE KFPD
Sbjct: 549  AGFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMVPQSYEDKFPD 595


>ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 600

 Score =  531 bits (1367), Expect = e-148
 Identities = 285/406 (70%), Positives = 315/406 (77%), Gaps = 1/406 (0%)
 Frame = -2

Query: 1588 RYKEKKEEVEPEADPERDQRTVFAYQISLKADEKDVFEFFSRAGKVRDVRLIMDRNSRRS 1409
            R+KEKKEE    ADPERDQR VFAYQISLKADE+DVFEFFSRAGKVRDVRLIMDRNSRRS
Sbjct: 207  RHKEKKEETTEPADPERDQRAVFAYQISLKADERDVFEFFSRAGKVRDVRLIMDRNSRRS 266

Query: 1408 KGVGYIEFYDVMSVPMAIALSGQLLLGLPVMVKPSEAEKNLVQSTTAVVXXXXXXXXXXX 1229
            KGVGYIEFYDVMSVPMAIALSGQ LLG PVMVKPSEAEKNLVQSTT+V            
Sbjct: 267  KGVGYIEFYDVMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYS 326

Query: 1228 G-ARRLYVGNLHFNITEDQLRQVFEPFGAVELVQLPLDESGHCKGFGFVQFARLEDARNA 1052
            G AR+LYVGNLH +ITE  +R+VFE FG VELVQLPLDESGHCKGFGFVQFARLEDARNA
Sbjct: 327  GGARKLYVGNLHISITEADIRRVFEAFGQVELVQLPLDESGHCKGFGFVQFARLEDARNA 386

Query: 1051 QNLNGQLDIAGRTIKVSAVSDQVGMQEIGVNAXXXXXXXXXGMSLNARSRAILMQKLDRS 872
            Q+LNGQL+I GRTIKVSAV+DQ GMQE G N          GMSLNA SRA+LMQKLDRS
Sbjct: 387  QSLNGQLEIGGRTIKVSAVTDQSGMQEFGGNTGDFDDDEGGGMSLNACSRAMLMQKLDRS 446

Query: 871  GVVSSITGSMATPVLNGSGLPLETATVPGMPSTIPIVXXXXXXXXXXXXXXXXXXXGVPT 692
            G  SS+ GS+   V+N +GL         +P+T  I+                    +PT
Sbjct: 447  GTASSMVGSLGNSVVNNTGL--------NLPATGNIL------AAAPVGELAGGGLQIPT 492

Query: 691  VTATSIDPIGIPSECLLLKDMFDPSIETEPDFDLDIKEDVQAECSKFGLVKHIYVDKHSA 512
             T  SID IG+ SECL+LK+MFDP  E EPDFDLDIKEDV+AECSK G +KHIYVDK SA
Sbjct: 493  ATIPSIDTIGVASECLMLKNMFDPKDEIEPDFDLDIKEDVEAECSKLGTLKHIYVDKKSA 552

Query: 511  GFVYLRFDNTQSAMKAQRALHGRWFAGKMITASYMVPQNYEAKFPD 374
            GFVYLRF++TQSA+ AQ+ALHGRWFAGKMITAS+MVPQ+YE KFPD
Sbjct: 553  GFVYLRFEDTQSAISAQQALHGRWFAGKMITASFMVPQSYEDKFPD 598