BLASTX nr result

ID: Coptis21_contig00002036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002036
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522435.1| membrane associated ring finger 1,8, putativ...   241   2e-61
ref|XP_002284912.1| PREDICTED: uncharacterized protein LOC100250...   240   5e-61
ref|XP_003517979.1| PREDICTED: uncharacterized protein LOC100812...   239   9e-61
emb|CBI31954.3| unnamed protein product [Vitis vinifera]              235   2e-59
ref|XP_002273832.1| PREDICTED: uncharacterized protein LOC100256...   235   2e-59

>ref|XP_002522435.1| membrane associated ring finger 1,8, putative [Ricinus communis]
           gi|223538320|gb|EEF39927.1| membrane associated ring
           finger 1,8, putative [Ricinus communis]
          Length = 283

 Score =  241 bits (615), Expect = 2e-61
 Identities = 126/228 (55%), Positives = 144/228 (63%), Gaps = 1/228 (0%)
 Frame = +3

Query: 105 PLIETVECRICQEEDHVKNLEAPCSCSGSLKYAHRSCVQRWCDEKKDITCEICHQTYQPG 284
           PLI+  ECRICQEED V NLE PC+CSGSLKYAHR CVQ WC+EK DITCEICH+ YQPG
Sbjct: 58  PLIKVAECRICQEEDSVTNLETPCACSGSLKYAHRKCVQHWCNEKGDITCEICHKPYQPG 117

Query: 285 YTAPVLSQPRPDDTTIDISGGWLISGTPVGLHDPRFVAMXXXXXXXXXXQYDEYAGTNAS 464
           YTAP L  P+ +DT IDI GGW ISGTP+ L DPR +A+          +YDEYA +NAS
Sbjct: 118 YTAP-LRPPQAEDTAIDIGGGWTISGTPLDLRDPRLLAIAEAERHFLEAEYDEYAASNAS 176

Query: 465 GSXXXXXXXXXXXXXXXXXXXXETXXXXXXXXXXVSTFFSIFMLRAFGFLLPFYIMACAI 644
           G+                                VSTFFS+F+LRA GFLLP YIMA AI
Sbjct: 177 GAAFCRSAALILMALLLLRHALTV--TDADGDDDVSTFFSLFLLRAAGFLLPCYIMAWAI 234

Query: 645 SVLQXXXXXXXXXXXXXSEVAFVLQSGQEQGLHFTIVPGPAVT-HPEP 785
           S+LQ             ++VAFVLQSGQ +GLHFTI  GP VT H EP
Sbjct: 235 SILQRRRQRQEAAALAATQVAFVLQSGQHRGLHFTIASGPQVTAHQEP 282


>ref|XP_002284912.1| PREDICTED: uncharacterized protein LOC100250124 [Vitis vinifera]
           gi|297733975|emb|CBI15222.3| unnamed protein product
           [Vitis vinifera]
          Length = 291

 Score =  240 bits (612), Expect = 5e-61
 Identities = 127/231 (54%), Positives = 148/231 (64%), Gaps = 2/231 (0%)
 Frame = +3

Query: 105 PLIETVECRICQEEDHVKNLEAPCSCSGSLKYAHRSCVQRWCDEKKDITCEICHQTYQPG 284
           PLI+TVECRICQEED +KNLE PC+CSGSLK+AHR CVQRWC+EK D+TCEICHQ YQPG
Sbjct: 65  PLIQTVECRICQEEDSIKNLEVPCACSGSLKFAHRKCVQRWCNEKGDVTCEICHQPYQPG 124

Query: 285 YTAPVLSQPRPDDTTIDISGGWLISGTPVGLHDPRFVAMXXXXXXXXXXQYDEYAGTNAS 464
           YTAP    P+ +D TIDIS GW ISGTP+ L+DPR +AM          +Y+EYA TNAS
Sbjct: 125 YTAP--PPPQSEDATIDISEGWTISGTPLDLNDPRLLAMAAAERHFLEAEYEEYADTNAS 182

Query: 465 GSXXXXXXXXXXXXXXXXXXXXETXXXXXXXXXXVSTFFSIFMLRAFGFLLPFYIMACAI 644
           G+                                 S FFS+F+LRA GFLLP YIMA AI
Sbjct: 183 GAAFCRSAALILMALLLLRHALN--ITNADGDDDASNFFSLFLLRAAGFLLPCYIMAWAI 240

Query: 645 SVLQ-XXXXXXXXXXXXXSEVAFVLQSGQEQGLHFTIVPGPAVT-HPEPHQ 791
           S+LQ              +EVAF+LQ+GQ +GL FTI PGPAVT H EP Q
Sbjct: 241 SILQRRRQRQEAAAALAATEVAFMLQAGQHRGLQFTIAPGPAVTPHQEPLQ 291


>ref|XP_003517979.1| PREDICTED: uncharacterized protein LOC100812998 [Glycine max]
          Length = 286

 Score =  239 bits (610), Expect = 9e-61
 Identities = 122/226 (53%), Positives = 140/226 (61%)
 Frame = +3

Query: 105 PLIETVECRICQEEDHVKNLEAPCSCSGSLKYAHRSCVQRWCDEKKDITCEICHQTYQPG 284
           PLI+  ECRICQEED V NLE PC+CSGSLKYAHR CVQ WCDEK DITCEICHQ YQPG
Sbjct: 61  PLIQMAECRICQEEDGVSNLETPCACSGSLKYAHRKCVQHWCDEKGDITCEICHQPYQPG 120

Query: 285 YTAPVLSQPRPDDTTIDISGGWLISGTPVGLHDPRFVAMXXXXXXXXXXQYDEYAGTNAS 464
           YTAP   +P P++TTIDI GGW ISGTP+ L DPR +A+          +YDEYA +NAS
Sbjct: 121 YTAPP-PRPNPEETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLDAEYDEYAASNAS 179

Query: 465 GSXXXXXXXXXXXXXXXXXXXXETXXXXXXXXXXVSTFFSIFMLRAFGFLLPFYIMACAI 644
           G+                                 S+FFS+F+LRA GFLLP YIMA AI
Sbjct: 180 GAAFCRSAALILMALLLLRHALSVSDGDNSDDDP-SSFFSLFLLRAAGFLLPCYIMAWAI 238

Query: 645 SVLQXXXXXXXXXXXXXSEVAFVLQSGQEQGLHFTIVPGPAVTHPE 782
           S+LQ             ++VAFVLQSGQ +GL F I PGP   H E
Sbjct: 239 SILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFAIAPGPPTLHQE 284


>emb|CBI31954.3| unnamed protein product [Vitis vinifera]
          Length = 591

 Score =  235 bits (599), Expect = 2e-59
 Identities = 117/226 (51%), Positives = 138/226 (61%)
 Frame = +3

Query: 105  PLIETVECRICQEEDHVKNLEAPCSCSGSLKYAHRSCVQRWCDEKKDITCEICHQTYQPG 284
            P ++ +ECRICQEED ++NLE PC+CSGSLKYAHR CVQRWC+EK DI CEICHQ YQPG
Sbjct: 364  PFLKMMECRICQEEDSLENLETPCACSGSLKYAHRKCVQRWCNEKGDIICEICHQPYQPG 423

Query: 285  YTAPVLSQPRPDDTTIDISGGWLISGTPVGLHDPRFVAMXXXXXXXXXXQYDEYAGTNAS 464
            YTAP    P P+DT IDI GGW ISGTP+ L DPR +AM          +YDEY  TNA+
Sbjct: 424  YTAPP-PPPHPEDTAIDIGGGWTISGTPLDLRDPRLLAMAEAERHFLEAEYDEYTATNAT 482

Query: 465  GSXXXXXXXXXXXXXXXXXXXXETXXXXXXXXXXVSTFFSIFMLRAFGFLLPFYIMACAI 644
            G+                                 STFFS+F+LRA GFLLP YIMA AI
Sbjct: 483  GAAFCRSVALILMALLLLRHALTITDADTDGDDDTSTFFSLFLLRAAGFLLPCYIMAWAI 542

Query: 645  SVLQXXXXXXXXXXXXXSEVAFVLQSGQEQGLHFTIVPGPAVTHPE 782
            S+LQ             ++VAFVLQSGQ +GL FT+ P   V  P+
Sbjct: 543  SILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFTVAPAHVVAPPQ 588


>ref|XP_002273832.1| PREDICTED: uncharacterized protein LOC100256824 [Vitis vinifera]
           gi|147785386|emb|CAN70908.1| hypothetical protein
           VITISV_040117 [Vitis vinifera]
          Length = 279

 Score =  235 bits (599), Expect = 2e-59
 Identities = 117/226 (51%), Positives = 138/226 (61%)
 Frame = +3

Query: 105 PLIETVECRICQEEDHVKNLEAPCSCSGSLKYAHRSCVQRWCDEKKDITCEICHQTYQPG 284
           P ++ +ECRICQEED ++NLE PC+CSGSLKYAHR CVQRWC+EK DI CEICHQ YQPG
Sbjct: 52  PFLKMMECRICQEEDSLENLETPCACSGSLKYAHRKCVQRWCNEKGDIICEICHQPYQPG 111

Query: 285 YTAPVLSQPRPDDTTIDISGGWLISGTPVGLHDPRFVAMXXXXXXXXXXQYDEYAGTNAS 464
           YTAP    P P+DT IDI GGW ISGTP+ L DPR +AM          +YDEY  TNA+
Sbjct: 112 YTAPP-PPPHPEDTAIDIGGGWTISGTPLDLRDPRLLAMAEAERHFLEAEYDEYTATNAT 170

Query: 465 GSXXXXXXXXXXXXXXXXXXXXETXXXXXXXXXXVSTFFSIFMLRAFGFLLPFYIMACAI 644
           G+                                 STFFS+F+LRA GFLLP YIMA AI
Sbjct: 171 GAAFCRSVALILMALLLLRHALTITDADTDGDDDTSTFFSLFLLRAAGFLLPCYIMAWAI 230

Query: 645 SVLQXXXXXXXXXXXXXSEVAFVLQSGQEQGLHFTIVPGPAVTHPE 782
           S+LQ             ++VAFVLQSGQ +GL FT+ P   V  P+
Sbjct: 231 SILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFTVAPAHVVAPPQ 276


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