BLASTX nr result

ID: Coptis21_contig00002034 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002034
         (1446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511539.1| conserved hypothetical protein [Ricinus comm...   125   3e-26
ref|XP_004154985.1| PREDICTED: uncharacterized protein LOC101230...   125   4e-26
ref|XP_004138154.1| PREDICTED: uncharacterized protein LOC101218...   124   5e-26
emb|CAN62104.1| hypothetical protein VITISV_033313 [Vitis vinifera]   124   6e-26
ref|XP_002273979.1| PREDICTED: uncharacterized protein LOC100241...   122   2e-25

>ref|XP_002511539.1| conserved hypothetical protein [Ricinus communis]
            gi|223550654|gb|EEF52141.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 357

 Score =  125 bits (314), Expect = 3e-26
 Identities = 67/121 (55%), Positives = 86/121 (71%), Gaps = 5/121 (4%)
 Frame = +3

Query: 1095 RGKPTSNVSKSVSVLDLPANDKS-AKPLKRLCIPAKSSISPTPKSTGTITPLSETIKNGS 1271
            R +   +VS+S+ VLDLP  +KS AKP +RL +P KS ++ T K  GTITP+SE     S
Sbjct: 48   RARSVPSVSRSMGVLDLPGKEKSSAKPPRRLSVPIKSGVAATAKPLGTITPISEARAKRS 107

Query: 1272 IKGQGSS----SEKRVSMSRRKFILISSASYWLSQIKLSESVAKHSVSLGFFKLALESGC 1439
              GQG S    S+   + SR+KF  ++S+SYWLSQIKLSES AKH++SLGFFKLALE+GC
Sbjct: 108  TNGQGKSETPLSDVSRTSSRKKFNALASSSYWLSQIKLSESAAKHTISLGFFKLALEAGC 167

Query: 1440 E 1442
            E
Sbjct: 168  E 168


>ref|XP_004154985.1| PREDICTED: uncharacterized protein LOC101230237 [Cucumis sativus]
          Length = 356

 Score =  125 bits (313), Expect = 4e-26
 Identities = 68/117 (58%), Positives = 85/117 (72%), Gaps = 1/117 (0%)
 Frame = +3

Query: 1095 RGKPTSNVSKSVSVLDLPANDKSAKPLKRLCIPAKSSISPTPKSTGTITPLSETIKNGSI 1274
            RG+  S+VSKSV VL+L A DKSAKP +RL IP K+ +SPT K  G ITP+SE  +    
Sbjct: 54   RGRSVSSVSKSVGVLELSAKDKSAKPPRRLSIPTKN-VSPTRKLVGNITPISEVRRTARS 112

Query: 1275 KGQGSSSEKRVSMSRRK-FILISSASYWLSQIKLSESVAKHSVSLGFFKLALESGCE 1442
            +G+  +     S S +K F L+SS SYWLSQIKLSE+ +KHSVSLGFFKLALE+GC+
Sbjct: 113  QGKSDTPVSDFSRSSKKTFHLLSSTSYWLSQIKLSEAASKHSVSLGFFKLALEAGCK 169


>ref|XP_004138154.1| PREDICTED: uncharacterized protein LOC101218840 [Cucumis sativus]
          Length = 356

 Score =  124 bits (312), Expect = 5e-26
 Identities = 68/117 (58%), Positives = 85/117 (72%), Gaps = 1/117 (0%)
 Frame = +3

Query: 1095 RGKPTSNVSKSVSVLDLPANDKSAKPLKRLCIPAKSSISPTPKSTGTITPLSETIKNGSI 1274
            RG+  S+VSKSV VL+L A DKSAKP +RL IP K+ +SPT K  G ITP+SE  +    
Sbjct: 54   RGRSVSSVSKSVGVLELSAKDKSAKPPRRLSIPTKN-LSPTRKLVGNITPISEVRRTARS 112

Query: 1275 KGQGSSSEKRVSMSRRK-FILISSASYWLSQIKLSESVAKHSVSLGFFKLALESGCE 1442
            +G+  +     S S +K F L+SS SYWLSQIKLSE+ +KHSVSLGFFKLALE+GC+
Sbjct: 113  QGKSDTPVSDFSRSSKKTFHLLSSTSYWLSQIKLSEAASKHSVSLGFFKLALEAGCK 169


>emb|CAN62104.1| hypothetical protein VITISV_033313 [Vitis vinifera]
          Length = 233

 Score =  124 bits (311), Expect = 6e-26
 Identities = 69/121 (57%), Positives = 83/121 (68%), Gaps = 4/121 (3%)
 Frame = +3

Query: 1095 RGKPTSNVSKSVSVLDLPANDKSAKPLKRLCIPAKSSISPTPKSTGTITPLSETIKNGSI 1274
            RG+  S VS+SVSVLD    D +AKP +R  IPAKS++SP  K  G ITP+SET    S+
Sbjct: 69   RGRIVSKVSQSVSVLDSSTKDTAAKPPRRFSIPAKSNVSPHMKPAGNITPISETRAKRSV 128

Query: 1275 KGQGSS----SEKRVSMSRRKFILISSASYWLSQIKLSESVAKHSVSLGFFKLALESGCE 1442
              QG      S+   S +RR    ISSA+YWLSQIKLSES A HS+SLGFFKLALE+GC+
Sbjct: 129  TSQGKIATPVSDVSKSGNRRNSSYISSATYWLSQIKLSESAAMHSISLGFFKLALEAGCK 188

Query: 1443 V 1445
            V
Sbjct: 189  V 189


>ref|XP_002273979.1| PREDICTED: uncharacterized protein LOC100241687 [Vitis vinifera]
            gi|297734009|emb|CBI15256.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  122 bits (307), Expect = 2e-25
 Identities = 68/120 (56%), Positives = 82/120 (68%), Gaps = 4/120 (3%)
 Frame = +3

Query: 1095 RGKPTSNVSKSVSVLDLPANDKSAKPLKRLCIPAKSSISPTPKSTGTITPLSETIKNGSI 1274
            RG+  S VS+SVSVLD    D +AKP +R  IPAKS++SP  K  G ITP+SET    S+
Sbjct: 45   RGRIVSKVSQSVSVLDSSTKDTAAKPPRRFSIPAKSNVSPHMKPAGNITPISETRAKRSV 104

Query: 1275 KGQGSS----SEKRVSMSRRKFILISSASYWLSQIKLSESVAKHSVSLGFFKLALESGCE 1442
              QG      S+   S +RR    ISSA+YWLSQIKLSES A HS+SLGFFKLALE+GC+
Sbjct: 105  TNQGKIATPVSDVSKSGNRRNSSYISSATYWLSQIKLSESAAMHSISLGFFKLALEAGCK 164


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