BLASTX nr result

ID: Coptis21_contig00002028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002028
         (1050 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329365.1| predicted protein [Populus trichocarpa] gi|2...   150   7e-34
ref|XP_002517959.1| conserved hypothetical protein [Ricinus comm...   147   3e-33
ref|XP_002319915.1| predicted protein [Populus trichocarpa] gi|2...   140   5e-31
ref|XP_004154603.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   139   1e-30
ref|XP_004139934.1| PREDICTED: uncharacterized protein LOC101222...   139   1e-30

>ref|XP_002329365.1| predicted protein [Populus trichocarpa] gi|222870415|gb|EEF07546.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  150 bits (378), Expect = 7e-34
 Identities = 67/104 (64%), Positives = 82/104 (78%)
 Frame = +2

Query: 737  MHNERGSQDSNLKSFLDCITPVVPSQYLPWKSIKNLNRIWHPWEQETIEYFNLADLWSSF 916
            M  ++GS  SNL  FL C TP+VPSQ L  + I+NLNR+WHPWE++T+EYF L DLW+ +
Sbjct: 1    MFLDKGSMQSNLDCFLHCTTPLVPSQSLHKREIRNLNRLWHPWERDTVEYFTLGDLWNCY 60

Query: 917  GEWSAYGAGARIALDSEETVVQYYVPYLSAIQIFTSTRPITSYR 1048
             EWSAYGAG  IALD+ ET+VQYYVPYLSAIQIFTS  P+ S+R
Sbjct: 61   DEWSAYGAGVPIALDNGETLVQYYVPYLSAIQIFTSNSPVNSFR 104


>ref|XP_002517959.1| conserved hypothetical protein [Ricinus communis]
            gi|223542941|gb|EEF44477.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 317

 Score =  147 bits (372), Expect = 3e-33
 Identities = 65/101 (64%), Positives = 80/101 (79%)
 Frame = +2

Query: 746  ERGSQDSNLKSFLDCITPVVPSQYLPWKSIKNLNRIWHPWEQETIEYFNLADLWSSFGEW 925
            ++GS  SNL  FL C TP+VPSQ+LP   I+NLNR+WHPWE++T+EYF L DLW+ F EW
Sbjct: 4    DKGSAQSNLDCFLHCTTPLVPSQFLPKTEIRNLNRLWHPWERDTVEYFTLGDLWNCFDEW 63

Query: 926  SAYGAGARIALDSEETVVQYYVPYLSAIQIFTSTRPITSYR 1048
            SAYGAG  IAL++ ET+VQYYVPYLSAIQIFTS   +  +R
Sbjct: 64   SAYGAGVPIALNNGETLVQYYVPYLSAIQIFTSNSSLNGFR 104


>ref|XP_002319915.1| predicted protein [Populus trichocarpa] gi|222858291|gb|EEE95838.1|
            predicted protein [Populus trichocarpa]
          Length = 317

 Score =  140 bits (353), Expect = 5e-31
 Identities = 63/104 (60%), Positives = 78/104 (75%)
 Frame = +2

Query: 737  MHNERGSQDSNLKSFLDCITPVVPSQYLPWKSIKNLNRIWHPWEQETIEYFNLADLWSSF 916
            M  E+GS  SNL  FL C TP V SQ+L     +NLNR+WHPWE++T+EYF L DLW+ +
Sbjct: 1    MFLEKGSMQSNLDCFLHCTTPRVQSQFLAKSETRNLNRLWHPWERDTVEYFTLGDLWNFY 60

Query: 917  GEWSAYGAGARIALDSEETVVQYYVPYLSAIQIFTSTRPITSYR 1048
             EWSAYGAG  I L+++ET+VQYYVPYLSAIQIFTS   + S+R
Sbjct: 61   DEWSAYGAGIPIVLNNDETLVQYYVPYLSAIQIFTSNSSVNSFR 104


>ref|XP_004154603.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101222318 [Cucumis
            sativus]
          Length = 316

 Score =  139 bits (350), Expect = 1e-30
 Identities = 62/101 (61%), Positives = 77/101 (76%)
 Frame = +2

Query: 746  ERGSQDSNLKSFLDCITPVVPSQYLPWKSIKNLNRIWHPWEQETIEYFNLADLWSSFGEW 925
            ++ S  SNL  FL C TPVV SQ+LP   I+NLNR+WHPWE+E +EYF L DLW+ + EW
Sbjct: 4    DKVSMQSNLGCFLHCTTPVVNSQFLPKSEIRNLNRLWHPWEREKVEYFTLGDLWNCYDEW 63

Query: 926  SAYGAGARIALDSEETVVQYYVPYLSAIQIFTSTRPITSYR 1048
            SAYGAG  IA+++ ET+VQYYVPYLSAIQIFTS   +  +R
Sbjct: 64   SAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTVNGFR 104


>ref|XP_004139934.1| PREDICTED: uncharacterized protein LOC101222318 [Cucumis sativus]
          Length = 316

 Score =  139 bits (350), Expect = 1e-30
 Identities = 62/101 (61%), Positives = 77/101 (76%)
 Frame = +2

Query: 746  ERGSQDSNLKSFLDCITPVVPSQYLPWKSIKNLNRIWHPWEQETIEYFNLADLWSSFGEW 925
            ++ S  SNL  FL C TPVV SQ+LP   I+NLNR+WHPWE+E +EYF L DLW+ + EW
Sbjct: 4    DKVSMQSNLGCFLHCTTPVVNSQFLPKSEIRNLNRLWHPWEREKVEYFTLGDLWNCYDEW 63

Query: 926  SAYGAGARIALDSEETVVQYYVPYLSAIQIFTSTRPITSYR 1048
            SAYGAG  IA+++ ET+VQYYVPYLSAIQIFTS   +  +R
Sbjct: 64   SAYGAGVPIAVNNGETLVQYYVPYLSAIQIFTSNSTVNGFR 104


Top