BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002012
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]   102   1e-38
ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containi...   102   1e-38
ref|XP_002518774.1| pentatricopeptide repeat-containing protein,...    91   1e-32
emb|CAN64107.1| hypothetical protein VITISV_013147 [Vitis vinifera]   100   9e-31
ref|XP_002279824.1| PREDICTED: pentatricopeptide repeat-containi...   100   9e-31

>emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
          Length = 627

 Score =  102 bits (255), Expect(2) = 1e-38
 Identities = 46/83 (55%), Positives = 57/83 (68%)
 Frame = -3

Query: 518 GYNADFNVFYELLNVCGNPKYLDEGKKVHSLLFKSQKRGDLVLLNKLIEMYGKCESMNEA 339
           G  AD   FY L N CG+PK L+E KKVH    +S  R DL L NK++EMYG C SM +A
Sbjct: 277 GVRADAQCFYALFNSCGSPKLLEEAKKVHDFFLQSTFRSDLQLNNKVLEMYGNCGSMTDA 336

Query: 338 KHVFERMLDRDLDSWHAMMNGYA 270
           + VF+ M +RD+DSWH M+NGYA
Sbjct: 337 RRVFDHMTNRDMDSWHLMINGYA 359



 Score = 82.0 bits (201), Expect(2) = 1e-38
 Identities = 36/51 (70%), Positives = 44/51 (86%)
 Frame = -2

Query: 153 RKLGLKPNEKTFLAVFAACGSADAIEECFLHFDLMKNEYGISPTVEHYVGI 1
           RKLGL+PNE+TFLAV + C SA+A+EE F+HF+ MK EYGI+PT EHYVGI
Sbjct: 375 RKLGLEPNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVGI 425


>ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
           [Vitis vinifera]
          Length = 593

 Score =  102 bits (255), Expect(2) = 1e-38
 Identities = 46/83 (55%), Positives = 57/83 (68%)
 Frame = -3

Query: 518 GYNADFNVFYELLNVCGNPKYLDEGKKVHSLLFKSQKRGDLVLLNKLIEMYGKCESMNEA 339
           G  AD   FY L N CG+PK L+E KKVH    +S  R DL L NK++EMYG C SM +A
Sbjct: 243 GVRADAQCFYALFNSCGSPKLLEEAKKVHDFFLQSTFRSDLQLNNKVLEMYGNCGSMTDA 302

Query: 338 KHVFERMLDRDLDSWHAMMNGYA 270
           + VF+ M +RD+DSWH M+NGYA
Sbjct: 303 RRVFDHMANRDMDSWHLMINGYA 325



 Score = 82.0 bits (201), Expect(2) = 1e-38
 Identities = 36/51 (70%), Positives = 44/51 (86%)
 Frame = -2

Query: 153 RKLGLKPNEKTFLAVFAACGSADAIEECFLHFDLMKNEYGISPTVEHYVGI 1
           RKLGL+PNE+TFLAV + C SA+A+EE F+HF+ MK EYGI+PT EHYVGI
Sbjct: 341 RKLGLEPNEQTFLAVLSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVGI 391


>ref|XP_002518774.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542155|gb|EEF43699.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 573

 Score = 90.9 bits (224), Expect(2) = 1e-32
 Identities = 42/87 (48%), Positives = 57/87 (65%)
 Frame = -3

Query: 527 LGNGYNADFNVFYELLNVCGNPKYLDEGKKVHSLLFKSQKRGDLVLLNKLIEMYGKCESM 348
           +  G  AD + FY L  +CG    +++ KKVH    +S  RGD+ L  K+IEMYGKC SM
Sbjct: 289 MDKGVKADADCFYALFELCGK---IEDAKKVHDYFLQSTCRGDVRLNKKVIEMYGKCGSM 345

Query: 347 NEAKHVFERMLDRDLDSWHAMMNGYAA 267
            +A+ VF+ M DRD+D WH M+NGYA+
Sbjct: 346 TDARRVFDHMKDRDIDLWHLMINGYAS 372



 Score = 74.3 bits (181), Expect(2) = 1e-32
 Identities = 32/51 (62%), Positives = 41/51 (80%)
 Frame = -2

Query: 153 RKLGLKPNEKTFLAVFAACGSADAIEECFLHFDLMKNEYGISPTVEHYVGI 1
           R+ GLKP  +TFLAV +AC SA+A+EE FLHF+ MKNEYG +P  EHY+G+
Sbjct: 387 RQSGLKPTAETFLAVLSACASAEAVEEGFLHFESMKNEYGFNPGTEHYLGV 437


>emb|CAN64107.1| hypothetical protein VITISV_013147 [Vitis vinifera]
          Length = 497

 Score = 99.8 bits (247), Expect(2) = 9e-31
 Identities = 45/87 (51%), Positives = 64/87 (73%)
 Frame = -3

Query: 527 LGNGYNADFNVFYELLNVCGNPKYLDEGKKVHSLLFKSQKRGDLVLLNKLIEMYGKCESM 348
           +G G  A++ VF  +L+ CG  K L+ G++VH LL +S+  GD+ L NKLIEMYG+C SM
Sbjct: 125 MGQGVCAEYGVFCAMLSSCGKTKSLEVGRRVHDLLARSKFGGDVELNNKLIEMYGRCGSM 184

Query: 347 NEAKHVFERMLDRDLDSWHAMMNGYAA 267
            +A+ VF+RM +R++ SWH M+NGYAA
Sbjct: 185 RDARRVFDRMRERNMSSWHLMINGYAA 211



 Score = 58.9 bits (141), Expect(2) = 9e-31
 Identities = 27/51 (52%), Positives = 39/51 (76%)
 Frame = -2

Query: 153 RKLGLKPNEKTFLAVFAACGSADAIEECFLHFDLMKNEYGISPTVEHYVGI 1
           RK+GL+P  +TF+AV +ACGS   +EE  ++F+LMK E GI P +EHY+G+
Sbjct: 226 RKVGLRPVGETFVAVLSACGS---VEEGLMYFELMKKECGIIPGIEHYLGV 273


>ref|XP_002279824.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15690-like [Vitis vinifera]
          Length = 476

 Score = 99.8 bits (247), Expect(2) = 9e-31
 Identities = 45/87 (51%), Positives = 64/87 (73%)
 Frame = -3

Query: 527 LGNGYNADFNVFYELLNVCGNPKYLDEGKKVHSLLFKSQKRGDLVLLNKLIEMYGKCESM 348
           +G G  A++ VF  +L+ CG  K L+ G++VH LL +S+  GD+ L NKLIEMYG+C SM
Sbjct: 123 MGQGVCAEYGVFCAMLSSCGKTKSLEVGRRVHDLLARSKFGGDVELNNKLIEMYGRCGSM 182

Query: 347 NEAKHVFERMLDRDLDSWHAMMNGYAA 267
            +A+ VF+RM +R++ SWH M+NGYAA
Sbjct: 183 RDARRVFDRMRERNMSSWHLMINGYAA 209



 Score = 58.9 bits (141), Expect(2) = 9e-31
 Identities = 27/51 (52%), Positives = 39/51 (76%)
 Frame = -2

Query: 153 RKLGLKPNEKTFLAVFAACGSADAIEECFLHFDLMKNEYGISPTVEHYVGI 1
           RK+GL+P  +TF+AV +ACGS   +EE  ++F+LMK E GI P +EHY+G+
Sbjct: 224 RKVGLRPVGETFVAVLSACGS---VEEGLMYFELMKKECGIIPGIEHYLGV 271