BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002010
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]   145   3e-33
ref|XP_002518774.1| pentatricopeptide repeat-containing protein,...   141   6e-32
ref|NP_565377.1| pentatricopeptide repeat-containing protein [Ar...   139   2e-31
ref|XP_002885974.1| hypothetical protein ARALYDRAFT_480424 [Arab...   138   5e-31

>ref|XP_002285135.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15690
           [Vitis vinifera]
          Length = 593

 Score =  145 bits (367), Expect = 3e-33
 Identities = 63/96 (65%), Positives = 82/96 (85%)
 Frame = -1

Query: 288 CESMNEAKQVFERMLDRDLDSWHAMMNGYAANGLGDDGLQLFEEMRKLGLKPNEKTFLAV 109
           C SM +A++VF+ M +RD+DSWH M+NGYA N +GDDGLQL+E+MRKLGL+PNE+TFLAV
Sbjct: 296 CGSMTDARRVFDHMANRDMDSWHLMINGYANNAMGDDGLQLYEQMRKLGLEPNEQTFLAV 355

Query: 108 FAACGSADAIEECFLHFDLMKNEYGISPSVEHYVGI 1
            + C SA+A+EE F+HF+ MK EYGI+P+ EHYVGI
Sbjct: 356 LSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVGI 391


>emb|CAN70199.1| hypothetical protein VITISV_021220 [Vitis vinifera]
          Length = 627

 Score =  145 bits (367), Expect = 3e-33
 Identities = 63/96 (65%), Positives = 82/96 (85%)
 Frame = -1

Query: 288 CESMNEAKQVFERMLDRDLDSWHAMMNGYAANGLGDDGLQLFEEMRKLGLKPNEKTFLAV 109
           C SM +A++VF+ M +RD+DSWH M+NGYA N +GDDGLQL+E+MRKLGL+PNE+TFLAV
Sbjct: 330 CGSMTDARRVFDHMTNRDMDSWHLMINGYANNAMGDDGLQLYEQMRKLGLEPNEQTFLAV 389

Query: 108 FAACGSADAIEECFLHFDLMKNEYGISPSVEHYVGI 1
            + C SA+A+EE F+HF+ MK EYGI+P+ EHYVGI
Sbjct: 390 LSTCASAEAVEEGFIHFESMKTEYGITPTFEHYVGI 425


>ref|XP_002518774.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542155|gb|EEF43699.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 573

 Score =  141 bits (355), Expect = 6e-32
 Identities = 61/96 (63%), Positives = 79/96 (82%)
 Frame = -1

Query: 288 CESMNEAKQVFERMLDRDLDSWHAMMNGYAANGLGDDGLQLFEEMRKLGLKPNEKTFLAV 109
           C SM +A++VF+ M DRD+D WH M+NGYA+N LGD+GLQLFE+MR+ GLKP  +TFLAV
Sbjct: 342 CGSMTDARRVFDHMKDRDIDLWHLMINGYASNNLGDEGLQLFEQMRQSGLKPTAETFLAV 401

Query: 108 FAACGSADAIEECFLHFDLMKNEYGISPSVEHYVGI 1
            +AC SA+A+EE FLHF+ MKNEYG +P  EHY+G+
Sbjct: 402 LSACASAEAVEEGFLHFESMKNEYGFNPGTEHYLGV 437


>ref|NP_565377.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75216221|sp|Q9ZQE5.2|PP153_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g15690 gi|14335136|gb|AAK59848.1| At2g15690/F9O13.24
           [Arabidopsis thaliana] gi|20197709|gb|AAD17413.2|
           Expressed protein [Arabidopsis thaliana]
           gi|29028728|gb|AAO64743.1| At2g15690/F9O13.24
           [Arabidopsis thaliana] gi|330251336|gb|AEC06430.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 579

 Score =  139 bits (350), Expect = 2e-31
 Identities = 61/96 (63%), Positives = 75/96 (78%)
 Frame = -1

Query: 288 CESMNEAKQVFERMLDRDLDSWHAMMNGYAANGLGDDGLQLFEEMRKLGLKPNEKTFLAV 109
           C S+ +AK+VF+ M+D+D+DSWH MM  Y+ NG+GDD L LFEEM K GLKPNE+TFL V
Sbjct: 284 CSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTV 343

Query: 108 FAACGSADAIEECFLHFDLMKNEYGISPSVEHYVGI 1
           F AC +   IEE FLHFD MKNE+GISP  EHY+G+
Sbjct: 344 FLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGV 379


>ref|XP_002885974.1| hypothetical protein ARALYDRAFT_480424 [Arabidopsis lyrata subsp.
           lyrata] gi|297331814|gb|EFH62233.1| hypothetical protein
           ARALYDRAFT_480424 [Arabidopsis lyrata subsp. lyrata]
          Length = 548

 Score =  138 bits (347), Expect = 5e-31
 Identities = 59/96 (61%), Positives = 75/96 (78%)
 Frame = -1

Query: 288 CESMNEAKQVFERMLDRDLDSWHAMMNGYAANGLGDDGLQLFEEMRKLGLKPNEKTFLAV 109
           C S+ +AK+VF+ M+D+D+DSWH MM  Y+ NG+GDD L LFEEM K GLKPNE+TFL V
Sbjct: 253 CRSVTDAKRVFDHMVDKDMDSWHLMMRAYSDNGMGDDALHLFEEMTKQGLKPNEETFLTV 312

Query: 108 FAACGSADAIEECFLHFDLMKNEYGISPSVEHYVGI 1
           F AC +   I+E FLHFD M+NE+GISP  EHY+G+
Sbjct: 313 FLACATVGGIKEAFLHFDSMRNEHGISPKTEHYLGV 348