BLASTX nr result

ID: Coptis21_contig00002006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002006
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269370.2| PREDICTED: peroxisome biogenesis protein 6-l...    72   6e-11
emb|CBI32241.3| unnamed protein product [Vitis vinifera]               72   6e-11
ref|XP_002520662.1| peroxisome assembly factor-2, putative [Rici...    72   6e-11
ref|XP_002321026.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_004160540.1| PREDICTED: peroxisome biogenesis protein 6-l...    70   2e-10

>ref|XP_002269370.2| PREDICTED: peroxisome biogenesis protein 6-like [Vitis vinifera]
          Length = 935

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/54 (72%), Positives = 41/54 (75%)
 Frame = -1

Query: 222 GLNDSTQDLFIIGASNKLDFTDPGIQPLLRLGRFDKLLYVGVNSDVS*HQRGYK 61
           GLNDSTQDLFIIGASN+ D  DP    LLR GRFDKLLYVGVNSD S  +R  K
Sbjct: 794 GLNDSTQDLFIIGASNRPDLIDPA---LLRPGRFDKLLYVGVNSDTSYRERVLK 844


>emb|CBI32241.3| unnamed protein product [Vitis vinifera]
          Length = 938

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/54 (72%), Positives = 41/54 (75%)
 Frame = -1

Query: 222 GLNDSTQDLFIIGASNKLDFTDPGIQPLLRLGRFDKLLYVGVNSDVS*HQRGYK 61
           GLNDSTQDLFIIGASN+ D  DP    LLR GRFDKLLYVGVNSD S  +R  K
Sbjct: 787 GLNDSTQDLFIIGASNRPDLIDPA---LLRPGRFDKLLYVGVNSDTSYRERVLK 837


>ref|XP_002520662.1| peroxisome assembly factor-2, putative [Ricinus communis]
           gi|223540047|gb|EEF41624.1| peroxisome assembly
           factor-2, putative [Ricinus communis]
          Length = 920

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/54 (72%), Positives = 41/54 (75%)
 Frame = -1

Query: 222 GLNDSTQDLFIIGASNKLDFTDPGIQPLLRLGRFDKLLYVGVNSDVS*HQRGYK 61
           GLNDSTQDLFIIGASN+ D  DP    LLR GRFDKLLYVGVNSD S  +R  K
Sbjct: 779 GLNDSTQDLFIIGASNRPDLIDPA---LLRPGRFDKLLYVGVNSDASYRERVLK 829


>ref|XP_002321026.1| predicted protein [Populus trichocarpa] gi|222861799|gb|EEE99341.1|
           predicted protein [Populus trichocarpa]
          Length = 930

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/51 (74%), Positives = 40/51 (78%)
 Frame = -1

Query: 222 GLNDSTQDLFIIGASNKLDFTDPGIQPLLRLGRFDKLLYVGVNSDVS*HQR 70
           GLNDSTQDLFIIGASN+ D  DP    LLR GRFDKLLYVGVNSD S  +R
Sbjct: 780 GLNDSTQDLFIIGASNRPDLIDPA---LLRPGRFDKLLYVGVNSDASYRER 827


>ref|XP_004160540.1| PREDICTED: peroxisome biogenesis protein 6-like [Cucumis sativus]
          Length = 938

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 42/78 (53%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
 Frame = -1

Query: 222  GLNDSTQDLFIIGASNKLDFTDPGIQPLLRLGRFDKLLYVGVNSDVS*HQRGYK----KY 55
            GLNDS+QDLFIIGASN+ D  DP    LLR GRFDKLLYVGVNS+ S  +R  K    K+
Sbjct: 788  GLNDSSQDLFIIGASNRPDLIDPA---LLRPGRFDKLLYVGVNSEASYRERVLKALTRKF 844

Query: 54   EVIYGIYFLVLVEVVLPN 1
            ++   I  L + +   PN
Sbjct: 845  KLHENISLLSIAKKCPPN 862


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