BLASTX nr result
ID: Coptis21_contig00002005
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00002005
(1842 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACM78591.1| granule-bound starch synthase [Nelumbo nucifera] 593 e-167
gb|ACH72975.1| granule-bound starch synthase [Nelumbo nucifera] 593 e-167
gb|ACB97678.1| granule bound starch synthase Ib precursor [Malus... 583 e-164
ref|XP_002317054.1| predicted protein [Populus trichocarpa] gi|2... 582 e-163
gb|AFA36448.1| GBSSII-2 [Prunus persica] 579 e-162
>gb|ACM78591.1| granule-bound starch synthase [Nelumbo nucifera]
Length = 615
Score = 593 bits (1530), Expect = e-167
Identities = 328/615 (53%), Positives = 374/615 (60%), Gaps = 33/615 (5%)
Frame = +1
Query: 13 MASVNASHYVSRTLQGRCGGTS--EVKTTVTQAAFKNQTMTHDGLRSLNKVDLLCVRNKS 186
MA+V AS +VS + GG S + KT + Q +NQTMTH GLRS+N VD L +R +
Sbjct: 1 MATVTASKFVSTSSLVSYGGMSGSQPKTALAQIGLRNQTMTHHGLRSVNNVDKLNLRANA 60
Query: 187 EGITRKTKKNVYVAKTAKRSGEIVCSGGMNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366
+ T + K + AK I C GMN+
Sbjct: 61 KTTTGQAKGKECKTRNAKERSVIRCGSGMNLVFVGAEVGPWSKTGGLGDVLGGLPPAMAA 120
Query: 367 XXXX-----PRHDQYKDAWDTNVTIQVKVGDTTETVRFFHSYKRGVDRVFVDHPMFLEKV 531
PR+DQYKDAWDT+V +++KVGD ETVRFFH YKRGVDRVFVDHPMFLEKV
Sbjct: 121 NGHRVMTVAPRYDQYKDAWDTSVLVEIKVGDRIETVRFFHCYKRGVDRVFVDHPMFLEKV 180
Query: 532 WGKSESKIYGPTAGDDYEDNQLRFSLLCQAALEAPRVLNLNSSKSFSGPYGEDVVFIAND 711
WGK+ SKIYGP AG+DY DNQLRFSLLCQAALEAPRVLNLNSSK FSGPYGEDVVFI ND
Sbjct: 181 WGKTGSKIYGPMAGEDYSDNQLRFSLLCQAALEAPRVLNLNSSKHFSGPYGEDVVFICND 240
Query: 712 WHTAILPCYLKSMYQSQGIYKSAKVAFCIHNISYQGRFPFSDFSLLNLPDSFRSSFDFMD 891
WHTA+LPCYLK+MY+S+GIY++AKVAFCIHNI+YQGRF FSDFSLLNLPD F+SSFDF+D
Sbjct: 241 WHTALLPCYLKTMYKSRGIYRNAKVAFCIHNIAYQGRFSFSDFSLLNLPDEFKSSFDFID 300
Query: 892 GY-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRKXXXXXXXNG 1038
GY IRK NG
Sbjct: 301 GYDKPVKGRKINWMKAGILESDRVLTVSPYYAEELVSGIEKGVELDNIIRKTGITGIVNG 360
Query: 1039 MDVQEWDPSTDKHIDIKYDATTVTDXXXXXXXXXXXXVGLPVDRNVPVIGFIGRLEEQKG 1218
DVQEW+P+TDK+I +KYDATTV D VGLPVDRN+PVIGFIGRLEEQKG
Sbjct: 361 TDVQEWNPTTDKYISVKYDATTVMDAKPLLKEALQSEVGLPVDRNIPVIGFIGRLEEQKG 420
Query: 1219 SDILAAAIPQLVDEDVQIIVLGTGKEIMEKQIEQLAVLYPGKAIGVAKFNVPLAHSIIAG 1398
SDILAA+IP+ + E+VQIIVLGTGK+ EKQ+EQL + YP KA GVAKFNVPLAH IIAG
Sbjct: 421 SDILAASIPKFIGENVQIIVLGTGKKAFEKQLEQLEIKYPDKARGVAKFNVPLAHMIIAG 480
Query: 1399 ADFMLIPSRFEPCGLIQLHAMRYGTPCIVASTG---------------XXXXXXXXXXXX 1533
ADF+LIPSRFEPCGLIQL M YGT +V+STG
Sbjct: 481 ADFLLIPSRFEPCGLIQLQTMPYGTIPLVSSTGGLVDTVKEGYTGFHMGAFNVDCDAVDP 540
Query: 1534 XXXXXXXXXXXXXXXXXXXXXXXXMIQNCMAQDFSWKGPAKVWEETLLSLXXXXXXXXXX 1713
MI+NCMAQ+FSWKGPAK WE LLSL
Sbjct: 541 ADVNAVATTVKKALKTYGTSAMIQMIKNCMAQNFSWKGPAKKWESILLSLEVAGSEPGID 600
Query: 1714 XXXXAPLALENVATP 1758
APLA ENVATP
Sbjct: 601 GEEIAPLAKENVATP 615
>gb|ACH72975.1| granule-bound starch synthase [Nelumbo nucifera]
Length = 615
Score = 593 bits (1528), Expect = e-167
Identities = 327/615 (53%), Positives = 374/615 (60%), Gaps = 33/615 (5%)
Frame = +1
Query: 13 MASVNASHYVSRTLQGRCGGTS--EVKTTVTQAAFKNQTMTHDGLRSLNKVDLLCVRNKS 186
MA+V AS +VS + GG S + KT + Q +NQTMTH GLRS+N VD L +R +
Sbjct: 1 MATVTASKFVSTSSLVSYGGMSGSQPKTALAQIGLRNQTMTHHGLRSVNNVDKLNLRANA 60
Query: 187 EGITRKTKKNVYVAKTAKRSGEIVCSGGMNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 366
+ T + K + AK I C GMN+
Sbjct: 61 KTTTGRAKGKECKTRNAKERSVIRCGSGMNLVFVGAEVGPWSKTGGLGDVLGGLPPAMAA 120
Query: 367 XXXX-----PRHDQYKDAWDTNVTIQVKVGDTTETVRFFHSYKRGVDRVFVDHPMFLEKV 531
PR+DQYKDAWDT+V +++KVGD ETVRFFH YKRGVDRVFVDHPMFLEKV
Sbjct: 121 NGHRVMTVAPRYDQYKDAWDTSVLVEIKVGDRIETVRFFHCYKRGVDRVFVDHPMFLEKV 180
Query: 532 WGKSESKIYGPTAGDDYEDNQLRFSLLCQAALEAPRVLNLNSSKSFSGPYGEDVVFIAND 711
WGK+ SKIYGP +G+DY DNQLRFSLLCQAALEAPRVLNLNSSK FSGPYGEDVVFI ND
Sbjct: 181 WGKTGSKIYGPMSGEDYSDNQLRFSLLCQAALEAPRVLNLNSSKPFSGPYGEDVVFICND 240
Query: 712 WHTAILPCYLKSMYQSQGIYKSAKVAFCIHNISYQGRFPFSDFSLLNLPDSFRSSFDFMD 891
WHTA+LPCYLK+MY+S+GIY++AKVAFCIHNI+YQGRF FSDFSLLNLPD F+SSFDF+D
Sbjct: 241 WHTALLPCYLKTMYKSRGIYRNAKVAFCIHNIAYQGRFSFSDFSLLNLPDEFKSSFDFID 300
Query: 892 GY-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRKXXXXXXXNG 1038
GY IRK NG
Sbjct: 301 GYDKPVKGRKINWMKAGILESDRVLTVSPYYAEELASGIEKGVELDNIIRKTGITGIVNG 360
Query: 1039 MDVQEWDPSTDKHIDIKYDATTVTDXXXXXXXXXXXXVGLPVDRNVPVIGFIGRLEEQKG 1218
DVQEW+P+TDK+I +KYDATTV D VGLPVDRN+PVIGFIGRLEEQKG
Sbjct: 361 TDVQEWNPTTDKYISVKYDATTVMDAKPLLKEALQSEVGLPVDRNIPVIGFIGRLEEQKG 420
Query: 1219 SDILAAAIPQLVDEDVQIIVLGTGKEIMEKQIEQLAVLYPGKAIGVAKFNVPLAHSIIAG 1398
SDILAA+IP+ + E+VQIIVLGTGK+ EKQ+EQL + YP KA GVAKFNVPLAH IIAG
Sbjct: 421 SDILAASIPKFIGENVQIIVLGTGKKAFEKQLEQLEIKYPDKARGVAKFNVPLAHMIIAG 480
Query: 1399 ADFMLIPSRFEPCGLIQLHAMRYGTPCIVASTG---------------XXXXXXXXXXXX 1533
ADF+LIPSRFEPCGLIQL M YGT +V+STG
Sbjct: 481 ADFLLIPSRFEPCGLIQLQTMPYGTIPLVSSTGGLVDTVKEGYTGFHMGAFNVDCDAVDP 540
Query: 1534 XXXXXXXXXXXXXXXXXXXXXXXXMIQNCMAQDFSWKGPAKVWEETLLSLXXXXXXXXXX 1713
MI+NCMAQ+FSWKGPAK WE LLSL
Sbjct: 541 ADVNAVATTVKKALKTYGTSAMIQMIKNCMAQNFSWKGPAKKWESILLSLEVAGSEPGID 600
Query: 1714 XXXXAPLALENVATP 1758
APLA ENVATP
Sbjct: 601 GEEIAPLAKENVATP 615
>gb|ACB97678.1| granule bound starch synthase Ib precursor [Malus x domestica]
gi|357528262|gb|AET80370.1| granule-bound starch synthase
GBSS2 [Malus x domestica]
Length = 615
Score = 583 bits (1504), Expect = e-164
Identities = 323/616 (52%), Positives = 373/616 (60%), Gaps = 34/616 (5%)
Frame = +1
Query: 13 MASVNASHYVSRTLQ---GRCGGTSEVKTTVTQAAFKNQTMTHDGLRSLNKVDLLCVRNK 183
MA++ AS + S + G S+ KT + +F QT+TH+GLR+LN VD L VR
Sbjct: 1 MATITASSFASTSSHVSYGAVSSGSDPKTGFKKMSFGKQTLTHNGLRALNSVDELRVRIM 60
Query: 184 SEGITRKTKKNVYVAKTAKRSGEIVCSGGMNVXXXXXXXXXXXXXXXXXXXXXXXXXXXX 363
+ + R+T+ V T K SG IVC GMN+
Sbjct: 61 ANSVARQTRGKT-VNSTRKTSGVIVCGSGMNLVFLGTEVGPWSKTGGLGDVLGGLPPAMA 119
Query: 364 XXXXX-----PRHDQYKDAWDTNVTIQVKVGDTTETVRFFHSYKRGVDRVFVDHPMFLEK 528
PR+DQYKDAWDT VT+++KVGD TETVRFFH YKRGVDRVFVDHP+FLEK
Sbjct: 120 ANGHRVMTISPRYDQYKDAWDTEVTVELKVGDKTETVRFFHCYKRGVDRVFVDHPLFLEK 179
Query: 529 VWGKSESKIYGPTAGDDYEDNQLRFSLLCQAALEAPRVLNLNSSKSFSGPYGEDVVFIAN 708
VWGK+ SKIYGP AG D++DNQLRFSLLCQAAL APRVLNLNSSK FSGPYGE+VVFIAN
Sbjct: 180 VWGKTASKIYGPVAGVDFKDNQLRFSLLCQAALVAPRVLNLNSSKYFSGPYGEEVVFIAN 239
Query: 709 DWHTAILPCYLKSMYQSQGIYKSAKVAFCIHNISYQGRFPFSDFSLLNLPDSFRSSFDFM 888
DWHTA+LPCYLK++Y+ +GIYK+AKVAFCIHNI+YQGRF F+DF+LLNLP+ F+SSFDF+
Sbjct: 240 DWHTALLPCYLKAIYKPKGIYKTAKVAFCIHNIAYQGRFAFADFALLNLPNEFKSSFDFI 299
Query: 889 DGY-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRKXXXXXXXN 1035
DGY +RK N
Sbjct: 300 DGYNKPVKGRKINWMKAGILESDKVLTVSPYYAEELVSSVEKGVELDNILRKSRIQGIVN 359
Query: 1036 GMDVQEWDPSTDKHIDIKYDATTVTDXXXXXXXXXXXXVGLPVDRNVPVIGFIGRLEEQK 1215
GMDVQEW+P TDK+ +KYDA+TV D VGLPVDR++PVIGFIGRLEEQK
Sbjct: 360 GMDVQEWNPVTDKYTTVKYDASTVADAKPLLKEALQAEVGLPVDRDIPVIGFIGRLEEQK 419
Query: 1216 GSDILAAAIPQLVDEDVQIIVLGTGKEIMEKQIEQLAVLYPGKAIGVAKFNVPLAHSIIA 1395
GSDIL AIP + E+VQIIVLGTGK+ MEKQ+EQL YP KA G+AKFNVPLAH I A
Sbjct: 420 GSDILIEAIPHFIKENVQIIVLGTGKKPMEKQLEQLETEYPDKARGIAKFNVPLAHMITA 479
Query: 1396 GADFMLIPSRFEPCGLIQLHAMRYGTPCIVASTG---------------XXXXXXXXXXX 1530
GADFML+PSRFEPCGLIQLHAMRYGT IVASTG
Sbjct: 480 GADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFHMGAFNVECEVVD 539
Query: 1531 XXXXXXXXXXXXXXXXXXXXXXXXXMIQNCMAQDFSWKGPAKVWEETLLSLXXXXXXXXX 1710
+I NCMAQD SWKGPAK WEE LLSL
Sbjct: 540 PVDVQAIATTVTRALGSYGTPAFTEIISNCMAQDLSWKGPAKKWEEVLLSLGVANSELGI 599
Query: 1711 XXXXXAPLALENVATP 1758
APLA ENVATP
Sbjct: 600 EGEEIAPLAKENVATP 615
>ref|XP_002317054.1| predicted protein [Populus trichocarpa] gi|222860119|gb|EEE97666.1|
predicted protein [Populus trichocarpa]
Length = 585
Score = 582 bits (1499), Expect = e-163
Identities = 327/599 (54%), Positives = 372/599 (62%), Gaps = 17/599 (2%)
Frame = +1
Query: 13 MASVNASHYVSRTLQGRCGGTSEVKTTVTQAAFKNQTMTHDGLRSLNKVDLLCVRNKSEG 192
MA+V ASH VS + G SE K ++ Q ++Q+MTH GLRSLN D L +R ++
Sbjct: 1 MATVTASHVVSNSSNVSSHG-SETKASLGQIGLRSQSMTHSGLRSLNMTDKLQMR--TQA 57
Query: 193 ITRKTKKNVYVAKTAKRSGEIVC-SGGMNVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 369
RK+ K Y A SG+IVC GGM V
Sbjct: 58 FARKSVKKAY-ATWNHTSGKIVCLQGGMTVVFVGIEVAPWSKTGGLGDVIGGLPPEMAAR 116
Query: 370 XXX-----PRHDQYKDAWDTNVTIQVKVGDTTETVRFFHSYKRGVDRVFVDHPMFLEKVW 534
PR DQY+DAWDT ++ Q+KVGD ETVR+FH YKRGVDRVFVDHPMFLEKVW
Sbjct: 117 GHRVMTISPRFDQYRDAWDTCLSAQIKVGDRIETVRYFHCYKRGVDRVFVDHPMFLEKVW 176
Query: 535 GKSESKIYGPTAGDDYEDNQLRFSLLCQAALEAPRVLNLNSSKSFSGPYGEDVVFIANDW 714
GK+ SKIYGPTAG+DY+DNQLRFSL C AALEAPRVL+LNSSK FSGPYGEDVVF+ANDW
Sbjct: 177 GKTGSKIYGPTAGEDYQDNQLRFSLFCLAALEAPRVLSLNSSKHFSGPYGEDVVFVANDW 236
Query: 715 HTAILPCYLKSMYQSQGIYKSAKVAFCIHNISYQGRFPFSDFSLLNLPDSFRSSFDFMDG 894
HTA+LPCYLKSMYQS+G++ +AKVAFCIHNI+YQGRF FSDFSLLNLPD F+SSFDFMD
Sbjct: 237 HTALLPCYLKSMYQSRGLFMNAKVAFCIHNIAYQGRFAFSDFSLLNLPDRFKSSFDFMDL 296
Query: 895 Y-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRKXXXXXXXNGM 1041
Y IRK NGM
Sbjct: 297 YDKPVKGRKLNWLKAGILEAQMVFTVSPYYAQELVSGIEKGMELDHCIRKTGITGIINGM 356
Query: 1042 DVQEWDPSTDKHIDIKYDATTVTDXXXXXXXXXXXXVGLPVDRNVPVIGFIGRLEEQKGS 1221
DVQEW+P+TDK+ IKYD TTV+ VGLPVD ++PVIGFIGRLEEQKGS
Sbjct: 357 DVQEWNPATDKYTSIKYDITTVSYAKPLLKEALQAEVGLPVDGDIPVIGFIGRLEEQKGS 416
Query: 1222 DILAAAIPQLVDEDVQIIVLGTGKEIMEKQIEQLAVLYPGKAIGVAKFNVPLAHSIIAGA 1401
DILA+AIP LV +VQIIVLGTGK+ MEKQI +L YP K GVA FNVPLAH IIAGA
Sbjct: 417 DILASAIPMLVKYNVQIIVLGTGKKYMEKQIAELEKKYPDKVRGVALFNVPLAHMIIAGA 476
Query: 1402 DFMLIPSRFEPCGLIQLHAMRYGTPCIVASTGXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1581
DFM+IPSRFEPCGLIQLHAMRYGT CIVASTG
Sbjct: 477 DFMIIPSRFEPCGLIQLHAMRYGTVCIVASTG----------GLVDTVKEGYTGFHMGAF 526
Query: 1582 XXXXXXXXMIQNCMAQDFSWKGPAKVWEETLLSLXXXXXXXXXXXXXXAPLALENVATP 1758
MI+NCM+QD SWKGPA++WE+ LLSL APLA ENVATP
Sbjct: 527 SVEVKAKEMIKNCMSQDLSWKGPARLWEKMLLSLNVAGSEAGSEGDEIAPLAKENVATP 585
>gb|AFA36448.1| GBSSII-2 [Prunus persica]
Length = 618
Score = 579 bits (1492), Expect = e-162
Identities = 325/618 (52%), Positives = 372/618 (60%), Gaps = 36/618 (5%)
Frame = +1
Query: 13 MASVNASHYVSRTLQ---GRCGGTSEVKTTVTQAAFKNQTMTHDGLRSLNKVDLLCVRNK 183
MA+V AS + S + G SE KT + F Q MTH+GLR+LN VD L V+
Sbjct: 1 MATVTASSFASTSSNVSYGAVSSVSEPKTGYKKMGFGKQAMTHNGLRALNTVDELRVKIM 60
Query: 184 SEGITRKTK-KNVYVAKTAKR-SGEIVCSGGMNVXXXXXXXXXXXXXXXXXXXXXXXXXX 357
I R+ + K+ +T R +G IVC GMN+
Sbjct: 61 GNSIARQARSKSFNSTRTGSRPAGTIVCGSGMNLVFLGTEVGPWSKTGGLGDVLGGLPPA 120
Query: 358 XXXXXXX-----PRHDQYKDAWDTNVTIQVKVGDTTETVRFFHSYKRGVDRVFVDHPMFL 522
PR+DQYKDAWDT VTI+VKVG+ TE VRFFH YKRGVDRVFVDHP+FL
Sbjct: 121 MAANGHRVMTVSPRYDQYKDAWDTEVTIEVKVGEKTEKVRFFHCYKRGVDRVFVDHPLFL 180
Query: 523 EKVWGKSESKIYGPTAGDDYEDNQLRFSLLCQAALEAPRVLNLNSSKSFSGPYGEDVVFI 702
EKVWGK+ SKIYGP AG+D++DNQLRFSLLC+AALEAPRVLNLNSSK FSGPYGE+VVFI
Sbjct: 181 EKVWGKTASKIYGPIAGEDFKDNQLRFSLLCRAALEAPRVLNLNSSKYFSGPYGEEVVFI 240
Query: 703 ANDWHTAILPCYLKSMYQSQGIYKSAKVAFCIHNISYQGRFPFSDFSLLNLPDSFRSSFD 882
ANDWHTA+LPCYLK++YQ +GIY+SAKVAFCIHNI+YQGRF +DF+LLNLPD F+SSFD
Sbjct: 241 ANDWHTALLPCYLKAIYQPKGIYRSAKVAFCIHNIAYQGRFASADFALLNLPDEFKSSFD 300
Query: 883 FMDGY-----------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRKXXXXXX 1029
F+DGY IRK
Sbjct: 301 FIDGYDKPVKGRKINWMKAGILESDKVLTVSPYYAEELVSTVEKGVELDNVIRKAGILGI 360
Query: 1030 XNGMDVQEWDPSTDKHIDIKYDATTVTDXXXXXXXXXXXXVGLPVDRNVPVIGFIGRLEE 1209
NGMDVQEW+P TDK+ KYDA+TVTD VGLPVDR++PVIGFIGRLEE
Sbjct: 361 VNGMDVQEWNPLTDKYTAAKYDASTVTDAKPLLKEALQAEVGLPVDRDIPVIGFIGRLEE 420
Query: 1210 QKGSDILAAAIPQLVDEDVQIIVLGTGKEIMEKQIEQLAVLYPGKAIGVAKFNVPLAHSI 1389
QKGSDIL AIP + E+VQIIVLGTGK+ MEKQ+EQL + YP KA GVAKFNVPLAH I
Sbjct: 421 QKGSDILIEAIPHFIKENVQIIVLGTGKKPMEKQLEQLEIKYPDKARGVAKFNVPLAHMI 480
Query: 1390 IAGADFMLIPSRFEPCGLIQLHAMRYGTPCIVASTG---------------XXXXXXXXX 1524
AGADFML+PSRFEPCGLIQLHAMRYGT IVASTG
Sbjct: 481 TAGADFMLVPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFQMGGFNVECEV 540
Query: 1525 XXXXXXXXXXXXXXXXXXXXXXXXXXXMIQNCMAQDFSWKGPAKVWEETLLSLXXXXXXX 1704
+I NCMAQD SWKGPAK WEE LL+L
Sbjct: 541 VDPADVQAIATTVTRALGTYGTPAFTEIIGNCMAQDLSWKGPAKKWEEVLLNLGVVDSEP 600
Query: 1705 XXXXXXXAPLALENVATP 1758
APLA EN+ATP
Sbjct: 601 GIDGEEIAPLAKENIATP 618