BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00002003
         (1629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519520.1| isocitrate dehydrogenase, putative [Ricinus ...   540   e-153
ref|XP_004143261.1| PREDICTED: isocitrate dehydrogenase [NAD] ca...   542   e-152
ref|XP_002281826.1| PREDICTED: isocitrate dehydrogenase [NAD] ca...   537   e-152
emb|CBI32749.3| unnamed protein product [Vitis vinifera]              536   e-152
ref|XP_002322885.1| predicted protein [Populus trichocarpa] gi|2...   534   e-150

>ref|XP_002519520.1| isocitrate dehydrogenase, putative [Ricinus communis]
            gi|223541383|gb|EEF42934.1| isocitrate dehydrogenase,
            putative [Ricinus communis]
          Length = 364

 Score =  540 bits (1391), Expect(2) = e-153
 Identities = 266/319 (83%), Positives = 290/319 (90%)
 Frame = -1

Query: 1578 MASQILRRVLRNQSTGNSSSSTLILRNYLCSDASPMSPIQATMFPGDGIGPEIAESVKKV 1399
            MASQ+LRR   ++S+    ++      +     S  +PI AT+FPGDGIGPEIAESVK+V
Sbjct: 1    MASQLLRRAFGSRSSSQIGAAAAARALF-----STSTPITATLFPGDGIGPEIAESVKQV 55

Query: 1398 LNTAQVPIEWEEHFVGDKVDPRTQSFLTWESLESVRSNRVGLKGPMATPIGKGHRSLNLT 1219
               A+VPIEWEEH+VGD++DPRTQSFLTWESLESVR NRVGLKGPMATPIGKGHRSLNLT
Sbjct: 56   FKEAEVPIEWEEHYVGDQIDPRTQSFLTWESLESVRRNRVGLKGPMATPIGKGHRSLNLT 115

Query: 1218 LRKELGLYANVRPCYSLTGFKTRYDDVNLVTIRENTEGEYSGLEHQVVRGVVESLKIITR 1039
            LRKEL LYANVRPCYSL G+KTRYDDVNL+TIRENTEGEYSGLEHQVVRGVVESLKIITR
Sbjct: 116  LRKELNLYANVRPCYSLPGYKTRYDDVNLITIRENTEGEYSGLEHQVVRGVVESLKIITR 175

Query: 1038 TASLRVAEYAFHYARTEGREKVSAIHKANIMRKTDGLFLKCCREVAEKYPDIKYEEVIID 859
             ASLRVAEYAFHYA+T GRE+VSAIHKANIM+KTDGLFLKCCREVAEKYP+IKYEEV+ID
Sbjct: 176  QASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIKYEEVVID 235

Query: 858  NCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEGGIALAEAVHGSA 679
            NCCMMLVKNPALFDVLVMPNLYGDIISDLCAGL+GGLGLTPSCNIGEGGIALAEAVHGSA
Sbjct: 236  NCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSA 295

Query: 678  PDIAGKNLANPTALLLSAV 622
            PDIAGKNLANPTAL+LS+V
Sbjct: 296  PDIAGKNLANPTALMLSSV 314



 Score = 29.6 bits (65), Expect(2) = e-153
 Identities = 12/14 (85%), Positives = 14/14 (100%)
 Frame = -3

Query: 505 STTTDFTKAICDNL 464
           S+TTDFTKAICD+L
Sbjct: 351 SSTTDFTKAICDHL 364


>ref|XP_004143261.1| PREDICTED: isocitrate dehydrogenase [NAD] catalytic subunit 5,
            mitochondrial-like [Cucumis sativus]
            gi|449524456|ref|XP_004169239.1| PREDICTED: isocitrate
            dehydrogenase [NAD] catalytic subunit 5,
            mitochondrial-like [Cucumis sativus]
          Length = 372

 Score =  542 bits (1397), Expect(2) = e-152
 Identities = 271/326 (83%), Positives = 296/326 (90%), Gaps = 7/326 (2%)
 Frame = -1

Query: 1578 MASQILRRVLRNQS-------TGNSSSSTLILRNYLCSDASPMSPIQATMFPGDGIGPEI 1420
            MASQ+L+R LR+QS       +  +SSS    R +    +S  +PI+AT+FPGDGIGPEI
Sbjct: 1    MASQLLKRALRSQSGQIFSLSSSLNSSSPFPFRAF----SSAATPIRATLFPGDGIGPEI 56

Query: 1419 AESVKKVLNTAQVPIEWEEHFVGDKVDPRTQSFLTWESLESVRSNRVGLKGPMATPIGKG 1240
            AESVK+V  TA VPIEWEEH+VGD++DPRTQSFLTWESLESVR N VGLKGPMATPIGKG
Sbjct: 57   AESVKQVFRTADVPIEWEEHYVGDEIDPRTQSFLTWESLESVRRNGVGLKGPMATPIGKG 116

Query: 1239 HRSLNLTLRKELGLYANVRPCYSLTGFKTRYDDVNLVTIRENTEGEYSGLEHQVVRGVVE 1060
            HRSLNLTLRKEL LYANVRPCYSL G+KTRYD+VNL+TIRENTEGEYSGLEHQVVRGVVE
Sbjct: 117  HRSLNLTLRKELNLYANVRPCYSLPGYKTRYDNVNLITIRENTEGEYSGLEHQVVRGVVE 176

Query: 1059 SLKIITRTASLRVAEYAFHYARTEGREKVSAIHKANIMRKTDGLFLKCCREVAEKYPDIK 880
            SLKIITR ASLRVAEYAFHYA+T GRE+VSAIHKANIM+KTDGLFLKCCREVA+KYP+IK
Sbjct: 177  SLKIITRQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAKKYPEIK 236

Query: 879  YEEVIIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEGGIALA 700
            YEEV+IDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGL+GGLGLTPSCNIGEGGIALA
Sbjct: 237  YEEVVIDNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALA 296

Query: 699  EAVHGSAPDIAGKNLANPTALLLSAV 622
            EAVHGSAPDIAGKN+ANPTALLLSAV
Sbjct: 297  EAVHGSAPDIAGKNMANPTALLLSAV 322



 Score = 26.2 bits (56), Expect(2) = e-152
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = -3

Query: 505 STTTDFTKAICDNL 464
           S+TT+FT AICD+L
Sbjct: 359 SSTTEFTNAICDHL 372


>ref|XP_002281826.1| PREDICTED: isocitrate dehydrogenase [NAD] catalytic subunit 5,
            mitochondrial-like [Vitis vinifera]
          Length = 367

 Score =  537 bits (1384), Expect(2) = e-152
 Identities = 266/320 (83%), Positives = 295/320 (92%)
 Frame = -1

Query: 1581 LMASQILRRVLRNQSTGNSSSSTLILRNYLCSDASPMSPIQATMFPGDGIGPEIAESVKK 1402
            +M +QILRR+L + ++  + SS    R++  SD+S  + I+AT+FPGDGIGPEIAE+VK+
Sbjct: 1    MMGTQILRRLLGSPNSSRAFSS--FNRSFSSSDSSS-NLIRATLFPGDGIGPEIAEAVKQ 57

Query: 1401 VLNTAQVPIEWEEHFVGDKVDPRTQSFLTWESLESVRSNRVGLKGPMATPIGKGHRSLNL 1222
            V   A VPIEWEEH+VGD++DPRTQSFLTWESLESVR N VGLKGPMATPIGKGHRSLNL
Sbjct: 58   VFRAADVPIEWEEHYVGDQIDPRTQSFLTWESLESVRQNGVGLKGPMATPIGKGHRSLNL 117

Query: 1221 TLRKELGLYANVRPCYSLTGFKTRYDDVNLVTIRENTEGEYSGLEHQVVRGVVESLKIIT 1042
            TLRKEL LYANVRPCYSL G+KTRYDDV+L+TIRENTEGEYSGLEHQVVRGVVESLKIIT
Sbjct: 118  TLRKELNLYANVRPCYSLPGYKTRYDDVDLITIRENTEGEYSGLEHQVVRGVVESLKIIT 177

Query: 1041 RTASLRVAEYAFHYARTEGREKVSAIHKANIMRKTDGLFLKCCREVAEKYPDIKYEEVII 862
            R ASLRVAEYAFHYA+T GRE+VSAIHKANIM+KTDGLFLKCCREVAEKYP+IKYEEV+I
Sbjct: 178  RQASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIKYEEVVI 237

Query: 861  DNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEGGIALAEAVHGS 682
            DNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGL+GGLGLTPSCNIGEGGIALAEAVHGS
Sbjct: 238  DNCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGS 297

Query: 681  APDIAGKNLANPTALLLSAV 622
            APDIAGKN+ANPTAL+LSAV
Sbjct: 298  APDIAGKNMANPTALMLSAV 317



 Score = 31.2 bits (69), Expect(2) = e-152
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -3

Query: 505 STTTDFTKAICDNL 464
           STTTDFTKAICD+L
Sbjct: 354 STTTDFTKAICDHL 367


>emb|CBI32749.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score =  536 bits (1382), Expect(2) = e-152
 Identities = 266/319 (83%), Positives = 294/319 (92%)
 Frame = -1

Query: 1578 MASQILRRVLRNQSTGNSSSSTLILRNYLCSDASPMSPIQATMFPGDGIGPEIAESVKKV 1399
            M +QILRR+L + ++  + SS    R++  SD+S  + I+AT+FPGDGIGPEIAE+VK+V
Sbjct: 1    MGTQILRRLLGSPNSSRAFSS--FNRSFSSSDSSS-NLIRATLFPGDGIGPEIAEAVKQV 57

Query: 1398 LNTAQVPIEWEEHFVGDKVDPRTQSFLTWESLESVRSNRVGLKGPMATPIGKGHRSLNLT 1219
               A VPIEWEEH+VGD++DPRTQSFLTWESLESVR N VGLKGPMATPIGKGHRSLNLT
Sbjct: 58   FRAADVPIEWEEHYVGDQIDPRTQSFLTWESLESVRQNGVGLKGPMATPIGKGHRSLNLT 117

Query: 1218 LRKELGLYANVRPCYSLTGFKTRYDDVNLVTIRENTEGEYSGLEHQVVRGVVESLKIITR 1039
            LRKEL LYANVRPCYSL G+KTRYDDV+L+TIRENTEGEYSGLEHQVVRGVVESLKIITR
Sbjct: 118  LRKELNLYANVRPCYSLPGYKTRYDDVDLITIRENTEGEYSGLEHQVVRGVVESLKIITR 177

Query: 1038 TASLRVAEYAFHYARTEGREKVSAIHKANIMRKTDGLFLKCCREVAEKYPDIKYEEVIID 859
             ASLRVAEYAFHYA+T GRE+VSAIHKANIM+KTDGLFLKCCREVAEKYP+IKYEEV+ID
Sbjct: 178  QASLRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEIKYEEVVID 237

Query: 858  NCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEGGIALAEAVHGSA 679
            NCCMMLVKNPALFDVLVMPNLYGDIISDLCAGL+GGLGLTPSCNIGEGGIALAEAVHGSA
Sbjct: 238  NCCMMLVKNPALFDVLVMPNLYGDIISDLCAGLIGGLGLTPSCNIGEGGIALAEAVHGSA 297

Query: 678  PDIAGKNLANPTALLLSAV 622
            PDIAGKN+ANPTAL+LSAV
Sbjct: 298  PDIAGKNMANPTALMLSAV 316



 Score = 31.2 bits (69), Expect(2) = e-152
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -3

Query: 505 STTTDFTKAICDNL 464
           STTTDFTKAICD+L
Sbjct: 353 STTTDFTKAICDHL 366


>ref|XP_002322885.1| predicted protein [Populus trichocarpa] gi|222867515|gb|EEF04646.1|
            predicted protein [Populus trichocarpa]
          Length = 363

 Score =  534 bits (1375), Expect(2) = e-150
 Identities = 267/316 (84%), Positives = 287/316 (90%)
 Frame = -1

Query: 1569 QILRRVLRNQSTGNSSSSTLILRNYLCSDASPMSPIQATMFPGDGIGPEIAESVKKVLNT 1390
            Q+LRRVL       +S ST I        ++P +PI AT+FPGDGIGPEIAESVK+V   
Sbjct: 5    QVLRRVL------GASGSTQISSTARAFSSAP-APIIATLFPGDGIGPEIAESVKQVFQA 57

Query: 1389 AQVPIEWEEHFVGDKVDPRTQSFLTWESLESVRSNRVGLKGPMATPIGKGHRSLNLTLRK 1210
            A+VPIEWEEH+VGD++DPRTQSFLTWESLESVR NRVGLKGPMATP+GKGHRSLNLTLRK
Sbjct: 58   AEVPIEWEEHYVGDQIDPRTQSFLTWESLESVRRNRVGLKGPMATPVGKGHRSLNLTLRK 117

Query: 1209 ELGLYANVRPCYSLTGFKTRYDDVNLVTIRENTEGEYSGLEHQVVRGVVESLKIITRTAS 1030
            EL LYANVRPCYSL G+KTRYD+VNL+TIRENTEGEYSGLEHQVVRGVVESLKIITR AS
Sbjct: 118  ELNLYANVRPCYSLPGYKTRYDNVNLITIRENTEGEYSGLEHQVVRGVVESLKIITRQAS 177

Query: 1029 LRVAEYAFHYARTEGREKVSAIHKANIMRKTDGLFLKCCREVAEKYPDIKYEEVIIDNCC 850
            LRVAEYAFHYA+T GRE+VSAIHKANIM+KTDGLFLKCCREVAEKYP+I YEEV+IDNCC
Sbjct: 178  LRVAEYAFHYAKTHGRERVSAIHKANIMQKTDGLFLKCCREVAEKYPEITYEEVVIDNCC 237

Query: 849  MMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEGGIALAEAVHGSAPDI 670
            MMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGE GIALAEAVHGSAPDI
Sbjct: 238  MMLVKNPALFDVLVMPNLYGDIISDLCAGLVGGLGLTPSCNIGEAGIALAEAVHGSAPDI 297

Query: 669  AGKNLANPTALLLSAV 622
            AGKNLANPTALLLSAV
Sbjct: 298  AGKNLANPTALLLSAV 313



 Score = 26.9 bits (58), Expect(2) = e-150
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = -3

Query: 505 STTTDFTKAICDNL 464
           S+TTDFTKAIC +L
Sbjct: 350 SSTTDFTKAICGHL 363