BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001997
         (1537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBA12000.1| putative auxin response factor 3 [Illicium parvi...   388   e-105
ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vit...   293   6e-77
ref|XP_002522498.1| Auxin response factor, putative [Ricinus com...   289   2e-75
emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]   282   1e-73
emb|CBI30623.3| unnamed protein product [Vitis vinifera]              279   1e-72

>emb|CBA12000.1| putative auxin response factor 3 [Illicium parviflorum]
          Length = 837

 Score =  388 bits (996), Expect = e-105
 Identities = 237/516 (45%), Positives = 293/516 (56%), Gaps = 11/516 (2%)
 Frame = +3

Query: 3    RWPGSKWRCLVVRWDDDIVRNRQNRVSPWEIEPSGSVLASNNYMAPGSKRTRTGLPPAKS 182
            RWPGSKWRCL+VRWD++     Q++VSPWEIEPSGS+   ++ + PGSK+ R  LP  K+
Sbjct: 334  RWPGSKWRCLMVRWDEEAGHYCQDKVSPWEIEPSGSLSGFSSPLTPGSKKPRISLPSIKA 393

Query: 183  SFPVCNQTGLSDFGESLRFQKVLQGQEFLGFTSPHTGTIQ--NHHESEVRRCIPGWNDSG 356
             FP  + TG+SDFGESL FQKVLQGQE LGF +P+ G+I   NHH SE+RRC PG N SG
Sbjct: 394  DFPFRDGTGISDFGESLGFQKVLQGQEILGFKAPY-GSIDGLNHHLSEIRRCYPGANSSG 452

Query: 357  MARMGSGILIQPGSSYT-SYKGVGFGESVRFHKVLQGQEIFP-KQPQERAPVDKWVLDNG 530
            +A +GSGI    G ++  S K VGFGES +F KVLQGQEIFP KQP  R  VD  V +N 
Sbjct: 453  IAGIGSGIGTPRGGTFEISDKRVGFGESDQFQKVLQGQEIFPLKQPYGRPQVDIRVHENS 512

Query: 531  GFGISDRAHSSTVENRWSSLMQGVNAHVQHXXXXXXXXXXXXVLRFQQANAQVFYPNSMY 710
            GFG+ +  H S   +RW   +QG    VQ             VLRFQ+    V YP   Y
Sbjct: 513  GFGLFEGFHMSG--SRWPLPVQGYATQVQSFKQSPEVSSPSSVLRFQRGTNNVSYPYFAY 570

Query: 711  GTYNQDG--ENRNAFGLCNSSKTLGGKPTSSSVYQPQDNMDVLESLHTLKSTEDHNRIGS 884
            G  +     E     G  + SK   G   SS       ++D  E    +   +  NR G+
Sbjct: 571  GINHLPNVEEQGRLSGFFDRSKLSSGPQISSL-----SSIDCREDRRCMYPLDQTNRPGN 625

Query: 885  LLPPASPMTRKNPRDSQNLPTGRSDCRLFGFSLAGEADVGNEVDTTTPVTSPSLTDNLNQ 1064
               P   +++ + +D Q+     + CRLFGF L  EA V N VD T PV S S  D   +
Sbjct: 626  SFDPTL-ISKSDFKDRQSGEALGTSCRLFGFPLTKEAPVANTVDPT-PVASQSAKDLDLK 683

Query: 1065 GTLPS-----DVEQFQFRPPVLIETVGRSCTKVXXXXXXXXXXXXXXXXXXXVHKQGSLI 1229
              LP+       +Q         +T GRSCTKV                    H+QG+L+
Sbjct: 684  TCLPTANSMIPGKQLHAEVQSSTKTAGRSCTKV--------------------HRQGNLV 723

Query: 1230 GRAIDLTKLEGYDDLISELERLFNMKGLLNDPNKGWQIAYXXXXXXXXXXXXXPWKEFCN 1409
            GRAIDL+KL+GYDDLI+ELERLFNM+GLLNDP KGWQ+ Y             PW+EFCN
Sbjct: 724  GRAIDLSKLDGYDDLITELERLFNMEGLLNDPGKGWQVVYTDDEDDMMLVGDDPWQEFCN 783

Query: 1410 IVSKIQIYTHDEEALMAVKVTDSDAHSCSEEVAGEI 1517
            IVSKI IYTHDE  LM    T  DAHSCSEE    +
Sbjct: 784  IVSKILIYTHDEVELMVPGGTSDDAHSCSEEAPATV 819


>ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
          Length = 740

 Score =  293 bits (751), Expect = 6e-77
 Identities = 185/395 (46%), Positives = 227/395 (57%), Gaps = 13/395 (3%)
 Frame = +3

Query: 3    RWPGSKWRCLVVRWDDDIVRNRQNRVSPWEIEPSGSVLASNNYMAPGSKRTRTGLPPAKS 182
            RWPGSKWRCL+VRWDD I  NR NRVSPWEIE SGS+  S +   PGSKRTR GLP  + 
Sbjct: 353  RWPGSKWRCLLVRWDD-IEANRHNRVSPWEIELSGSLSGSGSLTVPGSKRTRIGLPGTRP 411

Query: 183  SFPVCNQTGLSDFGESLRFQKVLQGQEFLGFTSPHTGT-IQNHHESEVRRCIPGWNDSGM 359
             F V N  G+SDFGES RFQKVLQGQE  GF +P+ G   Q+HH SE+ RC PG + SG+
Sbjct: 412  DFSVPNGMGVSDFGESSRFQKVLQGQEIFGFNTPYDGVDTQDHHPSEI-RCFPGSSCSGI 470

Query: 360  ARMGSGILIQPGSSYTSYKGVGFGESVRFHKVLQGQEIFPKQPQERAPVDKWVLDNGGFG 539
            A +G+G+    G+S  SYKG+GFGES RFHKVLQGQE FP  P  RA       +NG FG
Sbjct: 471  AAIGNGVRNPLGNSDISYKGIGFGESFRFHKVLQGQETFPSPPCGRALSANQAHENGSFG 530

Query: 540  ISDRAHSSTVENRWSSLMQGVNAHVQHXXXXXXXXXXXXVLRFQQANAQVFYPNSMYGTY 719
            I D     T  N W +L+QG NAH               VL FQQA+       SM+   
Sbjct: 531  IFDGVQVPTSRNGWPALVQGYNAHTHLSTPSVQVSSPSSVLMFQQASTAAPNIYSMHSAN 590

Query: 720  NQDGE----NRNAFGLCNSSKTLGGKPTSSSVYQP-----QDNMDVLESLHTLKSTEDHN 872
            NQ+ E    NR++F +    +  G K T S          Q  M+    L+      +HN
Sbjct: 591  NQEKEQEISNRSSFDI---PEVYGEKLTPSRCELSVRGGGQGGMNFFGLLN------EHN 641

Query: 873  RIGSLLPPASPMTRKNPRDSQNL-PTGRSDCRLFGFSLAGEADVGNEVDTTTPVTSPSLT 1049
            +   L  P   +T+   R SQ+L PT +S CRLFGFSL  E  +GN+VD  TPVTS    
Sbjct: 642  Q---LAVPHPLVTQSAFRGSQDLVPTCKSSCRLFGFSLTEERSIGNKVDNPTPVTS---- 694

Query: 1050 DNLNQGT--LPSDVEQFQFRPPVLIETVGRSCTKV 1148
             +L  GT  LP   +Q    PPV+ + +G +CTKV
Sbjct: 695  -SLIPGTSFLP---QQLHSEPPVMTKAIGSNCTKV 725


>ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
            gi|223538189|gb|EEF39798.1| Auxin response factor,
            putative [Ricinus communis]
          Length = 730

 Score =  289 bits (739), Expect = 2e-75
 Identities = 167/384 (43%), Positives = 221/384 (57%), Gaps = 2/384 (0%)
 Frame = +3

Query: 3    RWPGSKWRCLVVRWDDDIVRNRQNRVSPWEIEPSGSVLASNNYMAPGSKRTRTGLPPAKS 182
            RWPGSKWRCLVVRWDD +  NR +RVSPWEIEPSGSV + N++M PG KR+R+G P +K 
Sbjct: 356  RWPGSKWRCLVVRWDD-METNRHSRVSPWEIEPSGSVSSCNSFMTPGLKRSRSGFPSSKP 414

Query: 183  SFPVCNQTGLSDFGESLRFQKVLQGQEFLGFTSPHTGTIQNHHESEVRRCIPGWNDSGMA 362
             FPV +  G SDFGE  RFQKVLQGQE L F + + G  QN H S++RRC PG   S +A
Sbjct: 415  EFPVPDGIGASDFGEPSRFQKVLQGQEILNFNTLYDGVDQNRHPSDIRRCFPGSRSSMIA 474

Query: 363  RMGSGILIQPGSSYTSYKGVGFGESVRFHKVLQGQEIFPKQPQERAPVD-KWVLDNGGFG 539
               +G      +S  SYK +GF ES+RFHKVLQGQEI P  P  RAP       +NG FG
Sbjct: 475  TTRNGARDPVVNSDVSYKSIGFSESLRFHKVLQGQEIIPSSPFGRAPASTNEACENGCFG 534

Query: 540  ISDRAHSSTVENRWSSLMQGVNAHVQHXXXXXXXXXXXXVLRFQQANAQVFYPNSMYGTY 719
            ISD    ++  N WSS+MQG N  ++             VL FQQA+ QV  P+  YG  
Sbjct: 535  ISDGVQMTSSRNGWSSMMQGYNTRIR---PPAQVSSPCSVLMFQQASNQVSNPSPRYGFN 591

Query: 720  NQDGENRNAFGLCNSSKTLGGKPTSSSVYQPQDNMDVLESLHTLKSTEDHNRIGSLLPPA 899
            + + +  N     ++ +T G K  SSS  +     +    + +   + +H++ G L P  
Sbjct: 592  DLEEQGVNTQSWFHNPETCGEKRMSSSRSEHIFRRNNQWGMDSFSLSHEHSQHGLLQPLV 651

Query: 900  SPMTRKNPRDSQNLPTGRSDCRLFGFSLAGEADVGNEVDTTTPVTSPSLTDNLNQGT-LP 1076
            +    K  +D   + + +S CRLFGF L  +  V N+ D++ P+ S      LN G+ +P
Sbjct: 652  AQPPCKGGQDL--VSSCKSSCRLFGFQLTEDRHVANKDDSSIPMAS------LNAGSFMP 703

Query: 1077 SDVEQFQFRPPVLIETVGRSCTKV 1148
               EQF  +PP +   VG SCTKV
Sbjct: 704  HAGEQFHLKPPAITNAVGSSCTKV 727


>emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
          Length = 831

 Score =  282 bits (722), Expect = 1e-73
 Identities = 193/475 (40%), Positives = 246/475 (51%), Gaps = 39/475 (8%)
 Frame = +3

Query: 3    RWPGSKWRCLV------------------------------VRWDDDIVRNRQNRVSPWE 92
            RWPGSKWRCL+                              VRWDD I  NR NRVSPWE
Sbjct: 352  RWPGSKWRCLLLHHSHGSECVLLPCLPYYSDSATFFDLSLQVRWDD-IEANRHNRVSPWE 410

Query: 93   IEPSGSVLASNNYMAPGSKRTRTGLPPAKSSFPVCNQTGLSDFGESLRFQKVLQGQEFLG 272
            IE SGS+  S +   PGSKRTR GLP  +  F V N  G+SDFGES RFQKVLQGQE  G
Sbjct: 411  IELSGSLSGSGSLTVPGSKRTRIGLPGTRPDFSVPNGMGVSDFGESSRFQKVLQGQEIFG 470

Query: 273  FTSPHTGT-IQNHHESEVRRCIPGWNDSGMARMGSGILIQPGSSYTSYKGVGFGESVRFH 449
            F +P+ G   Q+HH SE+ RC PG + S +A +G+G+    G+S  SYKG+GFGES RFH
Sbjct: 471  FNTPYDGVDTQDHHPSEI-RCFPGSSCSRIAAIGNGVRNPLGNSDISYKGIGFGESFRFH 529

Query: 450  KVLQGQEIFPKQPQERAPVDKWVLDNGGFGISDRAHSSTVENRWSSLMQGVNAHVQHXXX 629
            KVLQGQE FP  P  RA       +NG FGI D     T  N W +L+QG NAH      
Sbjct: 530  KVLQGQETFPSPPCGRALSANQAHENGSFGIFDGVQVPTSRNGWPALVQGYNAHT----- 584

Query: 630  XXXXXXXXXVLRFQQANAQVFYPNSMYGTYNQDGENRNAFGLCNSSKTLGGKPTSSSVYQ 809
                            + QV  P+S+    ++   NR++F +    +  G K T S    
Sbjct: 585  -----------HLSTPSVQVSSPSSVLMRRSKXLSNRSSFDI---PEVYGEKLTPSRCEL 630

Query: 810  P-----QDNMDVLESLHTLKSTEDHNRIGSLLPPASPMTRKNPRDSQNL-PTGRSDCRLF 971
                  Q  M+    L+      +HN+   L  P   +T+   R SQ+L PT +S CRLF
Sbjct: 631  SVRGGGQGGMNFFGLLN------EHNQ---LAVPHPLVTQSAFRGSQDLVPTCKSSCRLF 681

Query: 972  GFSLAGEADVGNEVDTTTPVTSPSLTDNLNQGT--LPSDVEQFQFRPPVLIETVGRSCTK 1145
            GFSL  E  +GN+VD  TPVTS     +L  GT  LP   +Q    PPV+ + +G +CTK
Sbjct: 682  GFSLTEERSIGNKVDNPTPVTS-----SLIPGTSFLP---QQLHSEPPVMTKAIGSNCTK 733

Query: 1146 VXXXXXXXXXXXXXXXXXXXVHKQGSLIGRAIDLTKLEGYDDLISELERLFNMKG 1310
                                 HK GS++ +AI+  KL+ +DDLI  L+ LF+M+G
Sbjct: 734  ----------RTAVVRSKLQFHKLGSVVDQAINRWKLDRHDDLICALKHLFDMEG 778


>emb|CBI30623.3| unnamed protein product [Vitis vinifera]
          Length = 701

 Score =  279 bits (714), Expect = 1e-72
 Identities = 175/389 (44%), Positives = 211/389 (54%), Gaps = 7/389 (1%)
 Frame = +3

Query: 3    RWPGSKWRCLVVRWDDDIVRNRQNRVSPWEIEPSGSVLASNNYMAPGSKRTRTGLPPAKS 182
            RWPGSKWRCL+VRWDD I  NR NRVSPWEIE SGS+  S +   PGSKRTR GLP  + 
Sbjct: 349  RWPGSKWRCLLVRWDD-IEANRHNRVSPWEIELSGSLSGSGSLTVPGSKRTRIGLPGTRP 407

Query: 183  SFPVCNQTGLSDFGESLRFQKVLQGQEFLGFTSPHTGT-IQNHHESEVRRCIPGWNDSGM 359
             F V N  G+SDFGES RFQKVLQGQE  GF +P+ G   Q+HH SE+ RC PG + SG+
Sbjct: 408  DFSVPNGMGVSDFGESSRFQKVLQGQEIFGFNTPYDGVDTQDHHPSEI-RCFPGSSCSGI 466

Query: 360  ARMGSGILIQPGSSYTSYKGVGFGESVRFHKVLQGQEIFPKQPQERAPVDKWVLDNGGFG 539
            A +G+G+    G+S  SYKG+GFGES RFHKVLQGQE FP  P  RA       +NG FG
Sbjct: 467  AAIGNGVRNPLGNSDISYKGIGFGESFRFHKVLQGQETFPSPPCGRALSANQAHENGSFG 526

Query: 540  ISDRAHSSTVENRWSSLMQGVNAHVQHXXXXXXXXXXXXVLRFQQANAQVFYPNSMYGTY 719
            I D     T  N W +L+QG NAH               VL FQQA+       SM+   
Sbjct: 527  IFDGVQVPTSRNGWPALVQGYNAHTHLSTPSVQVSSPSSVLMFQQASTAAPNIYSMHSAN 586

Query: 720  NQDGE----NRNAFGLCNSSKTLGGKPTSSSVYQPQDNMDVLESLHTLKSTEDHNRIGSL 887
            NQ+ E    NR++F +               VY                        G  
Sbjct: 587  NQEKEQEISNRSSFDI-------------PEVY------------------------GEK 609

Query: 888  LPPASPMTRKNPRDSQNLPTGRSDCRLFGFSLAGEADVGNEVDTTTPVTSPSLTDNLNQG 1067
            L P    +R        +PT +S CRLFGFSL  E  +GN+VD  TPVTS     +L  G
Sbjct: 610  LTP----SRCELSVRGGVPTCKSSCRLFGFSLTEERSIGNKVDNPTPVTS-----SLIPG 660

Query: 1068 T--LPSDVEQFQFRPPVLIETVGRSCTKV 1148
            T  LP   +Q    PPV+ + +G +CTKV
Sbjct: 661  TSFLP---QQLHSEPPVMTKAIGSNCTKV 686