BLASTX nr result

ID: Coptis21_contig00001987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001987
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300195.1| predicted protein [Populus trichocarpa] gi|2...    59   6e-07

>ref|XP_002300195.1| predicted protein [Populus trichocarpa] gi|222847453|gb|EEE85000.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 33/59 (55%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
 Frame = +1

Query: 283 KTEAKAPTKTDPPKATLFKAAPLLGRGGVPSGDP---TGDKPVPGDPTGVTEGGDGGEL 450
           KT AK PT TDPP+A LFK APL G  G  +G+P    G  PV G  TGVT  G+GGE+
Sbjct: 27  KTAAKTPTATDPPRANLFKTAPLAG-AGATAGEPIVEVGTSPVEG--TGVTGRGEGGEV 82


Top