BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001971
         (1748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts ...   431   e-118
ref|NP_192850.2| putative translation elongation factor Ts [Arab...   426   e-116
ref|XP_002524565.1| elongation factor ts, putative [Ricinus comm...   424   e-116
ref|XP_002282316.1| PREDICTED: elongation factor Ts, mitochondri...   419   e-115
ref|XP_002872550.1| hypothetical protein ARALYDRAFT_489950 [Arab...   418   e-114

>ref|NP_001234645.1| ethylene-responsive elongation factor EF-Ts precursor [Solanum
            lycopersicum] gi|5669636|gb|AAD46403.1|AF096247_1
            ethylene-responsive elongation factor EF-Ts precursor
            [Solanum lycopersicum]
          Length = 391

 Score =  431 bits (1108), Expect = e-118
 Identities = 237/379 (62%), Positives = 285/379 (75%), Gaps = 3/379 (0%)
 Frame = -2

Query: 1555 KNHFGILFNHLGSSRQSVHGYTSQIA---KINEAGTLFNSSNELSSGRQLFLRSFSAEVS 1385
            K    I++  L SS  S H Y++       I ++G  F+          + +R +SAE+S
Sbjct: 8    KRPIAIIYKSLNSSICSGHDYSTLTRYGNSIAKSGGYFHQHGNGPRSCAVSIRRYSAEIS 67

Query: 1384 SSDQLNLIRLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLASKKSSRTATEGL 1205
            SS+Q+NLI+ LRERTSAPIK+VK+ALV  NWDIE AQ +LRKRGIVLASKKSSRTA EGL
Sbjct: 68   SSEQMNLIKQLRERTSAPIKEVKAALVTSNWDIEAAQKDLRKRGIVLASKKSSRTAAEGL 127

Query: 1204 LALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXSVESCPEQVSTAFSLGSDYL 1025
            LALAQNE KAA+IELNCETDFV+RNEIFQY           +E   +Q   AF +G  +L
Sbjct: 128  LALAQNERKAAVIELNCETDFVARNEIFQYLALSLAKLALLLEGS-QQSFAAFPIG--HL 184

Query: 1024 EELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXXXXYLHTSPQPG 845
            EELK+NLDHPKLSGE +VQ AITEVAAM+GENVKLRR              YLHTSPQPG
Sbjct: 185  EELKLNLDHPKLSGEKSVQNAITEVAAMMGENVKLRRGFAMSAPSLGVISTYLHTSPQPG 244

Query: 844  LGRLAGIVTLESEDEKIPLDALHRVGSELAMHVVAAKPQFLSRELVSSEALERERDILKS 665
            +GR+AGI++LE ED+ +  DAL RVGSELAMHVVAAKP FL++E VSS+AL  ER+ILKS
Sbjct: 245  VGRIAGILSLEVEDKNVSEDALQRVGSELAMHVVAAKPLFLTKEDVSSDALSNEREILKS 304

Query: 664  QAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLIDDLSKEVGFPVKVG 485
            QAES+GKPQIA+EKMVEGR+RKY EEVVL+EQKFIVND +NVK L+ +LSK+VG PVK+G
Sbjct: 305  QAESSGKPQIAVEKMVEGRLRKYFEEVVLMEQKFIVNDTMNVKTLLSNLSKDVGSPVKIG 364

Query: 484  KFFRMEVGEGIRREETSSE 428
             F RMEVGEG++R E S+E
Sbjct: 365  SFLRMEVGEGLQRLEASNE 383


>ref|NP_192850.2| putative translation elongation factor Ts [Arabidopsis thaliana]
            gi|75287865|sp|Q5XF75.1|EFTS_ARATH RecName:
            Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
            Short=EF-TsMt; Flags: Precursor
            gi|52627103|gb|AAU84678.1| At4g11120 [Arabidopsis
            thaliana] gi|55167888|gb|AAV43776.1| At4g11120
            [Arabidopsis thaliana] gi|332657575|gb|AEE82975.1|
            putative translation elongation factor Ts [Arabidopsis
            thaliana]
          Length = 395

 Score =  426 bits (1095), Expect = e-116
 Identities = 236/391 (60%), Positives = 286/391 (73%), Gaps = 7/391 (1%)
 Frame = -2

Query: 1579 MSFSRAAAKNHFGILFNHLGSSRQSVHGYTSQIAKINEAGTLFNSS-----NELSSGRQL 1415
            M+F+RA  +   G+ +  + S   S + Y++  +K  E  + + SS       L  G   
Sbjct: 1    MAFARAV-RRPIGVFYYSVSSRFSSGNEYSTVASKF-ETLSQYKSSVPSGYTSLVRGFGN 58

Query: 1414 FLRSFSAEV--SSSDQLNLIRLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLA 1241
            F+RSFS+E   + SDQ++LI+ LRERTSAPIKDVK++LV CNWD+E AQ +LRKRG VLA
Sbjct: 59   FIRSFSSEAPPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRGKVLA 118

Query: 1240 SKKSSRTATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXSVESCPEQ 1061
            SKKSSRTA EG+LA+AQNE K A+IELNCETDFV+RNEIFQY           VES  +Q
Sbjct: 119  SKKSSRTAAEGMLAVAQNEGKVAVIELNCETDFVARNEIFQYLALAMAKHALLVESSSQQ 178

Query: 1060 VSTAFSLGSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXX 881
            VS  F  G +  EE K+NLDHPK++GETTV  A+TEVAA++GENVK RR           
Sbjct: 179  VSGVFPFGPELFEEFKLNLDHPKVNGETTVSNAVTEVAAIMGENVKFRRGFLMSKSSAGV 238

Query: 880  XXXYLHTSPQPGLGRLAGIVTLESEDEKIPLDALHRVGSELAMHVVAAKPQFLSRELVSS 701
               YLHTSPQPGLGR+AGIV+LE E E   L+A+ RVGSELAMHVVAAKP FLS++LVSS
Sbjct: 239  LSAYLHTSPQPGLGRIAGIVSLEVEGENTQLEAIQRVGSELAMHVVAAKPLFLSKDLVSS 298

Query: 700  EALERERDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLIDD 521
            EA+  ER+ILKSQAESTGK Q+AIEK+VEGR+RKY EEV L+EQKFIVNDAIN+K L+D+
Sbjct: 299  EAMANEREILKSQAESTGKNQMAIEKIVEGRLRKYFEEVALMEQKFIVNDAINIKTLVDN 358

Query: 520  LSKEVGFPVKVGKFFRMEVGEGIRREETSSE 428
            LSKEVG PVKV  F R+EVGEGI R E S E
Sbjct: 359  LSKEVGSPVKVTDFLRVEVGEGIERLEASDE 389


>ref|XP_002524565.1| elongation factor ts, putative [Ricinus communis]
            gi|313118247|sp|B9SEZ6.1|EFTS_RICCO RecName:
            Full=Elongation factor Ts, mitochondrial; Short=EF-Ts;
            Short=EF-TsMt; Flags: Precursor
            gi|223536118|gb|EEF37773.1| elongation factor ts,
            putative [Ricinus communis]
          Length = 379

 Score =  424 bits (1090), Expect = e-116
 Identities = 232/384 (60%), Positives = 284/384 (73%), Gaps = 1/384 (0%)
 Frame = -2

Query: 1579 MSFSRAAAKNHFGILFNHLGSSRQSVHGYTSQIAKINEAGTLFNSSNELSSGRQLFLRSF 1400
            M+  R A +    +LF+ LG+  Q+   +  + A  +  G              +F+R F
Sbjct: 1    MALYRTARRPLQMMLFSRLGNPEQNYSSWARKDASQSAFG--------------MFVRLF 46

Query: 1399 SAEV-SSSDQLNLIRLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLASKKSSR 1223
            SA   ++++Q++LI+ LRERTSAPIKDVK++LV+CNWDIE AQ +LRKRG VLASKKS R
Sbjct: 47   SAHAPAAAEQMSLIKQLRERTSAPIKDVKASLVDCNWDIEAAQKDLRKRGKVLASKKSGR 106

Query: 1222 TATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXSVESCPEQVSTAFS 1043
             ATEGLLALAQNE KAALIELNCETDFV+RN+IFQ             E+  +Q S    
Sbjct: 107  AATEGLLALAQNEGKAALIELNCETDFVARNDIFQCLALSLAKQALLTENTAQQASGIHP 166

Query: 1042 LGSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXXXXYLH 863
            +G + LE+L INL+HPK+SGETTVQ AITEVAAM+GENVKLRR              YLH
Sbjct: 167  VGPECLEDLMINLEHPKISGETTVQNAITEVAAMMGENVKLRRGFVMSTSLPGVLSTYLH 226

Query: 862  TSPQPGLGRLAGIVTLESEDEKIPLDALHRVGSELAMHVVAAKPQFLSRELVSSEALERE 683
            TSPQPGLGR+AG+++LE ED    LD LH VGSELAMHVVAAKP FL++ELVSS+ALE E
Sbjct: 227  TSPQPGLGRIAGLLSLEIEDGNSQLDVLHHVGSELAMHVVAAKPLFLTKELVSSDALESE 286

Query: 682  RDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLIDDLSKEVG 503
            R+ILKSQAESTGK Q+AIEKMVEGR+RKY EEVVL+EQKFI+NDA+NVK ++++LSKEVG
Sbjct: 287  REILKSQAESTGKSQMAIEKMVEGRLRKYYEEVVLMEQKFIINDAVNVKTVLNNLSKEVG 346

Query: 502  FPVKVGKFFRMEVGEGIRREETSS 431
             PVK+G FFRMEVGEGI+R E +S
Sbjct: 347  SPVKIGSFFRMEVGEGIQRLEATS 370


>ref|XP_002282316.1| PREDICTED: elongation factor Ts, mitochondrial [Vitis vinifera]
            gi|297738982|emb|CBI28227.3| unnamed protein product
            [Vitis vinifera]
          Length = 378

 Score =  419 bits (1078), Expect = e-115
 Identities = 220/329 (66%), Positives = 268/329 (81%)
 Frame = -2

Query: 1417 LFLRSFSAEVSSSDQLNLIRLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVLAS 1238
            +F R FSAE  +S+ +NLI+ LRERTS+PIKDVK+AL++CNWDIE AQ ELRKRG VLAS
Sbjct: 42   IFPRRFSAEAPASEHMNLIKQLRERTSSPIKDVKAALIDCNWDIEAAQKELRKRGKVLAS 101

Query: 1237 KKSSRTATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXSVESCPEQV 1058
            K S+RTA +GLLALAQNE++AA+IELNCETDFV+RN+IFQY          SVE+ P   
Sbjct: 102  KMSARTAAQGLLALAQNETRAAVIELNCETDFVARNDIFQYLASSLAKLALSVENPPLSA 161

Query: 1057 STAFSLGSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXXXX 878
            +    +G +YLE+LK+N DHPK SGETTVQ AITEVAAM+GENV+LRR            
Sbjct: 162  AGVSPVGPEYLEDLKMNFDHPKFSGETTVQNAITEVAAMMGENVRLRR-GFLMSTPNGIV 220

Query: 877  XXYLHTSPQPGLGRLAGIVTLESEDEKIPLDALHRVGSELAMHVVAAKPQFLSRELVSSE 698
              YLHT P+PGLGR+AG+++LE+ED+    DAL RVGSELAMHVVAAKP FL+RELVSSE
Sbjct: 221  STYLHTCPRPGLGRIAGVLSLEAEDQLSLSDALQRVGSELAMHVVAAKPLFLTRELVSSE 280

Query: 697  ALERERDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLIDDL 518
            A+E ER+IL+SQAESTGK Q+AIEKMVEGR++KY+EEVVL+EQKF+VND+INVK ++++L
Sbjct: 281  AMESEREILRSQAESTGKSQLAIEKMVEGRLKKYVEEVVLMEQKFVVNDSINVKTVLNNL 340

Query: 517  SKEVGFPVKVGKFFRMEVGEGIRREETSS 431
            SKEVG  VK+G FFRMEVGEGI+RE TSS
Sbjct: 341  SKEVGSSVKIGSFFRMEVGEGIQREGTSS 369


>ref|XP_002872550.1| hypothetical protein ARALYDRAFT_489950 [Arabidopsis lyrata subsp.
            lyrata] gi|297318387|gb|EFH48809.1| hypothetical protein
            ARALYDRAFT_489950 [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score =  418 bits (1075), Expect = e-114
 Identities = 230/392 (58%), Positives = 283/392 (72%), Gaps = 8/392 (2%)
 Frame = -2

Query: 1579 MSFSRAAAKNHFGILFNHLGSSRQSVHGYTSQIAKINEAGTLFNSSNELSSGRQL----- 1415
            M+F+RA  +   G+ +  +     S + Y++  +K+    TL    + +SSG        
Sbjct: 1    MAFARAV-RRPIGVFYYSVSGRFSSGNDYSTVASKLE---TLSQYKSSVSSGYTSPVRGF 56

Query: 1414 --FLRSFSAEVSS-SDQLNLIRLLRERTSAPIKDVKSALVNCNWDIENAQTELRKRGIVL 1244
              F+RSFS+E  + SDQ++LI+ LRERTSAPIKDVK++LV CNWD+E AQ +LRKRG VL
Sbjct: 57   GSFIRSFSSEAPAVSDQMSLIKQLRERTSAPIKDVKASLVECNWDLEAAQKDLRKRGKVL 116

Query: 1243 ASKKSSRTATEGLLALAQNESKAALIELNCETDFVSRNEIFQYXXXXXXXXXXSVESCPE 1064
            ASKKSSRTA EG+LA+AQNE K  +IELNCETDFV+RNEIFQY           VE+  +
Sbjct: 117  ASKKSSRTAAEGMLAVAQNEGKVVVIELNCETDFVARNEIFQYLALAMAKHALLVENSSQ 176

Query: 1063 QVSTAFSLGSDYLEELKINLDHPKLSGETTVQGAITEVAAMVGENVKLRRXXXXXXXXXX 884
            QVS     G +  EE K+NLDHPK++GETTV  A+TEVAA++GENVK RR          
Sbjct: 177  QVSGVLPFGPELFEEFKLNLDHPKVNGETTVSNAVTEVAAIMGENVKFRRGFLMSKSSAG 236

Query: 883  XXXXYLHTSPQPGLGRLAGIVTLESEDEKIPLDALHRVGSELAMHVVAAKPQFLSRELVS 704
                YLHTSPQPGLGR+AGIV+LE E E   L+A+ RVGSELAM VVAAKP FLS++LVS
Sbjct: 237  VLSAYLHTSPQPGLGRIAGIVSLEVEGENTQLEAIQRVGSELAMQVVAAKPLFLSKDLVS 296

Query: 703  SEALERERDILKSQAESTGKPQIAIEKMVEGRMRKYMEEVVLLEQKFIVNDAINVKKLID 524
            SEA+  ER+ILKSQAESTGK Q+AIEK+VEGR+RKY EEV L+EQKFI+NDAIN+K L+D
Sbjct: 297  SEAIANEREILKSQAESTGKNQMAIEKIVEGRLRKYFEEVALMEQKFILNDAINIKTLVD 356

Query: 523  DLSKEVGFPVKVGKFFRMEVGEGIRREETSSE 428
            +LSKEVG PVKV  F R+EVGEGI R E S E
Sbjct: 357  NLSKEVGSPVKVTNFLRVEVGEGIERLEASDE 388