BLASTX nr result

ID: Coptis21_contig00001969 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001969
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268271.1| PREDICTED: meiotically up-regulated gene 71 ...    77   7e-23
ref|XP_002325340.1| predicted protein [Populus trichocarpa] gi|2...    68   6e-18
ref|XP_002319111.1| predicted protein [Populus trichocarpa] gi|2...    62   8e-18
ref|XP_003554042.1| PREDICTED: meiotically up-regulated gene 71 ...    62   1e-16
ref|XP_003572928.1| PREDICTED: meiotically up-regulated gene 71 ...    50   1e-11

>ref|XP_002268271.1| PREDICTED: meiotically up-regulated gene 71 protein [Vitis
           vinifera] gi|302143608|emb|CBI22361.3| unnamed protein
           product [Vitis vinifera]
          Length = 741

 Score = 77.4 bits (189), Expect(2) = 7e-23
 Identities = 36/56 (64%), Positives = 49/56 (87%)
 Frame = +2

Query: 203 DELLIIFTDAFNEFAEISKRIKTGTKPMFNLVPVLGAGKSAVPMDDLITCELFASK 370
           + L ++FT+AFNEFAE+S+RIK G +P+FNL+PVLGAGK++  MDD+ITCELF+ K
Sbjct: 686 ETLSLMFTNAFNEFAEMSQRIKIGKEPIFNLIPVLGAGKTS-SMDDIITCELFSQK 740



 Score = 57.0 bits (136), Expect(2) = 7e-23
 Identities = 27/50 (54%), Positives = 36/50 (72%)
 Frame = +1

Query: 40  CMTNGDFQYFESQKHIKQITRFCIYLLDRILLESYFSWEDITSLRFYFST 189
           C  N     F +++ I +ITRFCIYLLD++L  + FSWEDIT+L+FYF T
Sbjct: 631 CNRNNQDHRFGNEQ-IDRITRFCIYLLDKVLAGNGFSWEDITNLKFYFPT 679


>ref|XP_002325340.1| predicted protein [Populus trichocarpa] gi|222862215|gb|EEE99721.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score = 68.2 bits (165), Expect(2) = 6e-18
 Identities = 32/65 (49%), Positives = 49/65 (75%)
 Frame = +2

Query: 176 STSLQNESADELLIIFTDAFNEFAEISKRIKTGTKPMFNLVPVLGAGKSAVPMDDLITCE 355
           ++S+Q E+   L ++F +A NE  EI +R++ G +P+FN+VPVLG+G SA  M+++ITCE
Sbjct: 689 NSSIQLET---LSLLFKNAMNELVEIDRRVQIGKEPIFNIVPVLGSGSSAASMNNIITCE 745

Query: 356 LFASK 370
           LFA K
Sbjct: 746 LFARK 750



 Score = 49.7 bits (117), Expect(2) = 6e-18
 Identities = 20/45 (44%), Positives = 33/45 (73%)
 Frame = +1

Query: 55  DFQYFESQKHIKQITRFCIYLLDRILLESYFSWEDITSLRFYFST 189
           D+    S+  +++++RFC+YLLD+ ++E+ FSWED  +LR YF T
Sbjct: 644 DYHNSVSKGDMERVSRFCVYLLDKGIVENGFSWEDTMNLRIYFPT 688


>ref|XP_002319111.1| predicted protein [Populus trichocarpa] gi|222857487|gb|EEE95034.1|
           predicted protein [Populus trichocarpa]
          Length = 742

 Score = 62.4 bits (150), Expect(2) = 8e-18
 Identities = 27/56 (48%), Positives = 41/56 (73%)
 Frame = +2

Query: 203 DELLIIFTDAFNEFAEISKRIKTGTKPMFNLVPVLGAGKSAVPMDDLITCELFASK 370
           + L +   +A NE AE+ +R++ G +P++N+VPVL AG SA  M+++ITCELFA K
Sbjct: 686 ETLSLALKNAMNELAEMDQRVQVGKEPIYNIVPVLAAGSSAASMNNIITCELFARK 741



 Score = 55.1 bits (131), Expect(2) = 8e-18
 Identities = 22/45 (48%), Positives = 34/45 (75%)
 Frame = +1

Query: 55  DFQYFESQKHIKQITRFCIYLLDRILLESYFSWEDITSLRFYFST 189
           D Q   S+ H++++ RFC+YLLD++++E+ FSWED  +LR YF T
Sbjct: 635 DHQNSVSKGHMERVLRFCVYLLDKVIMENGFSWEDTMNLRTYFPT 679


>ref|XP_003554042.1| PREDICTED: meiotically up-regulated gene 71 protein-like [Glycine
           max]
          Length = 747

 Score = 62.0 bits (149), Expect(2) = 1e-16
 Identities = 28/52 (53%), Positives = 42/52 (80%), Gaps = 1/52 (1%)
 Frame = +2

Query: 218 IFTDAFNEFAEIS-KRIKTGTKPMFNLVPVLGAGKSAVPMDDLITCELFASK 370
           +F +A  E +E+S K++KTG +P+FN+VPV+G+G+SA  MDD++TCEL A K
Sbjct: 695 MFCNALFELSEMSQKKLKTGEEPIFNIVPVIGSGRSASSMDDVVTCELMAQK 746



 Score = 51.6 bits (122), Expect(2) = 1e-16
 Identities = 20/40 (50%), Positives = 32/40 (80%)
 Frame = +1

Query: 61  QYFESQKHIKQITRFCIYLLDRILLESYFSWEDITSLRFY 180
           Q+   + H+++I++FCIYLLD+++ +  F+WEDI SLRFY
Sbjct: 641 QHSLPKAHMEKISKFCIYLLDKVMTDDDFAWEDIMSLRFY 680


>ref|XP_003572928.1| PREDICTED: meiotically up-regulated gene 71 protein-like
           [Brachypodium distachyon]
          Length = 678

 Score = 50.1 bits (118), Expect(2) = 1e-11
 Identities = 26/58 (44%), Positives = 37/58 (63%)
 Frame = +2

Query: 197 SADELLIIFTDAFNEFAEISKRIKTGTKPMFNLVPVLGAGKSAVPMDDLITCELFASK 370
           +AD +   F++ F E  E     +T   P+FN+VPV G+G SA  M+++ITCEL ASK
Sbjct: 621 AADVMSRAFSEVFTELGEADSSCRTDGVPIFNMVPVSGSGCSA-SMNNIITCELLASK 677



 Score = 46.2 bits (108), Expect(2) = 1e-11
 Identities = 16/40 (40%), Positives = 30/40 (75%)
 Frame = +1

Query: 73  SQKHIKQITRFCIYLLDRILLESYFSWEDITSLRFYFSTK 192
           S +H+K + +FC + L +IL+++ F W+++T LRFY+S +
Sbjct: 578 SDEHLKALAKFCAFQLAKILIDNGFCWDNVTMLRFYYSVE 617


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