BLASTX nr result

ID: Coptis21_contig00001930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001930
         (1378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82674.1| hypothetical protein VITISV_034254 [Vitis vinifera]   149   1e-33
ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group] g...   147   8e-33
emb|CAN66987.1| hypothetical protein VITISV_044466 [Vitis vinifera]   146   1e-32
gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...   145   2e-32
emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]   143   1e-31

>emb|CAN82674.1| hypothetical protein VITISV_034254 [Vitis vinifera]
          Length = 241

 Score =  149 bits (377), Expect = 1e-33
 Identities = 74/177 (41%), Positives = 115/177 (64%)
 Frame = +3

Query: 291 QTGALLRDFRRMHAPSFKGSPDPEQAEEWLIQTEKILEAMECNETQKVTLASFMLEAEAG 470
           Q  +L+ +F+ ++ PSF+G P+  +AE W+ + +KIL+ M   E ++V+LASFML  EA 
Sbjct: 42  QNVSLILEFKALNPPSFRGGPNFLEAENWMKEIKKILDVMAVPEERRVSLASFMLRDEAD 101

Query: 471 HWWRSRKNIQGEVPMAWDKFQKFFLEQYVPESARDRKHMEFMSLVQGNKTVNQYEADFTR 650
           +WW   K  Q    M W +F++  L  Y PE+ R +K  EF+ LVQ N TV +Y A FT+
Sbjct: 102 NWWDMIKTTQDVTKMVWMQFEELLLSNYFPEAVRRQKRAEFIHLVQRNMTVTEYAAKFTQ 161

Query: 651 LSRYAPDLIATEVQKAKKYVRGLKKFLRDRMAGFEITSYADSVNRAQRIEREDEDIQ 821
           LSRYAP+++A E  +A+++  GL+  +R ++A F + +Y++ V RA  IERE E+ Q
Sbjct: 162 LSRYAPNVVADEQMRAEQFQEGLRLNIRAQVAPFMLRTYSEVVARALVIEREMEEAQ 218


>ref|NP_001176105.1| Os10g0357350 [Oryza sativa Japonica Group]
           gi|255679330|dbj|BAH94833.1| Os10g0357350 [Oryza sativa
           Japonica Group]
          Length = 443

 Score =  147 bits (370), Expect = 8e-33
 Identities = 63/173 (36%), Positives = 117/173 (67%), Gaps = 1/173 (0%)
 Frame = +3

Query: 306 LRDFRRMHAPSFKGSPDPEQAEEWLIQTEKILEAMECNETQKVTLASFMLEAEAGHWWRS 485
           L +F+++  P+F G+ +P +AEEW++  EK  EAM C + +K+  A++ML++ A  WW +
Sbjct: 159 LGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDA 218

Query: 486 RKNIQGE-VPMAWDKFQKFFLEQYVPESARDRKHMEFMSLVQGNKTVNQYEADFTRLSRY 662
            K    E + + W+ F++ F ++Y PES +  K  EF+ L QGNK+V +YE +F+RL+R+
Sbjct: 219 HKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAEYEIEFSRLARF 278

Query: 663 APDLIATEVQKAKKYVRGLKKFLRDRMAGFEITSYADSVNRAQRIEREDEDIQ 821
           AP+ + T+  KA+++  GL++ L+ R+  FE+T + + V++AQ +E+ ++ ++
Sbjct: 279 APEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKAQLLEKGEDSVE 331


>emb|CAN66987.1| hypothetical protein VITISV_044466 [Vitis vinifera]
          Length = 360

 Score =  146 bits (369), Expect = 1e-32
 Identities = 73/189 (38%), Positives = 120/189 (63%), Gaps = 5/189 (2%)
 Frame = +3

Query: 258 RAMARMTPYQGQT----GALLRDFRRMHAPSFKGSPDPEQAEEWLIQTEKILEAMECNET 425
           +A A  T  QGQ+    G+   DF+++  P F G+ DP +AE W+++ EK    ++C+E 
Sbjct: 80  QARAVGTNVQGQSSSSRGSSFDDFKKLGPPYFSGATDPTEAEAWILKMEKFFGVIDCSEE 139

Query: 426 QKVTLASFMLEAEAGHWWR-SRKNIQGEVPMAWDKFQKFFLEQYVPESARDRKHMEFMSL 602
           QK + A+FML+ E  HWWR +R+ ++ + P+ W +F++ F ++Y P+S R +K  EF+ L
Sbjct: 140 QKASYAAFMLDKETDHWWRMTRRLLEDQGPITWRQFREAFYKKYFPDSVRRQKVGEFIRL 199

Query: 603 VQGNKTVNQYEADFTRLSRYAPDLIATEVQKAKKYVRGLKKFLRDRMAGFEITSYADSVN 782
            QG+ TV QYEA FT LSR++P LIATE +KA K+   LK +L+++ +   +  Y++   
Sbjct: 200 EQGDMTVAQYEAKFTELSRFSPQLIATEEEKALKFQDXLKPYLKNKXSILXLGXYSEYRE 259

Query: 783 RAQRIERED 809
           + ++  R D
Sbjct: 260 QQRKRNRSD 268


>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
            gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
            kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
            Group] gi|31431495|gb|AAP53268.1| retrotransposon
            protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1230

 Score =  145 bits (366), Expect = 2e-32
 Identities = 85/299 (28%), Positives = 152/299 (50%), Gaps = 1/299 (0%)
 Frame = +3

Query: 306  LRDFRRMHAPSFKGSPDPEQAEEWLIQTEKILEAMECNETQKVTLASFMLEAEAGHWWRS 485
            L +F+++  P+F G+ +P +AEEW++  EK  EAM C + +K+  A++ML++ A  WW +
Sbjct: 71   LGEFQKLKPPTFSGTANPLEAEEWIVAMEKSFEAMGCTDKEKIIYATYMLQSSAFEWWDA 130

Query: 486  RKNIQGE-VPMAWDKFQKFFLEQYVPESARDRKHMEFMSLVQGNKTVNQYEADFTRLSRY 662
             K    E + + W+ F++ F ++Y PES +  K  EF+ L QGNK+V +YE +F+RL+R+
Sbjct: 131  HKKSYSERIFITWELFKEAFYKKYFPESVKRMKEKEFLELKQGNKSVAEYEIEFSRLARF 190

Query: 663  APDLIATEVQKAKKYVRGLKKFLRDRMAGFEITSYADSVNRAQRIEREDEDIQLSKFQTG 842
            AP+ + T+  KA+++  GL++ L+ R+  FE+T + + V++AQ +E+             
Sbjct: 191  APEFVQTDGSKARRFESGLRQPLKRRVEAFELTIFREVVSKAQLLEK------------- 237

Query: 843  PSSHATQQVLSGYDPSKRPRMLTMDPRPQQVYRPYNQPFQGRFQMAPLQGQQAQRPTKSV 1022
               +  Q++  G              +PQ+ ++  N   QGRF+     GQ  ++ +++ 
Sbjct: 238  --GYHEQRIEHG--------------QPQKKFKTNNPQNQGRFR-GNYSGQMQRKSSENQ 280

Query: 1023 PPFRPQRADXXXXXXXXXXXXSLPPALPRPTQQSQGQASKPPVTCYGCGETGHIQRFCP 1199
                P                 +P   P    +           C+ CGE GH +  CP
Sbjct: 281  GRKCP-----------ICQGSHVPSICPNCWGR-----------CFECGEAGHTRYQCP 317


>emb|CAN62233.1| hypothetical protein VITISV_010121 [Vitis vinifera]
          Length = 1797

 Score =  143 bits (360), Expect = 1e-31
 Identities = 71/182 (39%), Positives = 120/182 (65%), Gaps = 5/182 (2%)
 Frame = +3

Query: 258  RAMARMTPYQGQT----GALLRDFRRMHAPSFKGSPDPEQAEEWLIQTEKILEAMECNET 425
            +A A  T  QGQ+    G+   DF+++  P F G+ DP +AE W+++ EK    ++C+E 
Sbjct: 533  QARAVGTNVQGQSSSSRGSSFDDFKKLGPPYFSGATDPTEAEAWILKMEKFFGVIDCSEE 592

Query: 426  QKVTLASFMLEAEAGHWWR-SRKNIQGEVPMAWDKFQKFFLEQYVPESARDRKHMEFMSL 602
            QK + A+FML+ EA HWWR +R+ ++ + P+ W +F++ F ++Y P+S R +K  EF+ L
Sbjct: 593  QKASYAAFMLDKEAYHWWRMTRRLLEDQGPITWRQFREAFYKKYFPDSVRWQKVGEFIRL 652

Query: 603  VQGNKTVNQYEADFTRLSRYAPDLIATEVQKAKKYVRGLKKFLRDRMAGFEITSYADSVN 782
             QG+  V QYEA FT LS ++P LIA E +KA K+  GLK +L+++++  ++  Y+++++
Sbjct: 653  EQGDMIVAQYEAKFTELSCFSPQLIAIEEEKALKFQDGLKPYLKNKISILKLVVYSENLD 712

Query: 783  RA 788
             A
Sbjct: 713  GA 714


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