BLASTX nr result

ID: Coptis21_contig00001919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001919
         (886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63475.1| hypothetical protein VITISV_016798 [Vitis vinifera]   211   2e-52
ref|XP_002275863.1| PREDICTED: universal stress protein A-like p...   210   3e-52
emb|CBI36939.3| unnamed protein product [Vitis vinifera]              190   4e-46
ref|XP_002515296.1| conserved hypothetical protein [Ricinus comm...   189   6e-46
ref|XP_002320308.1| predicted protein [Populus trichocarpa] gi|1...   187   2e-45

>emb|CAN63475.1| hypothetical protein VITISV_016798 [Vitis vinifera]
          Length = 171

 Score =  211 bits (536), Expect = 2e-52
 Identities = 100/156 (64%), Positives = 128/156 (82%), Gaps = 1/156 (0%)
 Frame = -1

Query: 682 KRRKIVVAVNESEESMYALSWCLTNIKIDLN-SQYTLILLYIKPPPLVYSSLDITGYLFG 506
           K ++IVVAV+ESEESMYALSWCLTN+  D N ++ TLILLY+KPPP +Y+SLD  GYLF 
Sbjct: 14  KEKRIVVAVDESEESMYALSWCLTNLVSDANKTKSTLILLYVKPPPPLYNSLDAAGYLFA 73

Query: 505 SDIIAAIEKYGKELADSVMGRAQVICNDYPNIIQIEKKVGCGDAKDKICEILEKLGADML 326
           +D++ A+EKYG +L +SVM RA+ +  D+ +I+ +EKKVG GDAKD IC  +EKLGAD+L
Sbjct: 74  NDVVGAMEKYGWDLVNSVMARAEAVXKDFSSIMSVEKKVGTGDAKDVICGAVEKLGADIL 133

Query: 325 VIGSHGYGSIKRALLGSVSDYCSKKAKCPVLIVKRP 218
           V+GSH YG  KRALLGSVSD+C+K  KCPV++VKRP
Sbjct: 134 VMGSHDYGFFKRALLGSVSDHCAKHVKCPVVVVKRP 169


>ref|XP_002275863.1| PREDICTED: universal stress protein A-like protein [Vitis vinifera]
          Length = 171

 Score =  210 bits (535), Expect = 3e-52
 Identities = 100/156 (64%), Positives = 128/156 (82%), Gaps = 1/156 (0%)
 Frame = -1

Query: 682 KRRKIVVAVNESEESMYALSWCLTNIKIDLN-SQYTLILLYIKPPPLVYSSLDITGYLFG 506
           K ++IVVAV+ESEESMYALSWCLTN+  D N ++ TLILLY+KPPP +Y+SLD  GYLF 
Sbjct: 14  KEKRIVVAVDESEESMYALSWCLTNLVSDANKTKSTLILLYVKPPPPLYNSLDAAGYLFA 73

Query: 505 SDIIAAIEKYGKELADSVMGRAQVICNDYPNIIQIEKKVGCGDAKDKICEILEKLGADML 326
           +D++ A+EKYG +L +SVM RA+ +  D+ +I+ +EKKVG GDAKD IC  +EKLGAD+L
Sbjct: 74  NDVVGAMEKYGWDLVNSVMARAEAVYKDFSSIMSVEKKVGTGDAKDVICGAVEKLGADIL 133

Query: 325 VIGSHGYGSIKRALLGSVSDYCSKKAKCPVLIVKRP 218
           V+GSH YG  KRALLGSVSD+C+K  KCPV++VKRP
Sbjct: 134 VMGSHDYGFFKRALLGSVSDHCAKHVKCPVVVVKRP 169


>emb|CBI36939.3| unnamed protein product [Vitis vinifera]
          Length = 143

 Score =  190 bits (482), Expect = 4e-46
 Identities = 89/141 (63%), Positives = 114/141 (80%), Gaps = 1/141 (0%)
 Frame = -1

Query: 637 MYALSWCLTNIKIDLN-SQYTLILLYIKPPPLVYSSLDITGYLFGSDIIAAIEKYGKELA 461
           MYALSWCLTN+  D N ++ TLILLY+KPPP +Y+SLD  GYLF +D++ A+EKYG +L 
Sbjct: 1   MYALSWCLTNLVSDANKTKSTLILLYVKPPPPLYNSLDAAGYLFANDVVGAMEKYGWDLV 60

Query: 460 DSVMGRAQVICNDYPNIIQIEKKVGCGDAKDKICEILEKLGADMLVIGSHGYGSIKRALL 281
           +SVM RA+ +  D+ +I+ +EKKVG GDAKD IC  +EKLGAD+LV+GSH YG  KRALL
Sbjct: 61  NSVMARAEAVYKDFSSIMSVEKKVGTGDAKDVICGAVEKLGADILVMGSHDYGFFKRALL 120

Query: 280 GSVSDYCSKKAKCPVLIVKRP 218
           GSVSD+C+K  KCPV++VKRP
Sbjct: 121 GSVSDHCAKHVKCPVVVVKRP 141


>ref|XP_002515296.1| conserved hypothetical protein [Ricinus communis]
           gi|223545776|gb|EEF47280.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 161

 Score =  189 bits (481), Expect = 6e-46
 Identities = 93/156 (59%), Positives = 120/156 (76%)
 Frame = -1

Query: 685 VKRRKIVVAVNESEESMYALSWCLTNIKIDLNSQYTLILLYIKPPPLVYSSLDITGYLFG 506
           +K RKI+VAV+ES+ESM ALSWCL N+ +  NS  TL+LLY+KPPP VYS+ D  GYLF 
Sbjct: 7   MKERKILVAVDESKESMTALSWCLKNL-VSPNSSSTLVLLYVKPPPPVYSAFDAAGYLFS 65

Query: 505 SDIIAAIEKYGKELADSVMGRAQVICNDYPNIIQIEKKVGCGDAKDKICEILEKLGADML 326
            D+I+A+EKY K+L +SVM RA+ +  +  + ++IE+ VG GDAKD IC  +EKL AD L
Sbjct: 66  GDVISAMEKYSKDLINSVMERAEAVYKNSISNVKIERVVGSGDAKDVICNSVEKLRADTL 125

Query: 325 VIGSHGYGSIKRALLGSVSDYCSKKAKCPVLIVKRP 218
           V+GSH YG +KR LLGSVSDYC++  KCPV+IVK P
Sbjct: 126 VMGSHDYGFLKRTLLGSVSDYCARHVKCPVVIVKHP 161


>ref|XP_002320308.1| predicted protein [Populus trichocarpa] gi|118487703|gb|ABK95676.1|
           unknown [Populus trichocarpa]
           gi|222861081|gb|EEE98623.1| predicted protein [Populus
           trichocarpa]
          Length = 164

 Score =  187 bits (476), Expect = 2e-45
 Identities = 87/152 (57%), Positives = 120/152 (78%)
 Frame = -1

Query: 673 KIVVAVNESEESMYALSWCLTNIKIDLNSQYTLILLYIKPPPLVYSSLDITGYLFGSDII 494
           KIVVAV+ESEESM+ALSWCL+N+ I  NS  TL+LLY+KPPP +YSS D+   +F +D+I
Sbjct: 11  KIVVAVDESEESMHALSWCLSNL-ISHNSTATLVLLYVKPPPAMYSSFDVAVQMFSTDVI 69

Query: 493 AAIEKYGKELADSVMGRAQVICNDYPNIIQIEKKVGCGDAKDKICEILEKLGADMLVIGS 314
            A+EKYG +L +SVM RA+ +  ++  I+ +E+ +G G+AKD IC  +EKL  D LV+GS
Sbjct: 70  TAVEKYGTDLVNSVMQRAETVYRNFNKIVNVERVIGSGEAKDVICNTVEKLKPDTLVMGS 129

Query: 313 HGYGSIKRALLGSVSDYCSKKAKCPVLIVKRP 218
           HGYG +++ALLGSVS++C+K+ KCPV+IVK P
Sbjct: 130 HGYGFLRKALLGSVSEHCAKRVKCPVVIVKHP 161


Top