BLASTX nr result

ID: Coptis21_contig00001910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001910
         (928 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518146.1| Pectate lyase precursor, putative [Ricinus c...   394   e-107
gb|ADD62392.1| pectase lyase [Prunus persica]                         389   e-106
emb|CBI33346.3| unnamed protein product [Vitis vinifera]              389   e-106
ref|XP_002285639.1| PREDICTED: probable pectate lyase 15 [Vitis ...   389   e-106
dbj|BAF43573.1| pectate lyase [Prunus persica]                        389   e-106

>ref|XP_002518146.1| Pectate lyase precursor, putative [Ricinus communis]
           gi|223542742|gb|EEF44279.1| Pectate lyase precursor,
           putative [Ricinus communis]
          Length = 376

 Score =  394 bits (1012), Expect = e-107
 Identities = 188/247 (76%), Positives = 206/247 (83%), Gaps = 1/247 (0%)
 Frame = +1

Query: 181 FSEYSR-VEETEELQGLKNSTMLVEQSSDVANAKNVHAVDDPDEIASEVEMTIRNSTERR 357
           FS + R + ETE L+   NS+M      ++   KN HAVDDP+E+ + VEM+IRNSTERR
Sbjct: 34  FSGFLRNIVETEHLESSNNSSMAAS-GEEIEEWKNEHAVDDPEEVVAMVEMSIRNSTERR 92

Query: 358 KLGFLSCGTGNPIDDCWRCDPKWQLNRKRLADCGIGFGRNAIGGRDGRFYXXXXXXXXXX 537
           KLG+ SCGTGNPIDDCWRCDP WQ NRKRLADCGIGFGRNAIGGRDGRFY          
Sbjct: 93  KLGYFSCGTGNPIDDCWRCDPNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDAGDDDP 152

Query: 538 XXXXXGTLRHAVIQDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGSNVHIANGACITIQ 717
                GTLRHAVIQDEPLWIVFKRDMVI LKQELIMNSFKTIDGRG+NVHIANGACITIQ
Sbjct: 153 VNPKPGTLRHAVIQDEPLWIVFKRDMVIQLKQELIMNSFKTIDGRGANVHIANGACITIQ 212

Query: 718 FITNVIIHGLHIHDCKPTGNALVRSSPSHFGWRTIADGDAVSIFGSSHIWVDHNSLSSCA 897
           F+TNVIIHGLHIHDCKPTGNA+VRSSPSH+GWRT+ADGDA+SIFGSSHIWVDHNSLS CA
Sbjct: 213 FVTNVIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWVDHNSLSHCA 272

Query: 898 DGLVDEI 918
           DGLVD +
Sbjct: 273 DGLVDAV 279


>gb|ADD62392.1| pectase lyase [Prunus persica]
          Length = 445

 Score =  389 bits (998), Expect = e-106
 Identities = 186/237 (78%), Positives = 200/237 (84%)
 Frame = +1

Query: 208 TEELQGLKNSTMLVEQSSDVANAKNVHAVDDPDEIASEVEMTIRNSTERRKLGFLSCGTG 387
           TEELQ   NS+M    + D   + N HAVDDP+E+ + V+M+IRNSTERRKLGF SCGTG
Sbjct: 38  TEELQSSSNSSMAARVAED-DESFNKHAVDDPEEVVAMVDMSIRNSTERRKLGFFSCGTG 96

Query: 388 NPIDDCWRCDPKWQLNRKRLADCGIGFGRNAIGGRDGRFYXXXXXXXXXXXXXXXGTLRH 567
           NPIDDCWRCD  WQ NRKRLADCGIGFGRNAIGGRDGRFY               GTLRH
Sbjct: 97  NPIDDCWRCDSNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVNPRPGTLRH 156

Query: 568 AVIQDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGSNVHIANGACITIQFITNVIIHGL 747
           AVIQ+EPLWIVFKRDMVI LKQELIMNSFKTIDGRG NVHIANGACITIQF+TN+IIHGL
Sbjct: 157 AVIQNEPLWIVFKRDMVIQLKQELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGL 216

Query: 748 HIHDCKPTGNALVRSSPSHFGWRTIADGDAVSIFGSSHIWVDHNSLSSCADGLVDEI 918
           HIHDCKPTGNALVRSSPSHFGWRT+ADGDAVSIFGSSHIWVDHNSLS+CADGLVD +
Sbjct: 217 HIHDCKPTGNALVRSSPSHFGWRTMADGDAVSIFGSSHIWVDHNSLSNCADGLVDAV 273


>emb|CBI33346.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  389 bits (998), Expect = e-106
 Identities = 186/237 (78%), Positives = 199/237 (83%)
 Frame = +1

Query: 208 TEELQGLKNSTMLVEQSSDVANAKNVHAVDDPDEIASEVEMTIRNSTERRKLGFLSCGTG 387
           TE+LQ   NS+M          A+N HAVDDPD +AS V+M+IRNSTERRKLG+ SCGTG
Sbjct: 31  TEQLQSSNNSSMA---------ARNEHAVDDPDAVASMVDMSIRNSTERRKLGYFSCGTG 81

Query: 388 NPIDDCWRCDPKWQLNRKRLADCGIGFGRNAIGGRDGRFYXXXXXXXXXXXXXXXGTLRH 567
           NPIDDCWRCD  WQ NRKRLADCGIGFGRNAIGGRDGRFY               GTLRH
Sbjct: 82  NPIDDCWRCDHNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVNPKPGTLRH 141

Query: 568 AVIQDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGSNVHIANGACITIQFITNVIIHGL 747
           AVIQD PLWIVFKRDMVITLKQELIMNSFKTIDGRG NVHIANGACIT+QF+TNVIIHGL
Sbjct: 142 AVIQDAPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACITVQFVTNVIIHGL 201

Query: 748 HIHDCKPTGNALVRSSPSHFGWRTIADGDAVSIFGSSHIWVDHNSLSSCADGLVDEI 918
           HIHDCKPTGNA+VRSSPSHFGWRT+ADGDA+SIFGSSHIWVDHNSLSSCADGLVD +
Sbjct: 202 HIHDCKPTGNAMVRSSPSHFGWRTMADGDAISIFGSSHIWVDHNSLSSCADGLVDAV 258


>ref|XP_002285639.1| PREDICTED: probable pectate lyase 15 [Vitis vinifera]
          Length = 432

 Score =  389 bits (998), Expect = e-106
 Identities = 186/237 (78%), Positives = 199/237 (83%)
 Frame = +1

Query: 208 TEELQGLKNSTMLVEQSSDVANAKNVHAVDDPDEIASEVEMTIRNSTERRKLGFLSCGTG 387
           TE+LQ   NS+M          A+N HAVDDPD +AS V+M+IRNSTERRKLG+ SCGTG
Sbjct: 33  TEQLQSSNNSSMA---------ARNEHAVDDPDAVASMVDMSIRNSTERRKLGYFSCGTG 83

Query: 388 NPIDDCWRCDPKWQLNRKRLADCGIGFGRNAIGGRDGRFYXXXXXXXXXXXXXXXGTLRH 567
           NPIDDCWRCD  WQ NRKRLADCGIGFGRNAIGGRDGRFY               GTLRH
Sbjct: 84  NPIDDCWRCDHNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVNPKPGTLRH 143

Query: 568 AVIQDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGSNVHIANGACITIQFITNVIIHGL 747
           AVIQD PLWIVFKRDMVITLKQELIMNSFKTIDGRG NVHIANGACIT+QF+TNVIIHGL
Sbjct: 144 AVIQDAPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACITVQFVTNVIIHGL 203

Query: 748 HIHDCKPTGNALVRSSPSHFGWRTIADGDAVSIFGSSHIWVDHNSLSSCADGLVDEI 918
           HIHDCKPTGNA+VRSSPSHFGWRT+ADGDA+SIFGSSHIWVDHNSLSSCADGLVD +
Sbjct: 204 HIHDCKPTGNAMVRSSPSHFGWRTMADGDAISIFGSSHIWVDHNSLSSCADGLVDAV 260


>dbj|BAF43573.1| pectate lyase [Prunus persica]
          Length = 425

 Score =  389 bits (998), Expect = e-106
 Identities = 186/237 (78%), Positives = 200/237 (84%)
 Frame = +1

Query: 208 TEELQGLKNSTMLVEQSSDVANAKNVHAVDDPDEIASEVEMTIRNSTERRKLGFLSCGTG 387
           TEELQ   NS+M    + D   + N HAVDDP+E+ + V+M+IRNSTERRKLGF SCGTG
Sbjct: 18  TEELQSSSNSSMAARVAED-DESFNKHAVDDPEEVVAMVDMSIRNSTERRKLGFFSCGTG 76

Query: 388 NPIDDCWRCDPKWQLNRKRLADCGIGFGRNAIGGRDGRFYXXXXXXXXXXXXXXXGTLRH 567
           NPIDDCWRCD  WQ NRKRLADCGIGFGRNAIGGRDGRFY               GTLRH
Sbjct: 77  NPIDDCWRCDSNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVNPRPGTLRH 136

Query: 568 AVIQDEPLWIVFKRDMVITLKQELIMNSFKTIDGRGSNVHIANGACITIQFITNVIIHGL 747
           AVIQ+EPLWIVFKRDMVI LKQELIMNSFKTIDGRG NVHIANGACITIQF+TN+IIHGL
Sbjct: 137 AVIQNEPLWIVFKRDMVIQLKQELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGL 196

Query: 748 HIHDCKPTGNALVRSSPSHFGWRTIADGDAVSIFGSSHIWVDHNSLSSCADGLVDEI 918
           HIHDCKPTGNALVRSSPSHFGWRT+ADGDAVSIFGSSHIWVDHNSLS+CADGLVD +
Sbjct: 197 HIHDCKPTGNALVRSSPSHFGWRTMADGDAVSIFGSSHIWVDHNSLSNCADGLVDAV 253


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