BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001908
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACG26318.1| h/ACA ribonucleoprotein complex subunit 3-like pr...    99   5e-19
ref|XP_004151989.1| PREDICTED: H/ACA ribonucleoprotein complex s...    97   1e-18
gb|AFK42431.1| unknown [Lotus japonicus]                               97   1e-18
gb|ACG47572.1| h/ACA ribonucleoprotein complex subunit 3-like pr...    96   2e-18
ref|NP_001147312.1| LOC100280920 [Zea mays] gi|195651999|gb|ACG4...    96   2e-18

>gb|ACG26318.1| h/ACA ribonucleoprotein complex subunit 3-like protein [Zea mays]
           gi|195609770|gb|ACG26715.1| h/ACA ribonucleoprotein
           complex subunit 3-like protein [Zea mays]
           gi|195609796|gb|ACG26728.1| h/ACA ribonucleoprotein
           complex subunit 3-like protein [Zea mays]
           gi|238011984|gb|ACR37027.1| unknown [Zea mays]
           gi|413937818|gb|AFW72369.1| nucleolar RNA-binding Nop10p
           family protein [Zea mays]
          Length = 64

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/50 (92%), Positives = 48/50 (96%)
 Frame = -3

Query: 379 YTTKKESPLGLATQSAHPARFSPDDKYSRQRIILKKRFGLLPTQKPALKY 230
           YTTKKESPLG+ TQSAHPARFSPDDKYSRQR +LKKRFGLLPTQKPALKY
Sbjct: 15  YTTKKESPLGVPTQSAHPARFSPDDKYSRQRYLLKKRFGLLPTQKPALKY 64


>ref|XP_004151989.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 3-like
           protein-like [Cucumis sativus]
           gi|449514990|ref|XP_004164533.1| PREDICTED: H/ACA
           ribonucleoprotein complex subunit 3-like protein-like
           [Cucumis sativus]
          Length = 64

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/50 (90%), Positives = 48/50 (96%)
 Frame = -3

Query: 379 YTTKKESPLGLATQSAHPARFSPDDKYSRQRIILKKRFGLLPTQKPALKY 230
           YTTKKESPLGLATQSAHPARFSPDDKYSRQR++LKKRFGLLPTQ+P  KY
Sbjct: 15  YTTKKESPLGLATQSAHPARFSPDDKYSRQRVLLKKRFGLLPTQQPPPKY 64


>gb|AFK42431.1| unknown [Lotus japonicus]
          Length = 64

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/50 (88%), Positives = 49/50 (98%)
 Frame = -3

Query: 379 YTTKKESPLGLATQSAHPARFSPDDKYSRQRIILKKRFGLLPTQKPALKY 230
           YTTKKESP+GLATQSAHPARFSPDDK+SRQR++LKKRFGLLPTQ+P LKY
Sbjct: 15  YTTKKESPVGLATQSAHPARFSPDDKFSRQRVLLKKRFGLLPTQQPPLKY 64


>gb|ACG47572.1| h/ACA ribonucleoprotein complex subunit 3-like protein [Zea mays]
          Length = 64

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/50 (90%), Positives = 47/50 (94%)
 Frame = -3

Query: 379 YTTKKESPLGLATQSAHPARFSPDDKYSRQRIILKKRFGLLPTQKPALKY 230
           YTTKKESPLG+ TQSAHPARFSPDDKYSRQ  +LKKRFGLLPTQKPALKY
Sbjct: 15  YTTKKESPLGVPTQSAHPARFSPDDKYSRQXYLLKKRFGLLPTQKPALKY 64


>ref|NP_001147312.1| LOC100280920 [Zea mays] gi|195651999|gb|ACG45467.1| h/ACA
           ribonucleoprotein complex subunit 3-like protein [Zea
           mays]
          Length = 64

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/50 (90%), Positives = 47/50 (94%)
 Frame = -3

Query: 379 YTTKKESPLGLATQSAHPARFSPDDKYSRQRIILKKRFGLLPTQKPALKY 230
           Y TKKESPLG+ TQSAHPARFSPDDKYSRQR +LKKRFGLLPTQKPALKY
Sbjct: 15  YXTKKESPLGVPTQSAHPARFSPDDKYSRQRYLLKKRFGLLPTQKPALKY 64