BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001906
         (1201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53176.1| JHL18I08.10 [Jatropha curcas]                         413   e-113
emb|CBI19782.3| unnamed protein product [Vitis vinifera]              406   e-111
ref|XP_004152667.1| PREDICTED: transcription initiation factor I...   404   e-110
ref|XP_002279990.2| PREDICTED: transcription initiation factor I...   404   e-110
ref|XP_002510468.1| Transcription initiation factor IIF subunit ...   404   e-110

>dbj|BAJ53176.1| JHL18I08.10 [Jatropha curcas]
          Length = 262

 Score =  413 bits (1062), Expect = e-113
 Identities = 203/260 (78%), Positives = 227/260 (87%), Gaps = 2/260 (0%)
 Frame = +2

Query: 50  MEEDRNGSSSSGSNLDTAKSDRSVWLMKTPLVVSKSWQAHAS--DPHPVGKVVLSIDPLR 223
           M+ED   + S+   L+TAK+DRSVWLMK PLVV+KSWQ+HAS  D HPV KVVLS+DPLR
Sbjct: 1   MDEDHGNNGSNSGVLETAKADRSVWLMKCPLVVAKSWQSHASSSDSHPVAKVVLSLDPLR 60

Query: 224 SSDDPSSVQFTMEMADTESGNMPKKYSLNMFKDFVPMGVFAEGNPGKIAVEGKVEHKFDM 403
           S DDPS++QFTMEMA  E GN+PK YSLNMFKDFVPM VF+E + G++A+EGKVEHKFDM
Sbjct: 61  S-DDPSALQFTMEMAGNEIGNIPKSYSLNMFKDFVPMCVFSETSQGRVAMEGKVEHKFDM 119

Query: 404 KPHNENIEAYGKLCRERTDKSKIKNRQIQMIDNDRGEHMRIRPGTVGLISSISKDKKKTA 583
           KPH ENIE YG+LCRERT+KS +KNRQIQ+IDNDRG HMR  PG +GL+SS SKDKKKTA
Sbjct: 120 KPHEENIEEYGRLCRERTNKSMVKNRQIQVIDNDRGVHMRPMPGMIGLMSSSSKDKKKTA 179

Query: 584 PVKASDMKRTRRDRGELEDIMFKLFERQPNWSLKKLVHETDQPEQFLKEILQELCVYNKR 763
           PVK SDMKRTRRDRGELEDIMFKLFERQPNW+LK+LV ETDQP QFLKEIL ELCVYNKR
Sbjct: 180 PVKQSDMKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKR 239

Query: 764 GTNQGTYELKPEYKKSVEDA 823
           GTNQGTYELKPEYKKS EDA
Sbjct: 240 GTNQGTYELKPEYKKSAEDA 259


>emb|CBI19782.3| unnamed protein product [Vitis vinifera]
          Length = 259

 Score =  406 bits (1043), Expect = e-111
 Identities = 203/258 (78%), Positives = 226/258 (87%), Gaps = 1/258 (0%)
 Frame = +2

Query: 50  MEEDRNGSSSSGSNLDTAKSDRSVWLMKTPLVVSKSWQAHAS-DPHPVGKVVLSIDPLRS 226
           MEE++  SSSS  NL+T K++RSVWLMK PL VSKSWQ+H+S +  PV KVVLS+DPLRS
Sbjct: 1   MEEEQGNSSSS--NLETGKAERSVWLMKCPLAVSKSWQSHSSSESQPVAKVVLSLDPLRS 58

Query: 227 SDDPSSVQFTMEMADTESGNMPKKYSLNMFKDFVPMGVFAEGNPGKIAVEGKVEHKFDMK 406
            +DPS+++FTMEM  T + NMPK YSLNMFKDFVPM VF+E N G++A+EGKVEHKFDMK
Sbjct: 59  -EDPSALEFTMEMTGTGAPNMPKSYSLNMFKDFVPMCVFSETNQGRVAMEGKVEHKFDMK 117

Query: 407 PHNENIEAYGKLCRERTDKSKIKNRQIQMIDNDRGEHMRIRPGTVGLISSISKDKKKTAP 586
           PHNENIE YGKLCRERT+KS IKNRQIQ+IDNDRG HMR  PG VGLI+S SKDKKKTAP
Sbjct: 118 PHNENIEEYGKLCRERTNKSMIKNRQIQVIDNDRGVHMRPMPGMVGLIASNSKDKKKTAP 177

Query: 587 VKASDMKRTRRDRGELEDIMFKLFERQPNWSLKKLVHETDQPEQFLKEILQELCVYNKRG 766
           VK SDMKRTRRDRGELEDIMFKLFERQPNW+LK+LV ETDQP QFLKEIL ELCVYNKRG
Sbjct: 178 VKGSDMKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRG 237

Query: 767 TNQGTYELKPEYKKSVED 820
           TNQGTYELKPEYKKS ED
Sbjct: 238 TNQGTYELKPEYKKSAED 255


>ref|XP_004152667.1| PREDICTED: transcription initiation factor IIF subunit beta-like
           [Cucumis sativus] gi|449520699|ref|XP_004167371.1|
           PREDICTED: transcription initiation factor IIF subunit
           beta-like [Cucumis sativus]
          Length = 260

 Score =  404 bits (1039), Expect = e-110
 Identities = 198/256 (77%), Positives = 225/256 (87%), Gaps = 1/256 (0%)
 Frame = +2

Query: 56  EDRNGSSSSGSNLDTAKSDRSVWLMKTPLVVSKSWQAHA-SDPHPVGKVVLSIDPLRSSD 232
           ED +GS  S SNLDT K+DRSVWLMK PL+V+KSWQAH  SD  P+ KV+LS+DPL+S D
Sbjct: 2   EDEHGSGGSSSNLDTGKADRSVWLMKCPLLVAKSWQAHPPSDSLPLAKVILSLDPLQS-D 60

Query: 233 DPSSVQFTMEMADTESGNMPKKYSLNMFKDFVPMGVFAEGNPGKIAVEGKVEHKFDMKPH 412
           + SS+QF MEMA TE+GN+PK +SLNMFKDFVPM VF+E + GK+++EGKVEHKFDMKPH
Sbjct: 61  ESSSLQFKMEMAGTETGNVPKSFSLNMFKDFVPMCVFSEASQGKVSMEGKVEHKFDMKPH 120

Query: 413 NENIEAYGKLCRERTDKSKIKNRQIQMIDNDRGEHMRIRPGTVGLISSISKDKKKTAPVK 592
           +EN+E YGKLCRERT+KS +KNRQIQ+IDNDRG HMR  PG VGLISS SK+KKK APVK
Sbjct: 121 SENLEMYGKLCRERTNKSMVKNRQIQVIDNDRGVHMRPMPGMVGLISSTSKEKKKVAPVK 180

Query: 593 ASDMKRTRRDRGELEDIMFKLFERQPNWSLKKLVHETDQPEQFLKEILQELCVYNKRGTN 772
            SD+KRTRRDRGELEDIMFKLFERQPNW+LK+LV ETDQP QFLKEIL ELCVYNKRGTN
Sbjct: 181 QSDVKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRGTN 240

Query: 773 QGTYELKPEYKKSVED 820
           QGTYELKPEYKKSVED
Sbjct: 241 QGTYELKPEYKKSVED 256


>ref|XP_002279990.2| PREDICTED: transcription initiation factor IIF subunit beta [Vitis
           vinifera]
          Length = 260

 Score =  404 bits (1038), Expect = e-110
 Identities = 202/258 (78%), Positives = 222/258 (86%), Gaps = 1/258 (0%)
 Frame = +2

Query: 50  MEEDRNGSSSSGSNLDTAKSDRSVWLMKTPLVVSKSWQAHAS-DPHPVGKVVLSIDPLRS 226
           MEE++  SSSS  NL+T K++RSVWLMK PL VSKSWQ+H+S +  PV KVVLS+DPLRS
Sbjct: 1   MEEEQGNSSSS--NLETGKAERSVWLMKCPLAVSKSWQSHSSSESQPVAKVVLSLDPLRS 58

Query: 227 SDDPSSVQFTMEMADTESGNMPKKYSLNMFKDFVPMGVFAEGNPGKIAVEGKVEHKFDMK 406
            D  +  QFTMEM  T + NMPK YSLNMFKDFVPM VF+E N G++A+EGKVEHKFDMK
Sbjct: 59  EDPSALEQFTMEMTGTGAPNMPKSYSLNMFKDFVPMCVFSETNQGRVAMEGKVEHKFDMK 118

Query: 407 PHNENIEAYGKLCRERTDKSKIKNRQIQMIDNDRGEHMRIRPGTVGLISSISKDKKKTAP 586
           PHNENIE YGKLCRERT+KS IKNRQIQ+IDNDRG HMR  PG VGLI+S SKDKKKTAP
Sbjct: 119 PHNENIEEYGKLCRERTNKSMIKNRQIQVIDNDRGVHMRPMPGMVGLIASNSKDKKKTAP 178

Query: 587 VKASDMKRTRRDRGELEDIMFKLFERQPNWSLKKLVHETDQPEQFLKEILQELCVYNKRG 766
           VK SDMKRTRRDRGELEDIMFKLFERQPNW+LK+LV ETDQP QFLKEIL ELCVYNKRG
Sbjct: 179 VKGSDMKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKRG 238

Query: 767 TNQGTYELKPEYKKSVED 820
           TNQGTYELKPEYKKS ED
Sbjct: 239 TNQGTYELKPEYKKSAED 256


>ref|XP_002510468.1| Transcription initiation factor IIF subunit beta, putative [Ricinus
           communis] gi|223551169|gb|EEF52655.1| Transcription
           initiation factor IIF subunit beta, putative [Ricinus
           communis]
          Length = 257

 Score =  404 bits (1038), Expect = e-110
 Identities = 202/259 (77%), Positives = 223/259 (86%), Gaps = 2/259 (0%)
 Frame = +2

Query: 50  MEEDRNGSSSSGSNLDTAKSDRSVWLMKTPLVVSKSWQAHAS--DPHPVGKVVLSIDPLR 223
           M+ED   SS     L+TAK+DRSVWLMK PLVV++SW++HAS  D HPV KVVLS+DPLR
Sbjct: 1   MDEDHGSSSGI---LETAKADRSVWLMKCPLVVARSWKSHASSSDSHPVAKVVLSLDPLR 57

Query: 224 SSDDPSSVQFTMEMADTESGNMPKKYSLNMFKDFVPMGVFAEGNPGKIAVEGKVEHKFDM 403
           S D   S+QFTMEMA TE+GN+PK YSLNMFKDFVPM VF+E   G++A+EGKVEHKFDM
Sbjct: 58  SDD---SLQFTMEMAGTENGNVPKSYSLNMFKDFVPMSVFSETTQGRVAIEGKVEHKFDM 114

Query: 404 KPHNENIEAYGKLCRERTDKSKIKNRQIQMIDNDRGEHMRIRPGTVGLISSISKDKKKTA 583
           KPH EN+E YG+LCRERT+KS IKNRQIQ+IDNDRG HMR  PG VGLISS SKDKKKTA
Sbjct: 115 KPHEENMEEYGRLCRERTNKSMIKNRQIQVIDNDRGVHMRPMPGMVGLISSSSKDKKKTA 174

Query: 584 PVKASDMKRTRRDRGELEDIMFKLFERQPNWSLKKLVHETDQPEQFLKEILQELCVYNKR 763
           PVK SDMKRTRRDRGELEDIMFKLFERQPNW+LK+LV ETDQP QFLKEIL ELCVYNKR
Sbjct: 175 PVKQSDMKRTRRDRGELEDIMFKLFERQPNWALKQLVQETDQPAQFLKEILNELCVYNKR 234

Query: 764 GTNQGTYELKPEYKKSVED 820
           GTNQGTYELKPEYKKS ED
Sbjct: 235 GTNQGTYELKPEYKKSAED 253