BLASTX nr result
ID: Coptis21_contig00001904
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00001904
(1475 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265256.2| PREDICTED: nucleolar GTP-binding protein 1-l... 512 e-143
emb|CBI39064.3| unnamed protein product [Vitis vinifera] 512 e-143
ref|XP_002526509.1| nucleolar GTP-binding protein, putative [Ric... 483 e-134
ref|XP_004164807.1| PREDICTED: nucleolar GTP-binding protein 1-l... 469 e-130
ref|XP_004133958.1| PREDICTED: nucleolar GTP-binding protein 1-l... 469 e-129
>ref|XP_002265256.2| PREDICTED: nucleolar GTP-binding protein 1-like [Vitis vinifera]
Length = 445
Score = 512 bits (1319), Expect = e-143
Identities = 270/443 (60%), Positives = 325/443 (73%), Gaps = 17/443 (3%)
Frame = +2
Query: 35 LWHIPSNKLSLMRTS-------------IMQPVMLSRKLQTSTYEIVKGSYVPLTRAKTE 175
LWHIPS KL L+R+S I + +K+QT+ Y IV GSYVP+ + K +
Sbjct: 10 LWHIPSTKL-LLRSSNFSKGSYLVPAAEIYPTKIFCKKIQTTAYRIVNGSYVPVPQNKNQ 68
Query: 176 TANQE----TMETVGAFQRLPMVKPPLDILYSALRKAKKVPASKGISNIAKRERNRGAKQ 343
+ ++ T+ETVGAFQ+LPMV P +DILYSALRKAK+V +KGI+NIAKRERNR AKQ
Sbjct: 69 SNKEDIASTTLETVGAFQKLPMVMPSVDILYSALRKAKRVSPTKGIANIAKRERNRAAKQ 128
Query: 344 LDALMKELAIPLREYMDNFPNKKHLHPYERSLIELTLGDGNYXXXXXXXXXXXXXXXXXX 523
LD LMKELA+PLR Y +NFP+KK LHPYE+SLI+LTLGDGNY
Sbjct: 129 LDFLMKELAVPLRGYAENFPDKKQLHPYEQSLIQLTLGDGNYEQVLRRVDSLRKKVVSVG 188
Query: 524 XXQASLCAKCLTKRDAEERLNEGIKKLEEIFNREGKAVDDLLNIAKTLRAVPVVDLDTPT 703
ASLCAK LTKR+AEERL EG+KKLE+IFN EGKAVDDLLNIAKTLRA+PVVDL+TPT
Sbjct: 189 KEHASLCAKSLTKREAEERLGEGMKKLEDIFNHEGKAVDDLLNIAKTLRAMPVVDLETPT 248
Query: 704 LCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHISVNYQRFQVTDTPGLLKRFD 883
LCLVGAPNVGKSSLVR+LSTGKPEVCNYPFTTRGILMGHI+ NY+ FQVTDTPGLL R D
Sbjct: 249 LCLVGAPNVGKSSLVRVLSTGKPEVCNYPFTTRGILMGHIAFNYRHFQVTDTPGLLNRHD 308
Query: 884 DARNNLEKLTLAVLTHLPTAVLYVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERF 1063
D RNNLEKLTLAVL+HLPTA+LYVH ERF
Sbjct: 309 DERNNLEKLTLAVLSHLPTAILYVH-----------DLSGECGTSPSDQFFIYKEIRERF 357
Query: 1064 SNHLWIDVVSKCDLLQAAPVHFITEDGEEDDLEMARYRKAGPDGAIPVSVKSEVGLDELK 1243
S+HLWIDVVSKCDLLQ +P+ F TED D+ E+ARY+K GP+GAI VSVK+E L++LK
Sbjct: 358 SDHLWIDVVSKCDLLQESPIIFNTEDVSADNPELARYQKMGPEGAIHVSVKNEAALNQLK 417
Query: 1244 SKVHAMLLSQLAKLESEKAIQES 1312
+VH +L+SQ+++++S ++ +E+
Sbjct: 418 GRVHELLVSQMSRIKSSESNEEN 440
>emb|CBI39064.3| unnamed protein product [Vitis vinifera]
Length = 456
Score = 512 bits (1319), Expect = e-143
Identities = 270/443 (60%), Positives = 325/443 (73%), Gaps = 17/443 (3%)
Frame = +2
Query: 35 LWHIPSNKLSLMRTS-------------IMQPVMLSRKLQTSTYEIVKGSYVPLTRAKTE 175
LWHIPS KL L+R+S I + +K+QT+ Y IV GSYVP+ + K +
Sbjct: 10 LWHIPSTKL-LLRSSNFSKGSYLVPAAEIYPTKIFCKKIQTTAYRIVNGSYVPVPQNKNQ 68
Query: 176 TANQE----TMETVGAFQRLPMVKPPLDILYSALRKAKKVPASKGISNIAKRERNRGAKQ 343
+ ++ T+ETVGAFQ+LPMV P +DILYSALRKAK+V +KGI+NIAKRERNR AKQ
Sbjct: 69 SNKEDIASTTLETVGAFQKLPMVMPSVDILYSALRKAKRVSPTKGIANIAKRERNRAAKQ 128
Query: 344 LDALMKELAIPLREYMDNFPNKKHLHPYERSLIELTLGDGNYXXXXXXXXXXXXXXXXXX 523
LD LMKELA+PLR Y +NFP+KK LHPYE+SLI+LTLGDGNY
Sbjct: 129 LDFLMKELAVPLRGYAENFPDKKQLHPYEQSLIQLTLGDGNYEQVLRRVDSLRKKVVSVG 188
Query: 524 XXQASLCAKCLTKRDAEERLNEGIKKLEEIFNREGKAVDDLLNIAKTLRAVPVVDLDTPT 703
ASLCAK LTKR+AEERL EG+KKLE+IFN EGKAVDDLLNIAKTLRA+PVVDL+TPT
Sbjct: 189 KEHASLCAKSLTKREAEERLGEGMKKLEDIFNHEGKAVDDLLNIAKTLRAMPVVDLETPT 248
Query: 704 LCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRGILMGHISVNYQRFQVTDTPGLLKRFD 883
LCLVGAPNVGKSSLVR+LSTGKPEVCNYPFTTRGILMGHI+ NY+ FQVTDTPGLL R D
Sbjct: 249 LCLVGAPNVGKSSLVRVLSTGKPEVCNYPFTTRGILMGHIAFNYRHFQVTDTPGLLNRHD 308
Query: 884 DARNNLEKLTLAVLTHLPTAVLYVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERF 1063
D RNNLEKLTLAVL+HLPTA+LYVH ERF
Sbjct: 309 DERNNLEKLTLAVLSHLPTAILYVH-----------DLSGECGTSPSDQFFIYKEIRERF 357
Query: 1064 SNHLWIDVVSKCDLLQAAPVHFITEDGEEDDLEMARYRKAGPDGAIPVSVKSEVGLDELK 1243
S+HLWIDVVSKCDLLQ +P+ F TED D+ E+ARY+K GP+GAI VSVK+E L++LK
Sbjct: 358 SDHLWIDVVSKCDLLQESPIIFNTEDVSADNPELARYQKMGPEGAIHVSVKNEAALNQLK 417
Query: 1244 SKVHAMLLSQLAKLESEKAIQES 1312
+VH +L+SQ+++++S ++ +E+
Sbjct: 418 GRVHELLVSQMSRIKSSESNEEN 440
>ref|XP_002526509.1| nucleolar GTP-binding protein, putative [Ricinus communis]
gi|223534184|gb|EEF35900.1| nucleolar GTP-binding
protein, putative [Ricinus communis]
Length = 443
Score = 483 bits (1242), Expect = e-134
Identities = 255/412 (61%), Positives = 300/412 (72%), Gaps = 5/412 (1%)
Frame = +2
Query: 71 RTSIMQPVMLSRKLQTSTYEIVKGSYVPL-----TRAKTETANQETMETVGAFQRLPMVK 235
R S + SR QT TYEIV SYVP+ TR+ T + ++ +GAFQ+LPMV
Sbjct: 35 RVSQCPNLCFSRHTQTITYEIVNASYVPIHQTKPTRSYTTDKSPGNLQNLGAFQKLPMVM 94
Query: 236 PPLDILYSALRKAKKVPASKGISNIAKRERNRGAKQLDALMKELAIPLREYMDNFPNKKH 415
P +DILYSALRKAK+V +KGI+NIAKRERNRGAKQLDALMKELA+PLREY++NFP +K+
Sbjct: 95 PSVDILYSALRKAKRVSPTKGIANIAKRERNRGAKQLDALMKELALPLREYLENFPKRKY 154
Query: 416 LHPYERSLIELTLGDGNYXXXXXXXXXXXXXXXXXXXXQASLCAKCLTKRDAEERLNEGI 595
LHPYE+SLIELTLGDGNY AS+CAK LTKR+AEE+LNEG
Sbjct: 155 LHPYEQSLIELTLGDGNYEEVLRKVDALRKKVVSIGKEHASVCAKSLTKREAEEQLNEGR 214
Query: 596 KKLEEIFNREGKAVDDLLNIAKTLRAVPVVDLDTPTLCLVGAPNVGKSSLVRILSTGKPE 775
+KLEEIF EGKAVDDLLNIAKTLRA+PVV+L+TPTLCLVGAPNVGKSSLVRILSTGKPE
Sbjct: 215 EKLEEIFKCEGKAVDDLLNIAKTLRAMPVVNLETPTLCLVGAPNVGKSSLVRILSTGKPE 274
Query: 776 VCNYPFTTRGILMGHISVNYQRFQVTDTPGLLKRFDDARNNLEKLTLAVLTHLPTAVLYV 955
VCNYPFTTRGILMGHI+ ++Q FQVTDTPGLLKR D+ RNNLEKLTLAVLTHLPTA+LYV
Sbjct: 275 VCNYPFTTRGILMGHIAFDFQHFQVTDTPGLLKRCDEDRNNLEKLTLAVLTHLPTAILYV 334
Query: 956 HXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERFSNHLWIDVVSKCDLLQAAPVHFIT 1135
H ERFS+HLW+DVVSKCDLLQ + + F
Sbjct: 335 H-----------DLTGECGTSASDQFVIYKEIKERFSDHLWLDVVSKCDLLQESSMIFNA 383
Query: 1136 EDGEEDDLEMARYRKAGPDGAIPVSVKSEVGLDELKSKVHAMLLSQLAKLES 1291
+D D EM RY K GP+GAI VS+KS GL+ELK +V +L+ Q+ +++S
Sbjct: 384 KDNNNDHFEMVRYHKVGPNGAIRVSIKSGEGLNELKGRVQNLLVGQMERIKS 435
>ref|XP_004164807.1| PREDICTED: nucleolar GTP-binding protein 1-like [Cucumis sativus]
Length = 444
Score = 469 bits (1208), Expect = e-130
Identities = 240/409 (58%), Positives = 300/409 (73%), Gaps = 6/409 (1%)
Frame = +2
Query: 104 RKLQTSTYEIVKGSYVPLTR------AKTETANQETMETVGAFQRLPMVKPPLDILYSAL 265
R +QT TY +V+GSY+P T AK + +++E +GAFQ+LPMV P +DIL+SAL
Sbjct: 47 RSIQTETYNVVRGSYIPKTETKDQNEAKKKDEPSKSLENMGAFQKLPMVMPSIDILHSAL 106
Query: 266 RKAKKVPASKGISNIAKRERNRGAKQLDALMKELAIPLREYMDNFPNKKHLHPYERSLIE 445
+ AK+V +KGI+NIAKRERNRGAKQLD LMKELA+ LR Y++ FP K++LHPYE SLIE
Sbjct: 107 KTAKRVSPTKGIANIAKRERNRGAKQLDTLMKELAVRLRTYLEEFPKKEYLHPYECSLIE 166
Query: 446 LTLGDGNYXXXXXXXXXXXXXXXXXXXXQASLCAKCLTKRDAEERLNEGIKKLEEIFNRE 625
LTLGDG Y ASLCAK +KRDAEE L+ G+KK+EE + +
Sbjct: 167 LTLGDGKYEQVLRKVDTLRKKVVSTGKEYASLCAKSASKRDAEESLSVGMKKVEEAYIHQ 226
Query: 626 GKAVDDLLNIAKTLRAVPVVDLDTPTLCLVGAPNVGKSSLVRILSTGKPEVCNYPFTTRG 805
KAVDDLL+IAKTLRA+PVVDLD PTLCLVGAPNVGKSSLVRILSTGKPE+CNYPFTTRG
Sbjct: 227 AKAVDDLLHIAKTLRAMPVVDLDKPTLCLVGAPNVGKSSLVRILSTGKPEICNYPFTTRG 286
Query: 806 ILMGHISVNYQRFQVTDTPGLLKRFDDARNNLEKLTLAVLTHLPTAVLYVHXXXXXXXXX 985
ILMGHI +NYQ FQVTDTPGLL+R DD RNNLEKLTLAVL+HLPTAVL+VH
Sbjct: 287 ILMGHIVLNYQHFQVTDTPGLLRRSDDDRNNLEKLTLAVLSHLPTAVLFVH--------- 337
Query: 986 XXXXXXXXXXXXXXXXXXXXXXXERFSNHLWIDVVSKCDLLQAAPVHFITEDGEEDDLEM 1165
ER+ +HLW++VVSKCDLL+ +PV F TE+ + DD+E+
Sbjct: 338 --DLSGECGTSPSDQFAIYKEMKERYGSHLWLNVVSKCDLLKESPVTFSTENCDHDDIEL 395
Query: 1166 ARYRKAGPDGAIPVSVKSEVGLDELKSKVHAMLLSQLAKLESEKAIQES 1312
+YR+ GPDGA+ VSVK+++GL+ELK +VH ML+SQ+ +++ +KA +E+
Sbjct: 396 QKYRRFGPDGALLVSVKNDIGLNELKERVHEMLVSQMTRIKEQKATEET 444
>ref|XP_004133958.1| PREDICTED: nucleolar GTP-binding protein 1-like [Cucumis sativus]
Length = 444
Score = 469 bits (1206), Expect = e-129
Identities = 243/427 (56%), Positives = 307/427 (71%), Gaps = 7/427 (1%)
Frame = +2
Query: 53 NKLSLMRTSIMQPVM-LSRKLQTSTYEIVKGSYVPLTR------AKTETANQETMETVGA 211
N + + R+S + P R +QT TY +V+GSY+P T AK + +++E +GA
Sbjct: 29 NGMHVSRSSRIYPNQCFCRSIQTETYNVVRGSYIPKTETKDQNEAKKKDEPSKSLENMGA 88
Query: 212 FQRLPMVKPPLDILYSALRKAKKVPASKGISNIAKRERNRGAKQLDALMKELAIPLREYM 391
FQ+LPMV P +DIL+SAL+ AK+V +KGI+NIAKRERNRGAKQLD LMKELA+ LR Y+
Sbjct: 89 FQKLPMVMPSIDILHSALKTAKRVSPTKGIANIAKRERNRGAKQLDTLMKELAVRLRTYL 148
Query: 392 DNFPNKKHLHPYERSLIELTLGDGNYXXXXXXXXXXXXXXXXXXXXQASLCAKCLTKRDA 571
+ FP K++LHPYE SLIELTLGDG Y ASLCAK +KRDA
Sbjct: 149 EEFPKKEYLHPYECSLIELTLGDGKYEQVLRKVDTLRKKVVSTGKEYASLCAKSASKRDA 208
Query: 572 EERLNEGIKKLEEIFNREGKAVDDLLNIAKTLRAVPVVDLDTPTLCLVGAPNVGKSSLVR 751
EE L+ G+KK+EE + + KAVDDLL+IAKTLRA+PVVDLD PTLCLVGAPNVGKSSLVR
Sbjct: 209 EESLSVGMKKVEEAYIHQAKAVDDLLHIAKTLRAMPVVDLDKPTLCLVGAPNVGKSSLVR 268
Query: 752 ILSTGKPEVCNYPFTTRGILMGHISVNYQRFQVTDTPGLLKRFDDARNNLEKLTLAVLTH 931
ILSTGKPE+CNYPFTTRGILMGH +NYQ FQVTDTPGLL+R DD RNNLEKLTLAVL+H
Sbjct: 269 ILSTGKPEICNYPFTTRGILMGHTVLNYQHFQVTDTPGLLRRSDDDRNNLEKLTLAVLSH 328
Query: 932 LPTAVLYVHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERFSNHLWIDVVSKCDLLQ 1111
LPTAVL+VH ER+ +HLW++VVSKCDLL+
Sbjct: 329 LPTAVLFVH-----------DLSGECGTSPSDQFAIYKEMKERYGSHLWLNVVSKCDLLK 377
Query: 1112 AAPVHFITEDGEEDDLEMARYRKAGPDGAIPVSVKSEVGLDELKSKVHAMLLSQLAKLES 1291
+PV F TE+ + DD+E+ +YR+ GPDGA+ VSVK+++GL+ELK +VH ML+SQ+ +++
Sbjct: 378 ESPVTFSTENCDHDDIELQKYRRFGPDGALLVSVKNDIGLNELKERVHEMLVSQMTRIKE 437
Query: 1292 EKAIQES 1312
+KA +E+
Sbjct: 438 QKATEET 444