BLASTX nr result

ID: Coptis21_contig00001903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001903
         (1300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276186.1| PREDICTED: uncharacterized protein LOC100259...   572   e-161
ref|XP_002516481.1| 3'-5' exonuclease, putative [Ricinus communi...   556   e-156
emb|CBI35995.3| unnamed protein product [Vitis vinifera]              550   e-154
ref|XP_002281479.1| PREDICTED: uncharacterized protein LOC100263...   550   e-154
ref|XP_004142915.1| PREDICTED: uncharacterized protein LOC101214...   542   e-152

>ref|XP_002276186.1| PREDICTED: uncharacterized protein LOC100259526 [Vitis vinifera]
            gi|147856945|emb|CAN82846.1| hypothetical protein
            VITISV_007988 [Vitis vinifera]
            gi|296081603|emb|CBI20608.3| unnamed protein product
            [Vitis vinifera]
          Length = 341

 Score =  572 bits (1474), Expect = e-161
 Identities = 283/322 (87%), Positives = 296/322 (91%)
 Frame = -2

Query: 1191 GKHPDPDAQLSKVPIHIVTHASQLPSEFLKPSPERHLVIGFDCEGVDLCRHGTLCIMQLA 1012
            GK  D +  L  VPIHIVT  SQLP EFL+PSPER LVIGFDCEGVDLCRHGTLCIMQ+A
Sbjct: 20   GKPIDHEGLLPLVPIHIVTLPSQLPIEFLEPSPERKLVIGFDCEGVDLCRHGTLCIMQIA 79

Query: 1011 FPDGIYLVDVIQGGMMLMKACKPALESSYITKVIHDCKRDSEALYFQFGIKLHNVVDTQI 832
            FPD IYLVD IQGG MLMKACKPALESSYITKVIHDCKRDSEALYFQFGIKLHNVVDTQI
Sbjct: 80   FPDAIYLVDAIQGGEMLMKACKPALESSYITKVIHDCKRDSEALYFQFGIKLHNVVDTQI 139

Query: 831  AYSLIEEQEGRTRSPDDYISFVGLLADPRYCGVPYLEKQEVRVLLRQDPGYWTYRPLSEQ 652
            AYSLIEEQEGR R  DDYISFVGLLADPRYCGV YLEKQEVR LLRQ+P +WT+RPLS+ 
Sbjct: 140  AYSLIEEQEGRKRLVDDYISFVGLLADPRYCGVSYLEKQEVRDLLRQNPDFWTHRPLSDL 199

Query: 651  MVRAAADDVCFLLYIYHKMMEKLNERSLWHLAVRGALYSRCFCINDNEYADWPPVPPVPD 472
            MVRAAADDV FLLYIYHKMMEKLNERSLW+LAVRGALY RCFCINDN+YADWPP+PP+PD
Sbjct: 200  MVRAAADDVRFLLYIYHKMMEKLNERSLWYLAVRGALYCRCFCINDNDYADWPPLPPIPD 259

Query: 471  NLIVEGNAPEEEILSVLNVPHGKMGCVIGRRGASILSVKESCNAEILIGGAKGPPDKVFI 292
            NLIVEGNAPEEEILSVL+VP GKMG VIGRRGASILSVKESCNAEILIGGAKGPPDKVFI
Sbjct: 260  NLIVEGNAPEEEILSVLHVPPGKMGRVIGRRGASILSVKESCNAEILIGGAKGPPDKVFI 319

Query: 291  IGPVKQVRKAEAILRGKMLETY 226
            IGPVKQVRKAEAILRG+MLE Y
Sbjct: 320  IGPVKQVRKAEAILRGRMLEMY 341


>ref|XP_002516481.1| 3'-5' exonuclease, putative [Ricinus communis]
            gi|223544301|gb|EEF45822.1| 3'-5' exonuclease, putative
            [Ricinus communis]
          Length = 342

 Score =  556 bits (1433), Expect = e-156
 Identities = 268/342 (78%), Positives = 297/342 (86%)
 Frame = -2

Query: 1251 MADMAADGSPELDGDDDISDGKHPDPDAQLSKVPIHIVTHASQLPSEFLKPSPERHLVIG 1072
            MA  ++     +    D    K  D +AQLS VPIH+VT ASQLP+EFL P+P++ L+IG
Sbjct: 1    MAASSSSHQTHIPLPSDSGGNKPLDHEAQLSLVPIHVVTDASQLPAEFLNPTPDKQLIIG 60

Query: 1071 FDCEGVDLCRHGTLCIMQLAFPDGIYLVDVIQGGMMLMKACKPALESSYITKVIHDCKRD 892
            FDCEGVDLCRHGTLCIMQ+AFPD I+LVD  QGG ML+KACKPALESSYITKVIHDCKRD
Sbjct: 61   FDCEGVDLCRHGTLCIMQIAFPDAIFLVDATQGGEMLLKACKPALESSYITKVIHDCKRD 120

Query: 891  SEALYFQFGIKLHNVVDTQIAYSLIEEQEGRTRSPDDYISFVGLLADPRYCGVPYLEKQE 712
            SEALYFQFGIKLHNV DTQIAYSLIEEQEGRT+ PDDYISFVGLLADPRYCG+ YLEK+E
Sbjct: 121  SEALYFQFGIKLHNVFDTQIAYSLIEEQEGRTKLPDDYISFVGLLADPRYCGISYLEKEE 180

Query: 711  VRVLLRQDPGYWTYRPLSEQMVRAAADDVCFLLYIYHKMMEKLNERSLWHLAVRGALYSR 532
            VR+LLRQD  +WTYRPLSE M+RAAADDV FLLYIYHKM++KLN+RSLW+LAVR ALY R
Sbjct: 181  VRLLLRQDSNFWTYRPLSELMIRAAADDVRFLLYIYHKMIKKLNQRSLWYLAVRSALYCR 240

Query: 531  CFCINDNEYADWPPVPPVPDNLIVEGNAPEEEILSVLNVPHGKMGCVIGRRGASILSVKE 352
            CFC NDN YADWP +PP+P NL+ +GNAPEEEILSVL VP GKMG VIGRRGASILS+KE
Sbjct: 241  CFCTNDNNYADWPSIPPIPGNLVGDGNAPEEEILSVLGVPPGKMGRVIGRRGASILSIKE 300

Query: 351  SCNAEILIGGAKGPPDKVFIIGPVKQVRKAEAILRGKMLETY 226
            SCNAEI IGG+KGPPDKVFIIGPVKQVRKAEAILRGKMLE Y
Sbjct: 301  SCNAEIFIGGSKGPPDKVFIIGPVKQVRKAEAILRGKMLEIY 342


>emb|CBI35995.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  550 bits (1417), Expect = e-154
 Identities = 265/320 (82%), Positives = 290/320 (90%)
 Frame = -2

Query: 1197 SDGKHPDPDAQLSKVPIHIVTHASQLPSEFLKPSPERHLVIGFDCEGVDLCRHGTLCIMQ 1018
            S G+HPD  A LS VPI+IVTHASQLP +FL PSP R LVIGFDCEGVDLCRHG+LCIMQ
Sbjct: 48   SGGQHPDHAALLSLVPIYIVTHASQLPKDFLVPSPVRQLVIGFDCEGVDLCRHGSLCIMQ 107

Query: 1017 LAFPDGIYLVDVIQGGMMLMKACKPALESSYITKVIHDCKRDSEALYFQFGIKLHNVVDT 838
            LAFPD IYLVD IQGG  LMKACKPALESSYITKVIHDCKRDSEALYFQFGIKLHNVVD+
Sbjct: 108  LAFPDAIYLVDAIQGGEKLMKACKPALESSYITKVIHDCKRDSEALYFQFGIKLHNVVDS 167

Query: 837  QIAYSLIEEQEGRTRSPDDYISFVGLLADPRYCGVPYLEKQEVRVLLRQDPGYWTYRPLS 658
            QIAYSLIEEQ+GR RSPDDYISFVGLLADPRYCG+ YLEK+EVRVLL+QDP +WTYRPLS
Sbjct: 168  QIAYSLIEEQQGRRRSPDDYISFVGLLADPRYCGISYLEKKEVRVLLKQDPKFWTYRPLS 227

Query: 657  EQMVRAAADDVCFLLYIYHKMMEKLNERSLWHLAVRGALYSRCFCINDNEYADWPPVPPV 478
            E MVRAAADDV FL YIY+KMME+LNE SLW LAVRGALY RCFC+NDNEYADWP +P +
Sbjct: 228  ELMVRAAADDVRFLPYIYYKMMEELNEHSLWKLAVRGALYCRCFCVNDNEYADWPSLPNM 287

Query: 477  PDNLIVEGNAPEEEILSVLNVPHGKMGCVIGRRGASILSVKESCNAEILIGGAKGPPDKV 298
            P+NL+V+G APEEEILSVL +P GKMGCVIGR+GASILS+K+ C AEILIGGAKGPPD V
Sbjct: 288  PENLMVDGKAPEEEILSVLEIPQGKMGCVIGRKGASILSIKQCCKAEILIGGAKGPPDMV 347

Query: 297  FIIGPVKQVRKAEAILRGKM 238
            FIIGPVK+VRKAEAILRG++
Sbjct: 348  FIIGPVKEVRKAEAILRGRI 367


>ref|XP_002281479.1| PREDICTED: uncharacterized protein LOC100263418 [Vitis vinifera]
          Length = 336

 Score =  550 bits (1417), Expect = e-154
 Identities = 265/320 (82%), Positives = 290/320 (90%)
 Frame = -2

Query: 1197 SDGKHPDPDAQLSKVPIHIVTHASQLPSEFLKPSPERHLVIGFDCEGVDLCRHGTLCIMQ 1018
            S G+HPD  A LS VPI+IVTHASQLP +FL PSP R LVIGFDCEGVDLCRHG+LCIMQ
Sbjct: 17   SGGQHPDHAALLSLVPIYIVTHASQLPKDFLVPSPVRQLVIGFDCEGVDLCRHGSLCIMQ 76

Query: 1017 LAFPDGIYLVDVIQGGMMLMKACKPALESSYITKVIHDCKRDSEALYFQFGIKLHNVVDT 838
            LAFPD IYLVD IQGG  LMKACKPALESSYITKVIHDCKRDSEALYFQFGIKLHNVVD+
Sbjct: 77   LAFPDAIYLVDAIQGGEKLMKACKPALESSYITKVIHDCKRDSEALYFQFGIKLHNVVDS 136

Query: 837  QIAYSLIEEQEGRTRSPDDYISFVGLLADPRYCGVPYLEKQEVRVLLRQDPGYWTYRPLS 658
            QIAYSLIEEQ+GR RSPDDYISFVGLLADPRYCG+ YLEK+EVRVLL+QDP +WTYRPLS
Sbjct: 137  QIAYSLIEEQQGRRRSPDDYISFVGLLADPRYCGISYLEKKEVRVLLKQDPKFWTYRPLS 196

Query: 657  EQMVRAAADDVCFLLYIYHKMMEKLNERSLWHLAVRGALYSRCFCINDNEYADWPPVPPV 478
            E MVRAAADDV FL YIY+KMME+LNE SLW LAVRGALY RCFC+NDNEYADWP +P +
Sbjct: 197  ELMVRAAADDVRFLPYIYYKMMEELNEHSLWKLAVRGALYCRCFCVNDNEYADWPSLPNM 256

Query: 477  PDNLIVEGNAPEEEILSVLNVPHGKMGCVIGRRGASILSVKESCNAEILIGGAKGPPDKV 298
            P+NL+V+G APEEEILSVL +P GKMGCVIGR+GASILS+K+ C AEILIGGAKGPPD V
Sbjct: 257  PENLMVDGKAPEEEILSVLEIPQGKMGCVIGRKGASILSIKQCCKAEILIGGAKGPPDMV 316

Query: 297  FIIGPVKQVRKAEAILRGKM 238
            FIIGPVK+VRKAEAILRG++
Sbjct: 317  FIIGPVKEVRKAEAILRGRI 336


>ref|XP_004142915.1| PREDICTED: uncharacterized protein LOC101214970 [Cucumis sativus]
            gi|449522022|ref|XP_004168027.1| PREDICTED:
            uncharacterized protein LOC101223734 [Cucumis sativus]
          Length = 340

 Score =  542 bits (1397), Expect = e-152
 Identities = 255/316 (80%), Positives = 288/316 (91%)
 Frame = -2

Query: 1179 DPDAQLSKVPIHIVTHASQLPSEFLKPSPERHLVIGFDCEGVDLCRHGTLCIMQLAFPDG 1000
            DP+A  + VPIHIVTH SQLP EF++PSPE+ LV+GFDCEGVDLCRHG LC+MQ+AFPD 
Sbjct: 24   DPEANATLVPIHIVTHVSQLPKEFVEPSPEKPLVVGFDCEGVDLCRHGNLCVMQIAFPDA 83

Query: 999  IYLVDVIQGGMMLMKACKPALESSYITKVIHDCKRDSEALYFQFGIKLHNVVDTQIAYSL 820
            +YLVD +QGG  L+K CKPALES Y+TKVIHDCKRDSEALYFQFGIKL+NV+DTQIAYSL
Sbjct: 84   VYLVDAVQGGEELVKVCKPALESKYVTKVIHDCKRDSEALYFQFGIKLNNVIDTQIAYSL 143

Query: 819  IEEQEGRTRSPDDYISFVGLLADPRYCGVPYLEKQEVRVLLRQDPGYWTYRPLSEQMVRA 640
            +EEQEGRT++PD+YISFV LLAD RYCGV Y+EK+EVR+LLR+DP +WTYRP+SE MVRA
Sbjct: 144  LEEQEGRTKTPDNYISFVSLLADSRYCGVSYVEKEEVRLLLRKDPKFWTYRPMSELMVRA 203

Query: 639  AADDVCFLLYIYHKMMEKLNERSLWHLAVRGALYSRCFCINDNEYADWPPVPPVPDNLIV 460
            AADDV FLLYIYHKMMEKLN RSLW+LAVRGALY RCFCI+DN YADWPP+P VPDNL+ 
Sbjct: 204  AADDVRFLLYIYHKMMEKLNHRSLWYLAVRGALYCRCFCISDNGYADWPPLPSVPDNLVK 263

Query: 459  EGNAPEEEILSVLNVPHGKMGCVIGRRGASILSVKESCNAEILIGGAKGPPDKVFIIGPV 280
            EGNAPEEEILSVL+VPHG MG VIGRRGASILS+KESCNAEILIGGAKGPPDKV IIG V
Sbjct: 264  EGNAPEEEILSVLDVPHGMMGRVIGRRGASILSIKESCNAEILIGGAKGPPDKVLIIGSV 323

Query: 279  KQVRKAEAILRGKMLE 232
            +QVRKAEA+LRG+MLE
Sbjct: 324  RQVRKAEAMLRGRMLE 339


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