BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001901
         (1331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   189   1e-45
ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   184   4e-44
gb|ACU19159.1| unknown [Glycine max]                                  182   2e-43
ref|XP_002519056.1| rnf5, putative [Ricinus communis] gi|2235417...   181   4e-43
ref|XP_004134707.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   179   1e-42

>ref|XP_002282248.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Vitis vinifera]
          Length = 253

 Score =  189 bits (481), Expect = 1e-45
 Identities = 113/255 (44%), Positives = 145/255 (56%), Gaps = 9/255 (3%)
 Frame = -1

Query: 1187 MGINQCYEEIFSHDEMLDGDQSYVKE-KSAHDPATVPDNCKGCFDCNICLDYARDPVVTL 1011
            M + Q + E+ +  E  DGD S  K+ K+        +N  G FDCNICLD A DPVVTL
Sbjct: 1    MALEQDFPELAAQHES-DGDVSLQKKWKAISASEAASENSNGSFDCNICLDSAHDPVVTL 59

Query: 1010 CGHLYCWPCIYKWICSHSTSTTADHQQQQQCPVCKADVLDNTLVPLYGRGQVSPDEEPNS 831
            CGHLYCWPCIYKW+  H  ST+   +QQQ CPVCKA++   +LVPLYGRG  SP E    
Sbjct: 60   CGHLYCWPCIYKWL--HVQSTSPVTEQQQNCPVCKANISHTSLVPLYGRGP-SPSESETK 116

Query: 830  KDSLDLEIPRRPQAHGVHALTTT--------NPNQQLHNRPESSQSQFESDHNQNQQYNA 675
            K  +   IPRRP AHGVH L TT        +P++ LH  P  S SQ+         Y  
Sbjct: 117  KLHVGPAIPRRPPAHGVHTLITTTTSASLNSHPSRHLHPNPFQSHSQYFP-----HPYGG 171

Query: 674  PANSVASPMLSLRGITAHPMIWQFGDIVSTTVFRNPTEVGFFGYPSPYHQQLVGSSSPRA 495
             A   A+P L+      +P I  FG++V + +F   ++   F YP P    L+ S++PR 
Sbjct: 172  YA---ATPTLT---SVLNPTIGMFGEMVFSRMF-GSSDTSLFAYPYPNTYPLMASANPRM 224

Query: 494  RRQEMKDDESLNRIS 450
            RRQEM+ D  LNR+S
Sbjct: 225  RRQEMQLDRCLNRVS 239


>ref|XP_003545948.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 232

 Score =  184 bits (467), Expect = 4e-44
 Identities = 106/229 (46%), Positives = 139/229 (60%), Gaps = 3/229 (1%)
 Frame = -1

Query: 1127 QSYVKE--KSAHDPATVPDNCKGCFDCNICLDYARDPVVTLCGHLYCWPCIYKWICSHST 954
            Q Y+    K+  + AT  +N  GCFDCNICLD+A +PVVTLCGHLYCWPCIYKW+   S 
Sbjct: 4    QHYISRDLKTIPNAATETENSNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSD 63

Query: 953  STTADHQQQQQCPVCKADVLDNTLVPLYGRGQVSPDEEPNSKDSLDLEIPRRPQAHGVHA 774
            S   D  +  QCPVCKAD+ ++T+VPLYGRG  +  E   S  S D+ IP RP A  V A
Sbjct: 64   SLAPD--EHPQCPVCKADISNSTMVPLYGRGHAATAEGKTS--SCDVFIPPRPSASCVQA 119

Query: 773  LTTTNPNQQLHNRPESS-QSQFESDHNQNQQYNAPANSVASPMLSLRGITAHPMIWQFGD 597
            L  T+  +  H    +  Q  + S H   ++ +A      S ML+L G   HP+   FG+
Sbjct: 120  LLATSSQRGQHLPYRNPYQGHYFSSHPYQEEDDA-----TSQMLNL-GSHHHPVTGMFGE 173

Query: 596  IVSTTVFRNPTEVGFFGYPSPYHQQLVGSSSPRARRQEMKDDESLNRIS 450
            +V   VF NP  +  + YP+ Y  QL+GS++PR RRQEM+  +SLNRIS
Sbjct: 174  MVYARVFGNPENL--YAYPNSY--QLMGSATPRLRRQEMQAHKSLNRIS 218


>gb|ACU19159.1| unknown [Glycine max]
          Length = 232

 Score =  182 bits (461), Expect = 2e-43
 Identities = 106/229 (46%), Positives = 139/229 (60%), Gaps = 3/229 (1%)
 Frame = -1

Query: 1127 QSYVKE--KSAHDPATVPDNCKGCFDCNICLDYARDPVVTLCGHLYCWPCIYKWICSHST 954
            Q Y+    K+  + AT  +N  GCFDCNICLD+A +PVVTLCGHLYCWPCIYKW+   S 
Sbjct: 4    QHYISRDLKTIPNAATETENSNGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSD 63

Query: 953  STTADHQQQQQCPVCKADVLDNTLVPLYGRGQVSPDEEPNSKDSLDLEIPRRPQAHGVHA 774
            S   D  +  QCPVCKAD+ ++T+VPLYGRG  +  E   S  S D+ IP RP A  V A
Sbjct: 64   SLAPD--EHPQCPVCKADISNSTMVPLYGRGHAATAEGKTS--SCDVFIPPRPFASCVQA 119

Query: 773  LTTTNPNQQLHNRPESS-QSQFESDHNQNQQYNAPANSVASPMLSLRGITAHPMIWQFGD 597
            L  T+  +  H    +  Q  + S H   ++ +A      S ML+L G   HP+   FG+
Sbjct: 120  LLATSSQRGQHLPYRNPYQGHYFSFHPYQEEDDA-----TSQMLNL-GSHHHPVTGMFGE 173

Query: 596  IVSTTVFRNPTEVGFFGYPSPYHQQLVGSSSPRARRQEMKDDESLNRIS 450
            +V   VF NP  +  + YP+ Y  QL+GS++PR RRQEM+  +SLNRIS
Sbjct: 174  MVYARVFGNPENL--YAYPNSY--QLMGSATPRLRRQEMQAHKSLNRIS 218


>ref|XP_002519056.1| rnf5, putative [Ricinus communis] gi|223541719|gb|EEF43267.1| rnf5,
            putative [Ricinus communis]
          Length = 241

 Score =  181 bits (459), Expect = 4e-43
 Identities = 105/237 (44%), Positives = 139/237 (58%), Gaps = 7/237 (2%)
 Frame = -1

Query: 1139 LDGDQSYVKE-KSAHDPATVPDNCKGCFDCNICLDYARDPVVTLCGHLYCWPCIYKWICS 963
            +D ++ + +E KS    AT  ++  GCFDCNIC D+A +PVVTLCGHLYCWPCIYKW+  
Sbjct: 1    MDFERYFPREWKSIASAATGSESFSGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHV 60

Query: 962  HSTSTTADHQQQQQCPVCKADVLDNTLVPLYGRGQVSPDEEPNSKDSL-DLEIPRRPQAH 786
             S S  +D  +  QCPVCKAD+   T+VPLYGRGQ   + E   K S     IP RP A 
Sbjct: 61   QSASIASD--EHPQCPVCKADISHTTMVPLYGRGQAPAEAEIEGKASCRGTAIPPRPSAC 118

Query: 785  GVHALTTTNPNQQLHNRPESSQSQFESDHNQN-QQYNAPANSVASPMLSLRGITA----H 621
            G  AL  ++P       P  +  Q   +HN     Y++   +  SP+L+L G       H
Sbjct: 119  GAQAL-ISSPQHTAQQLPYHNPYQ---NHNYTPDPYSSFEEASQSPLLNLGGSAVTGFHH 174

Query: 620  PMIWQFGDIVSTTVFRNPTEVGFFGYPSPYHQQLVGSSSPRARRQEMKDDESLNRIS 450
            P +  FG++V   VF N   +  + Y + YH  L+GS+SPR RRQEM+ D+SLNRIS
Sbjct: 175  PFVGMFGEMVYARVFGNSDSL--YAYRNSYH--LMGSNSPRLRRQEMQADKSLNRIS 227


>ref|XP_004134707.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 2 [Cucumis
            sativus] gi|449479350|ref|XP_004155576.1| PREDICTED: E3
            ubiquitin-protein ligase RMA1H1-like isoform 2 [Cucumis
            sativus]
          Length = 238

 Score =  179 bits (454), Expect = 1e-42
 Identities = 106/231 (45%), Positives = 134/231 (58%), Gaps = 5/231 (2%)
 Frame = -1

Query: 1127 QSYVKEKSAHDPATVPDNCKGCFDCNICLDYARDPVVTLCGHLYCWPCIYKWICSHSTST 948
            + Y  +   H   T  +N KGCFDCNICLD+A +PVVTLCGHLYCWPCIYKW+   S S 
Sbjct: 4    EQYFAQGWKHVSGTERENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQSASL 63

Query: 947  TADHQQQQQCPVCKADVLDNTLVPLYGRGQVSPDEEPNSKD-SLDLEIPRRPQAHGVHAL 771
              D  +  QCPVCKAD+   T+VPLYGRGQ + + EP  K    D+ IP RP A G   L
Sbjct: 64   AID--EHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHDINIPPRPSACGNQIL 121

Query: 770  TTTNPNQQLHNRPESSQSQFESDHNQNQQYNAPANSVASPMLSLRGIT----AHPMIWQF 603
             T + +QQ    P  +  Q   +H+     N   +S ASP+L+L   +     HP++   
Sbjct: 122  ATPSTHQQ--QLPYRNPYQ-RPNHDPLLFANYEEDS-ASPLLNLARTSFSSFHHPVVGMI 177

Query: 602  GDIVSTTVFRNPTEVGFFGYPSPYHQQLVGSSSPRARRQEMKDDESLNRIS 450
            GD V   VF N   +  + Y + Y  QL GSS  R RRQEM+ D+SLNRIS
Sbjct: 178  GDFVHARVFGNSDNL--YSYRNSY--QLTGSSRNRLRRQEMQVDKSLNRIS 224