BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001898
         (1324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, p...   444   e-122
ref|NP_001050445.1| Os03g0437600 [Oryza sativa Japonica Group] g...   444   e-122
ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation prot...   443   e-122
ref|XP_002465088.1| hypothetical protein SORBIDRAFT_01g031880 [S...   441   e-121
gb|AFK41000.1| unknown [Medicago truncatula]                          440   e-121

>ref|XP_002524966.1| sigma factor sigb regulation protein rsbq, putative [Ricinus
            communis] gi|223535801|gb|EEF37463.1| sigma factor sigb
            regulation protein rsbq, putative [Ricinus communis]
          Length = 270

 Score =  444 bits (1142), Expect = e-122
 Identities = 214/268 (79%), Positives = 244/268 (91%)
 Frame = -2

Query: 1149 MGIVEEAHNLRVLGTGEKIIVLAHGFGTDQSVWKHLVPHLLNEYRVVLFDNMGAGPTNPD 970
            MGIVEEAHN+++LGTGE++IVLAHGFGTDQSVWKHLVPHL+++++VVLFDNMGAG TNPD
Sbjct: 1    MGIVEEAHNVKILGTGEQVIVLAHGFGTDQSVWKHLVPHLIDDFKVVLFDNMGAGTTNPD 60

Query: 969  YFDFERYSTLEGYAYDLLAILEELQVDSCIFXXXXXXXXXXXXXXINRPDLFSKLVMISA 790
            YFDFERY+ LEGYAYDLLAILEELQV+SC+F              I+RPDLF+K+VMISA
Sbjct: 61   YFDFERYAGLEGYAYDLLAILEELQVESCVFVGHSVSAMVGVVASISRPDLFTKIVMISA 120

Query: 789  SPRYLNDADYYGGFEQEELDQLFEAIGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 610
            SPRYLND DYYGGFEQE+L+QLFEA+ +NYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN
Sbjct: 121  SPRYLNDVDYYGGFEQEDLNQLFEAMEANYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 180

Query: 609  IRPDIALSVAQTIFQSDLRHALALVSVPCHILQSTKDLAVPVVVSEYLHRHLGSESIVEV 430
            +RPDIALSVAQTIFQSD+R  L +VSVPCHI+QS KDLAVPVVVSEYLH++LGSESI EV
Sbjct: 181  MRPDIALSVAQTIFQSDMRSILHMVSVPCHIVQSGKDLAVPVVVSEYLHQNLGSESIAEV 240

Query: 429  MPSDGHLPQLSSPDIVVPVLLRHIRHDI 346
            M +DGHLPQLSSPD+V+PVLLRHIRH+I
Sbjct: 241  MSTDGHLPQLSSPDVVIPVLLRHIRHNI 268


>ref|NP_001050445.1| Os03g0437600 [Oryza sativa Japonica Group]
            gi|108709023|gb|ABF96818.1| hydrolase, alpha/beta fold
            family protein, expressed [Oryza sativa Japonica Group]
            gi|113548916|dbj|BAF12359.1| Os03g0437600 [Oryza sativa
            Japonica Group] gi|215679017|dbj|BAG96447.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|215692426|dbj|BAG87846.1| unnamed protein product
            [Oryza sativa Japonica Group]
            gi|215737519|dbj|BAG96649.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 271

 Score =  444 bits (1142), Expect = e-122
 Identities = 218/271 (80%), Positives = 243/271 (89%), Gaps = 1/271 (0%)
 Frame = -2

Query: 1149 MGIVEEAHNLRVLGTGEK-IIVLAHGFGTDQSVWKHLVPHLLNEYRVVLFDNMGAGPTNP 973
            MGIVEEAHNLRV+G G++ +IVLAHGFGTDQSVWKHLVPHL+ +YRVVLFD MGAGPTNP
Sbjct: 1    MGIVEEAHNLRVVGEGKRGVIVLAHGFGTDQSVWKHLVPHLVADYRVVLFDTMGAGPTNP 60

Query: 972  DYFDFERYSTLEGYAYDLLAILEELQVDSCIFXXXXXXXXXXXXXXINRPDLFSKLVMIS 793
            DYFDF RY+TLEGYA DLLAIL+EL+V SCI+              I+RPDLFSKLV++S
Sbjct: 61   DYFDFSRYATLEGYALDLLAILQELRVASCIYVGHSVSAVIGAIASISRPDLFSKLVLLS 120

Query: 792  ASPRYLNDADYYGGFEQEELDQLFEAIGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLF 613
            ASPRYLND DYYGGFEQE+LD+LFEA+GSNYKAWCSGFAPL VGGDM+SVAVQEFSRTLF
Sbjct: 121  ASPRYLNDVDYYGGFEQEDLDELFEAMGSNYKAWCSGFAPLCVGGDMESVAVQEFSRTLF 180

Query: 612  NIRPDIALSVAQTIFQSDLRHALALVSVPCHILQSTKDLAVPVVVSEYLHRHLGSESIVE 433
            NIRPDIALSVAQTIFQSD+R  L LV+VPCHI+QSTKDLAVPVVVSEYLH+HLG +SIVE
Sbjct: 181  NIRPDIALSVAQTIFQSDVRSLLPLVTVPCHIVQSTKDLAVPVVVSEYLHKHLGGDSIVE 240

Query: 432  VMPSDGHLPQLSSPDIVVPVLLRHIRHDIEV 340
            VMPS+GHLPQLSSPDIV+PVLLRHI+HDI V
Sbjct: 241  VMPSEGHLPQLSSPDIVIPVLLRHIQHDIAV 271


>ref|XP_002284043.1| PREDICTED: sigma factor sigB regulation protein rsbQ [Vitis vinifera]
            gi|147783136|emb|CAN70905.1| hypothetical protein
            VITISV_044176 [Vitis vinifera]
            gi|147795384|emb|CAN74235.1| hypothetical protein
            VITISV_040226 [Vitis vinifera]
          Length = 270

 Score =  443 bits (1139), Expect = e-122
 Identities = 218/268 (81%), Positives = 239/268 (89%)
 Frame = -2

Query: 1149 MGIVEEAHNLRVLGTGEKIIVLAHGFGTDQSVWKHLVPHLLNEYRVVLFDNMGAGPTNPD 970
            MGIVEEAHNL+V+G+GE+IIVLAHGFGTDQS+WKHLVPHL+++YRV+LFDNMGAG TNP+
Sbjct: 1    MGIVEEAHNLKVVGSGEQIIVLAHGFGTDQSLWKHLVPHLVDDYRVILFDNMGAGTTNPE 60

Query: 969  YFDFERYSTLEGYAYDLLAILEELQVDSCIFXXXXXXXXXXXXXXINRPDLFSKLVMISA 790
            YFDFERYS LEGYAYD+LAILEELQV SCIF              I RPDLFSKL+ I+ 
Sbjct: 61   YFDFERYSNLEGYAYDVLAILEELQVQSCIFVGHSVSAMIGAIASITRPDLFSKLISING 120

Query: 789  SPRYLNDADYYGGFEQEELDQLFEAIGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 610
            SPRYLND DYYGGFEQE+LDQLFEA+GSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN
Sbjct: 121  SPRYLNDVDYYGGFEQEDLDQLFEAMGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 180

Query: 609  IRPDIALSVAQTIFQSDLRHALALVSVPCHILQSTKDLAVPVVVSEYLHRHLGSESIVEV 430
            +RPDIALSVAQTIFQ DLR  L  V+VPCHILQS KDLAVPVVVSEYLH++LG ESIVEV
Sbjct: 181  MRPDIALSVAQTIFQVDLRQILCHVTVPCHILQSIKDLAVPVVVSEYLHQNLGGESIVEV 240

Query: 429  MPSDGHLPQLSSPDIVVPVLLRHIRHDI 346
            M SDGHLPQLSSPDIVVPVLLRHIR++I
Sbjct: 241  MTSDGHLPQLSSPDIVVPVLLRHIRYNI 268


>ref|XP_002465088.1| hypothetical protein SORBIDRAFT_01g031880 [Sorghum bicolor]
            gi|241918942|gb|EER92086.1| hypothetical protein
            SORBIDRAFT_01g031880 [Sorghum bicolor]
          Length = 271

 Score =  441 bits (1133), Expect = e-121
 Identities = 217/271 (80%), Positives = 241/271 (88%), Gaps = 1/271 (0%)
 Frame = -2

Query: 1149 MGIVEEAHNLRVLGTGEK-IIVLAHGFGTDQSVWKHLVPHLLNEYRVVLFDNMGAGPTNP 973
            MGIVEEAHNLRV+G G++ +IVLAHGFGTDQSVWKHLVPHL+ +YRVVLFD MGAGPTNP
Sbjct: 1    MGIVEEAHNLRVVGEGKRGVIVLAHGFGTDQSVWKHLVPHLVADYRVVLFDTMGAGPTNP 60

Query: 972  DYFDFERYSTLEGYAYDLLAILEELQVDSCIFXXXXXXXXXXXXXXINRPDLFSKLVMIS 793
            DYFDF RY+TLEGYA DLLAIL+EL V SCI+              I+RPDLF+KLV++S
Sbjct: 61   DYFDFARYATLEGYALDLLAILQELGVQSCIYVGHSVSAVIGALASISRPDLFTKLVLLS 120

Query: 792  ASPRYLNDADYYGGFEQEELDQLFEAIGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLF 613
            ASPRYLND DYYGGFEQ+ELD+LFEA+ SNYKAWCSGFAPL VGGDM+SVAVQEFSRTLF
Sbjct: 121  ASPRYLNDVDYYGGFEQDELDELFEAMRSNYKAWCSGFAPLCVGGDMESVAVQEFSRTLF 180

Query: 612  NIRPDIALSVAQTIFQSDLRHALALVSVPCHILQSTKDLAVPVVVSEYLHRHLGSESIVE 433
            NIRPDIALSVAQTIFQSD+R  L LVSVPCHI+QSTKDLAVPVVVSEYLH+HLG +SIVE
Sbjct: 181  NIRPDIALSVAQTIFQSDVRSLLPLVSVPCHIIQSTKDLAVPVVVSEYLHKHLGGDSIVE 240

Query: 432  VMPSDGHLPQLSSPDIVVPVLLRHIRHDIEV 340
            VMPS+GHLPQLSSPDIV+PVLLRHI+HDI V
Sbjct: 241  VMPSEGHLPQLSSPDIVIPVLLRHIQHDIAV 271


>gb|AFK41000.1| unknown [Medicago truncatula]
          Length = 270

 Score =  440 bits (1131), Expect = e-121
 Identities = 208/268 (77%), Positives = 243/268 (90%)
 Frame = -2

Query: 1149 MGIVEEAHNLRVLGTGEKIIVLAHGFGTDQSVWKHLVPHLLNEYRVVLFDNMGAGPTNPD 970
            MGIVEEAHN++VLG+G + IVLAHGFGTDQSVWKHLVPHLL+E+RV+L+DNMGAG TNPD
Sbjct: 1    MGIVEEAHNVKVLGSGSRFIVLAHGFGTDQSVWKHLVPHLLDEFRVILYDNMGAGTTNPD 60

Query: 969  YFDFERYSTLEGYAYDLLAILEELQVDSCIFXXXXXXXXXXXXXXINRPDLFSKLVMISA 790
            YFDFERYSTLEGYAYDLLAILEEL+VDSCIF              I+RPDLF+K+++ISA
Sbjct: 61   YFDFERYSTLEGYAYDLLAILEELRVDSCIFVGHSVSAMIGTVASISRPDLFNKIILISA 120

Query: 789  SPRYLNDADYYGGFEQEELDQLFEAIGSNYKAWCSGFAPLAVGGDMDSVAVQEFSRTLFN 610
            SPRYLND DY+GGFEQE+LDQLF+A+ SNYK+WCSGFAP+AVGGDM+SVAVQEFSRTLFN
Sbjct: 121  SPRYLNDRDYFGGFEQEDLDQLFDAMASNYKSWCSGFAPMAVGGDMESVAVQEFSRTLFN 180

Query: 609  IRPDIALSVAQTIFQSDLRHALALVSVPCHILQSTKDLAVPVVVSEYLHRHLGSESIVEV 430
            +RPDIALSV QTIF+SD+R  L +V+VPCHI+QS KDLAVPVVV+EYLH+H+GSESIVEV
Sbjct: 181  MRPDIALSVLQTIFKSDMRQILCMVTVPCHIIQSMKDLAVPVVVAEYLHQHVGSESIVEV 240

Query: 429  MPSDGHLPQLSSPDIVVPVLLRHIRHDI 346
            M ++GHLPQLSSPD+VVPV+L+HIRHDI
Sbjct: 241  MSTEGHLPQLSSPDVVVPVILKHIRHDI 268