BLASTX nr result

ID: Coptis21_contig00001894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001894
         (2067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280836.1| PREDICTED: 2-keto-3-deoxy-L-rhamnonate aldol...   431   e-118
ref|XP_002534296.1| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldol...   426   e-116
ref|XP_002304576.1| predicted protein [Populus trichocarpa] gi|2...   413   e-112
ref|XP_002872535.1| HpcH/HpaI aldolase family protein [Arabidops...   411   e-112
ref|XP_004146130.1| PREDICTED: 2-keto-3-deoxy-L-rhamnonate aldol...   410   e-112

>ref|XP_002280836.1| PREDICTED: 2-keto-3-deoxy-L-rhamnonate aldolase-like [Vitis vinifera]
          Length = 359

 Score =  431 bits (1107), Expect = e-118
 Identities = 225/319 (70%), Positives = 256/319 (80%), Gaps = 8/319 (2%)
 Frame = -2

Query: 1901 SLLSLSTHFSKPLNPRSKSIKSTDLSLPEN------PTLPKTLKSRLANGETLYGLFLLS 1740
            +L +L+   S+   P   S  ++DL   +N      P   ++LKSRL +GETLYGLFLLS
Sbjct: 42   NLKTLNPILSQSPAPLRLSNTTSDLIAYDNSVPVPVPVPSRSLKSRLHDGETLYGLFLLS 101

Query: 1739 FSPTLAEIAGLAGYDFVVVDMEHGPGGISDALPCLHALAATGTPAILRLPESTAAWAKKA 1560
            FSPTLAEIAGLAGYDFVVVDMEHG GG+SDALPCLHALAAT TPAI+RLPES   WAKKA
Sbjct: 102  FSPTLAEIAGLAGYDFVVVDMEHGHGGVSDALPCLHALAATRTPAIIRLPESCPTWAKKA 161

Query: 1559 LDIGPQGIMFPMIENHKSAKKAVSYCRFPPGGVRGSAHTLVRASNYGINDGYLANYEEEL 1380
            LD+GPQGIMFPMI++ K A+KAVSYCRFPP GVRGSAHT+VRAS+YGI+ GYL+NYEEEL
Sbjct: 162  LDLGPQGIMFPMIDSPKLARKAVSYCRFPPAGVRGSAHTVVRASSYGIDAGYLSNYEEEL 221

Query: 1379 LIMCQVESEEGVKKIEEIAAVDGVDCIQMGPLDLSASLGYLWDPGNKKVRQVVREAEKGV 1200
            LIMCQVESEE VKKIE+IAAVDGVDCIQMGP+DLSAS+GYLWDPGNKKVR++++ AEKGV
Sbjct: 222  LIMCQVESEEAVKKIEDIAAVDGVDCIQMGPMDLSASMGYLWDPGNKKVREMMKVAEKGV 281

Query: 1199 L--EKKNGGGAYLGGFAMPHDGAEQLRMRGYHMVSGAVDLGLFRSAVVEDVKRFKMNLMN 1026
            L  +KK   GAYL GFAMPHD  + LR RGYHMVSGAVD+GLFRSA VEDVK+FKM L  
Sbjct: 282  LGTKKKPREGAYLAGFAMPHDSPDDLRSRGYHMVSGAVDVGLFRSAAVEDVKKFKMGLKE 341

Query: 1025 GSXXXXXXXXXXXXKYWSE 969
             S            KYWSE
Sbjct: 342  AS-DDEKENAKEDEKYWSE 359


>ref|XP_002534296.1| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, putative [Ricinus
            communis] gi|223525555|gb|EEF28088.1|
            2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, putative
            [Ricinus communis]
          Length = 357

 Score =  426 bits (1094), Expect = e-116
 Identities = 218/326 (66%), Positives = 259/326 (79%), Gaps = 7/326 (2%)
 Frame = -2

Query: 1925 NLPCSEPISLLSLSTHFSKPLNPRSKSIKSTDLSLPENPTLPKT------LKSRLANGET 1764
            N     P ++++ +T   K L P  KS  S+D+    + T P +      LKSRL NGET
Sbjct: 35   NFKTLNPNTIITTTTF--KTLTPL-KSSTSSDVDPTSSSTTPISAASSFSLKSRLRNGET 91

Query: 1763 LYGLFLLSFSPTLAEIAGLAGYDFVVVDMEHGPGGISDALPCLHALAATGTPAILRLPES 1584
            LYG+FLLSFSPTLAEI+GLAGYDF VVDMEHGPGGI++AL CL ALA+T TPAI+RLPE+
Sbjct: 92   LYGIFLLSFSPTLAEISGLAGYDFAVVDMEHGPGGITEALNCLRALASTQTPAIIRLPET 151

Query: 1583 TAAWAKKALDIGPQGIMFPMIENHKSAKKAVSYCRFPPGGVRGSAHTLVRASNYGINDGY 1404
               WAKKALD+GPQGIMFPM+E+ K AKKAVSYCRFPP G+RGSAHT+VRAS+YGI++GY
Sbjct: 152  CPTWAKKALDLGPQGIMFPMVESPKMAKKAVSYCRFPPEGIRGSAHTVVRASSYGIDEGY 211

Query: 1403 LANYEEELLIMCQVESEEGVKKIEEIAAVDGVDCIQMGPLDLSASLGYLWDPGNKKVRQV 1224
            L+NY +ELLIMCQVESEEGVKK +EIAAVDGVDCIQMGPLDLSAS+GYLWDPG+KKVR++
Sbjct: 212  LSNYGDELLIMCQVESEEGVKKADEIAAVDGVDCIQMGPLDLSASMGYLWDPGHKKVREM 271

Query: 1223 VREAEKGVL-EKKNGGGAYLGGFAMPHDGAEQLRMRGYHMVSGAVDLGLFRSAVVEDVKR 1047
            +R AEK VL  KK GGGAYL GF+MPHDG   L+ RGY+MV+G VD+GLFRSA V+DVK+
Sbjct: 272  MRAAEKAVLGSKKGGGGAYLAGFSMPHDGPIDLKSRGYNMVAGTVDVGLFRSAAVDDVKK 331

Query: 1046 FKMNLMNGSXXXXXXXXXXXXKYWSE 969
            FKM+L+ GS            KYWSE
Sbjct: 332  FKMSLVQGSDDEEEHDKDADEKYWSE 357


>ref|XP_002304576.1| predicted protein [Populus trichocarpa] gi|222842008|gb|EEE79555.1|
            predicted protein [Populus trichocarpa]
          Length = 248

 Score =  413 bits (1061), Expect = e-112
 Identities = 201/252 (79%), Positives = 228/252 (90%)
 Frame = -2

Query: 1796 TLKSRLANGETLYGLFLLSFSPTLAEIAGLAGYDFVVVDMEHGPGGISDALPCLHALAAT 1617
            +LKSRL NGETLYG+FLLSFSPT+AEIAGLAGYDF VVDMEHGPGGI+DAL CL ALAAT
Sbjct: 1    SLKSRLQNGETLYGIFLLSFSPTIAEIAGLAGYDFAVVDMEHGPGGITDALHCLRALAAT 60

Query: 1616 GTPAILRLPESTAAWAKKALDIGPQGIMFPMIENHKSAKKAVSYCRFPPGGVRGSAHTLV 1437
             TPAILRLPES+  WAKKALD+GPQGIMFPMIE+ K AKKAVSYCRFPP G+RGSAHT+V
Sbjct: 61   RTPAILRLPESSPTWAKKALDLGPQGIMFPMIESPKMAKKAVSYCRFPPEGIRGSAHTVV 120

Query: 1436 RASNYGINDGYLANYEEELLIMCQVESEEGVKKIEEIAAVDGVDCIQMGPLDLSASLGYL 1257
            RAS+YGI++GYL+NY EELLIMCQVESEEGVKK EEI+AVDGVDC+QMGPLDLSAS+GYL
Sbjct: 121  RASDYGIDEGYLSNYAEELLIMCQVESEEGVKKAEEISAVDGVDCVQMGPLDLSASMGYL 180

Query: 1256 WDPGNKKVRQVVREAEKGVLEKKNGGGAYLGGFAMPHDGAEQLRMRGYHMVSGAVDLGLF 1077
            WDPG+KKVR+++R +EKGVL+    GGAYLGGFAMPHDG   L+ RGY MVSG VD+GLF
Sbjct: 181  WDPGHKKVREMMRVSEKGVLK----GGAYLGGFAMPHDGPIDLKARGYRMVSGTVDVGLF 236

Query: 1076 RSAVVEDVKRFK 1041
            RSA V+DV++FK
Sbjct: 237  RSAAVDDVRKFK 248


>ref|XP_002872535.1| HpcH/HpaI aldolase family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297318372|gb|EFH48794.1| HpcH/HpaI aldolase family
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 358

 Score =  411 bits (1056), Expect = e-112
 Identities = 204/280 (72%), Positives = 234/280 (83%), Gaps = 4/280 (1%)
 Frame = -2

Query: 1796 TLKSRLANGETLYGLFLLSFSPTLAEIAGLAGYDFVVVDMEHGPGGISDALPCLHALAAT 1617
            +LKSRL  GETLYGLFLLSFSPTLAEIA  AGYD+VVVDMEHGPGGI +AL C+ AL A 
Sbjct: 79   SLKSRLRGGETLYGLFLLSFSPTLAEIAAHAGYDYVVVDMEHGPGGIPEALDCIRALNAA 138

Query: 1616 GTPAILRLPESTAAWAKKALDIGPQGIMFPMIENHKSAKKAVSYCRFPPGGVRGSAHTLV 1437
            GT AILRLPE+++ WAKKALD+GPQGIMFPMIE+ K A KAVSYCRFPP G+RGSAHT+V
Sbjct: 139  GTSAILRLPENSSTWAKKALDLGPQGIMFPMIESRKDATKAVSYCRFPPDGIRGSAHTVV 198

Query: 1436 RASNYGINDGYLANYEEELLIMCQVESEEGVKKIEEIAAVDGVDCIQMGPLDLSASLGYL 1257
            RASNYGI++GYL+NY EE+LIMCQVES EGVKK +EIAAVDGVDC+QMGPLDLSASLGYL
Sbjct: 199  RASNYGIDEGYLSNYAEEILIMCQVESSEGVKKADEIAAVDGVDCVQMGPLDLSASLGYL 258

Query: 1256 WDPGNKKVRQVVREAEKGVLEKKNG-GGAYLGGFAMPHDGAEQLRMRGYHMVSGAVDLGL 1080
            WDPG+KKVR+++++AEK VL      GGAYL GFAMPHDGA ++R RGYHMV+GAVD+GL
Sbjct: 259  WDPGHKKVREMMKKAEKSVLTSDPAKGGAYLSGFAMPHDGAVEIRGRGYHMVAGAVDVGL 318

Query: 1079 FRSAVVEDVKRFKMNLMN---GSXXXXXXXXXXXXKYWSE 969
            FR+A VEDV+RFKM L+N   G             KYWSE
Sbjct: 319  FRNAAVEDVRRFKMGLVNESDGEDSLEHDKDVDDEKYWSE 358


>ref|XP_004146130.1| PREDICTED: 2-keto-3-deoxy-L-rhamnonate aldolase-like [Cucumis
            sativus] gi|449495022|ref|XP_004159712.1| PREDICTED:
            2-keto-3-deoxy-L-rhamnonate aldolase-like [Cucumis
            sativus]
          Length = 363

 Score =  410 bits (1054), Expect = e-112
 Identities = 215/322 (66%), Positives = 256/322 (79%), Gaps = 26/322 (8%)
 Frame = -2

Query: 1907 PISL-LSLSTHFSKPLN-----PRSKSIKS---TDLSLPENP-----------TLP---K 1797
            PIS  LS ST FSK L+     P+S S ++      S P NP           TLP   +
Sbjct: 21   PISKSLSFSTPFSKSLSFSTPFPKSSSFRTLLPVSSSNPSNPSPIDSSDSFADTLPAVNR 80

Query: 1796 TLKSRLANGETLYGLFLLSFSPTLAEIAGLAGYDFVVVDMEHGPGGISDALPCLHALAAT 1617
            TLKSRL NG+TLYG+FLLSFSP+LAEIAG +GYDFVVVDMEHG GGISDALPCLHALAA 
Sbjct: 81   TLKSRLRNGDTLYGIFLLSFSPSLAEIAGFSGYDFVVVDMEHGYGGISDALPCLHALAAA 140

Query: 1616 GTPAILRLPESTAAWAKKALDIGPQGIMFPMIENHKSAKKAVSYCRFPPGGVRGSAHTLV 1437
             TPAILR+PE++A WAKKALD+GPQGIMFPMI++ K AKKAVSYCRFPP GVRGSAH +V
Sbjct: 141  QTPAILRIPENSATWAKKALDLGPQGIMFPMIDSSKEAKKAVSYCRFPPAGVRGSAHPVV 200

Query: 1436 RASNYGINDGYLANYEEELLIMCQVESEEGVKKIEEIAAVDGVDCIQMGPLDLSASLGYL 1257
            RAS YGI++GYL NYE+ELLIMCQVESE+ VKKI+EI  VDGVDCIQMGPLD+S S+GYL
Sbjct: 201  RASKYGIDEGYLTNYEDELLIMCQVESEQAVKKIDEIMEVDGVDCIQMGPLDMSGSMGYL 260

Query: 1256 WDPGNKKVRQVVREAEKGVLEK--KNG-GGAYLGGFAMPHDGAEQLRMRGYHMVSGAVDL 1086
            WDPG+KKV++++R+AE  VLE   +NG  G++L GF+MPHDG   ++ RGY M+SGAVDL
Sbjct: 261  WDPGHKKVKELMRKAEMAVLESQIENGEKGSFLCGFSMPHDGPIDMKRRGYQMISGAVDL 320

Query: 1085 GLFRSAVVEDVKRFKMNLMNGS 1020
            GLFRSA VEDV++F+M+ M+ S
Sbjct: 321  GLFRSAAVEDVRKFRMSEMDSS 342


Top