BLASTX nr result

ID: Coptis21_contig00001888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001888
         (1303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|2...   167   4e-39
emb|CBI21211.3| unnamed protein product [Vitis vinifera]              143   8e-32
ref|XP_002277117.1| PREDICTED: ninja-family protein AFP2-like [V...   143   8e-32
emb|CAN77669.1| hypothetical protein VITISV_038107 [Vitis vinifera]   143   8e-32
emb|CBI27295.3| unnamed protein product [Vitis vinifera]              125   2e-26

>ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|222864041|gb|EEF01172.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  167 bits (424), Expect = 4e-39
 Identities = 122/322 (37%), Positives = 159/322 (49%), Gaps = 23/322 (7%)
 Frame = +1

Query: 88  NECMRDLLQRF-----SEKKHTFVETPEKEEVELNLGLSLGGCFGVEPNEKTSLLRSSSN 252
           N   RDL+QR       + K    E  E EE+ELNLGLSLGG FGV+   +  L RSSS 
Sbjct: 9   NRYPRDLVQRLISSDAQQYKTATSEGEEAEEIELNLGLSLGGRFGVDKTSE-KLTRSSSI 67

Query: 253 ACYTTSGFREDGLFS-------LTRTSSLPVENEVETRKRKGLETVRHMEGMKKRSEKER 411
           A         D L +       L RTSSLP E E E RKRK  +++R ME  ++RSEK++
Sbjct: 68  AGSIPLLRDHDALSTPPVSYPFLIRTSSLPTETEEEWRKRKENQSLRRMEAKRRRSEKQK 127

Query: 412 CLR-----DENDVKSESLIPLGPVHWCFGSQGMEDXXXXXXXXXXXXXXXXXXXXXXXXX 576
            LR     +E  +   + +P     W     G+ +                         
Sbjct: 128 NLRGELNLEEVKLNKGNWVPT----WANKQSGVVNRSSNLEGQQQQQGSRGSVESLGGSS 183

Query: 577 XXXXXXXXXXXXXXXT-----SPASVLSLPEQSEHKPTLVPCSKPIQKSDTSGVTAETPL 741
                          +     SPAS  SL E+S  +      +K I+ +  +  T    L
Sbjct: 184 SGLSEMESKPVQGSSSGGEARSPASNQSLQERSSQEAVGSSGTKKIENACRASRTEPENL 243

Query: 742 DKHKVMNSCR-MESEMKVMQEMPCVFTKGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSC 918
            K       R  E     M++MPCVFTKGDGPNG+R++G+LY+Y  G+EVRI+CVCHGS 
Sbjct: 244 SKKLDSAENRGREIGTNAMEDMPCVFTKGDGPNGRRVDGILYKYGKGEEVRIMCVCHGSF 303

Query: 919 LTPAEFVKHAGGNDVTHPLRHI 984
            +PAEFVKHAGG+DV HPLRHI
Sbjct: 304 HSPAEFVKHAGGSDVDHPLRHI 325


>emb|CBI21211.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  143 bits (361), Expect = 8e-32
 Identities = 69/120 (57%), Positives = 85/120 (70%)
 Frame = +1

Query: 625 SPASVLSLPEQSEHKPTLVPCSKPIQKSDTSGVTAETPLDKHKVMNSCRMESEMKVMQEM 804
           SPAS+ SLP QSE KP + P   P +     GV AE    K  + +    E   KVM++M
Sbjct: 571 SPASIQSLPGQSEQKPLISP-GTPEKSGKVGGVVAENQPKKPTISSRGVSEMARKVMEDM 629

Query: 805 PCVFTKGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSCLTPAEFVKHAGGNDVTHPLRHI 984
           PCV T GDGPNGK+++G LY+Y+ G+EVRIVCVCHG+ L+PAEFVKHAGG+DV HPLRHI
Sbjct: 630 PCVSTTGDGPNGKKVDGFLYRYKKGEEVRIVCVCHGTFLSPAEFVKHAGGSDVAHPLRHI 689


>ref|XP_002277117.1| PREDICTED: ninja-family protein AFP2-like [Vitis vinifera]
          Length = 367

 Score =  143 bits (361), Expect = 8e-32
 Identities = 69/120 (57%), Positives = 85/120 (70%)
 Frame = +1

Query: 625 SPASVLSLPEQSEHKPTLVPCSKPIQKSDTSGVTAETPLDKHKVMNSCRMESEMKVMQEM 804
           SPAS+ SLP QSE KP + P   P +     GV AE    K  + +    E   KVM++M
Sbjct: 241 SPASIQSLPGQSEQKPLISP-GTPEKSGKVGGVVAENQPKKPTISSRGVSEMARKVMEDM 299

Query: 805 PCVFTKGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSCLTPAEFVKHAGGNDVTHPLRHI 984
           PCV T GDGPNGK+++G LY+Y+ G+EVRIVCVCHG+ L+PAEFVKHAGG+DV HPLRHI
Sbjct: 300 PCVSTTGDGPNGKKVDGFLYRYKKGEEVRIVCVCHGTFLSPAEFVKHAGGSDVAHPLRHI 359



 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 11/114 (9%)
 Frame = +1

Query: 103 DLLQR-----FSEKKHTFVETPEKEEVELNLGLSLGGCFGVEPNEKTSLLRSSSNACYTT 267
           DLLQR        +K     + E  E+EL+LGLSL G FGV+P +   L RSSS + + T
Sbjct: 7   DLLQRVIAGNLFPRKFEEAASEETGEIELSLGLSLNGRFGVDPKKAKMLTRSSSISDFMT 66

Query: 268 SGFREDG------LFSLTRTSSLPVENEVETRKRKGLETVRHMEGMKKRSEKER 411
               +D       + +LTRT SLP+E E E RKRK L+T+R +E  +KR+ K+R
Sbjct: 67  PLRYQDRASTVLPITALTRTCSLPMETEEEWRKRKELQTLRRLEAKRKRTAKQR 120


>emb|CAN77669.1| hypothetical protein VITISV_038107 [Vitis vinifera]
          Length = 1100

 Score =  143 bits (361), Expect = 8e-32
 Identities = 69/120 (57%), Positives = 85/120 (70%)
 Frame = +1

Query: 625  SPASVLSLPEQSEHKPTLVPCSKPIQKSDTSGVTAETPLDKHKVMNSCRMESEMKVMQEM 804
            SPAS+ SLP QSE KP + P   P +     GV AE    K  + +    E   KVM++M
Sbjct: 974  SPASIQSLPGQSEQKPLISP-GTPEKSGKVGGVVAENQPKKPTISSRGVSEMARKVMEDM 1032

Query: 805  PCVFTKGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSCLTPAEFVKHAGGNDVTHPLRHI 984
            PCV T GDGPNGK+++G LY+Y+ G+EVRIVCVCHG+ L+PAEFVKHAGG+DV HPLRHI
Sbjct: 1033 PCVSTTGDGPNGKKVDGFLYRYKKGEEVRIVCVCHGTFLSPAEFVKHAGGSDVAHPLRHI 1092



 Score = 76.3 bits (186), Expect = 2e-11
 Identities = 49/114 (42%), Positives = 67/114 (58%), Gaps = 11/114 (9%)
 Frame = +1

Query: 103  DLLQR-----FSEKKHTFVETPEKEEVELNLGLSLGGCFGVEPNEKTSLLRSSSNACYTT 267
            DLLQR        +K     + E  E+EL+LGLSL G FGV+P +   L RSSS + + T
Sbjct: 740  DLLQRVIAGNLFPRKFEEAASEETGEIELSLGLSLNGRFGVDPKKAKMLTRSSSISDFMT 799

Query: 268  SGFREDG------LFSLTRTSSLPVENEVETRKRKGLETVRHMEGMKKRSEKER 411
                +D       + +LTRT SLP+E E E RKRK L+T+R +E  +KR+ K+R
Sbjct: 800  PLRYQDRASTVLPITALTRTCSLPMETEEEWRKRKELQTLRRLEAKRKRTAKQR 853


>emb|CBI27295.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  125 bits (315), Expect = 2e-26
 Identities = 64/115 (55%), Positives = 79/115 (68%), Gaps = 1/115 (0%)
 Frame = +1

Query: 643 SLPEQSEHKPTLVPCSKPIQKSD-TSGVTAETPLDKHKVMNSCRMESEMKVMQEMPCVFT 819
           SL EQS  + +    +KP + +  TSG   E P     +  +    S M  M +MPCVFT
Sbjct: 229 SLQEQSIQEASGSSRTKPNEGTGRTSGAEMENPSKNPGLSENRGRGSGMNFMGDMPCVFT 288

Query: 820 KGDGPNGKRIEGLLYQYRSGKEVRIVCVCHGSCLTPAEFVKHAGGNDVTHPLRHI 984
           +GDGPNG+RIEG+LY+Y  G+EVRI+CVCHGS L+PAEFVKHAGG DV HPLRHI
Sbjct: 289 RGDGPNGRRIEGILYKYGKGEEVRIMCVCHGSFLSPAEFVKHAGGGDVAHPLRHI 343



 Score = 84.7 bits (208), Expect = 5e-14
 Identities = 60/127 (47%), Positives = 73/127 (57%), Gaps = 18/127 (14%)
 Frame = +1

Query: 100 RDLLQRF-------SEKKHTFVETPEKEEVELNLGLSLGGCFGVEPNEKTSLLRSSSNAC 258
           RDLLQR        S+         + EE+ELNLGLSLGG FGV+ +EK  L+RSSS A 
Sbjct: 6   RDLLQRLMGNSGEQSQYASMVKGEDDPEEIELNLGLSLGGRFGVDKSEK-KLMRSSSIAG 64

Query: 259 YTTSGFREDGLF-------SLTRTSSLPVENEVETRKRKGLETVRHMEGMKKRSEKER-- 411
                  ED L        SL RTSSLP E + E RKRK L+T+R ME  ++RSEK+R  
Sbjct: 65  SIGITRDEDALVTPAVSYSSLMRTSSLPTETQEEWRKRKELQTLRRMEAKRRRSEKQRNK 124

Query: 412 --CLRDE 426
             C+ DE
Sbjct: 125 EGCVEDE 131


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