BLASTX nr result

ID: Coptis21_contig00001885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001885
         (701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272570.1| PREDICTED: uncharacterized protein LOC100253...   140   2e-31
emb|CBI34596.3| unnamed protein product [Vitis vinifera]              133   4e-29
ref|XP_002303697.1| predicted protein [Populus trichocarpa] gi|2...   129   6e-28
ref|XP_002297942.1| predicted protein [Populus trichocarpa] gi|2...   127   2e-27
ref|XP_002518920.1| hypothetical protein RCOM_1313640 [Ricinus c...   126   4e-27

>ref|XP_002272570.1| PREDICTED: uncharacterized protein LOC100253094 [Vitis vinifera]
          Length = 342

 Score =  140 bits (354), Expect = 2e-31
 Identities = 84/167 (50%), Positives = 104/167 (62%), Gaps = 11/167 (6%)
 Frame = -2

Query: 700 DMVEERKMLRVAEVLREERVQMKLTNAKILFEEKISELEFSTKAAFE--SALASKKEQQL 527
           ++ EERKMLR+AEVLREERVQMKL +AK L EEK+ ELE + +   E  S+    K Q+ 
Sbjct: 175 EIEEERKMLRMAEVLREERVQMKLADAKFLLEEKLLELEVTKQTQVERPSSKMEHKNQED 234

Query: 526 HMVGTVTSHEPTGXXXXXXXXXXXXXN---------VRSTENKPRASPEAENPHIKRGIK 374
           +  G  T+  P                         V S   + RASPE ENPHIKRGIK
Sbjct: 235 NGRGITTASAPAAISCGESARFIPGEKPTCNDSNAVVPSMAIQRRASPETENPHIKRGIK 294

Query: 373 GFVKFPRVVRAISSRGRHLGSKVECQKAQXXXXLRQKSPFRTDNLTM 233
           GFV+FPRVVRAI SR RHLG+K+ECQKAQ    L+QK+P R+++L M
Sbjct: 295 GFVEFPRVVRAIGSRSRHLGTKLECQKAQLRILLKQKNPIRSNSLIM 341


>emb|CBI34596.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score =  133 bits (334), Expect = 4e-29
 Identities = 80/156 (51%), Positives = 96/156 (61%)
 Frame = -2

Query: 700 DMVEERKMLRVAEVLREERVQMKLTNAKILFEEKISELEFSTKAAFESALASKKEQQLHM 521
           ++ EERKMLR+AEVLREERVQMKL +AK L EEK+ ELE                     
Sbjct: 74  EIEEERKMLRMAEVLREERVQMKLADAKFLLEEKLLELEV-------------------- 113

Query: 520 VGTVTSHEPTGXXXXXXXXXXXXXNVRSTENKPRASPEAENPHIKRGIKGFVKFPRVVRA 341
             T  + +PT               V S   + RASPE ENPHIKRGIKGFV+FPRVVRA
Sbjct: 114 --TKQTQKPT--------CNDSNAVVPSMAIQRRASPETENPHIKRGIKGFVEFPRVVRA 163

Query: 340 ISSRGRHLGSKVECQKAQXXXXLRQKSPFRTDNLTM 233
           I SR RHLG+K+ECQKAQ    L+QK+P R+++L M
Sbjct: 164 IGSRSRHLGTKLECQKAQLRILLKQKNPIRSNSLIM 199


>ref|XP_002303697.1| predicted protein [Populus trichocarpa] gi|222841129|gb|EEE78676.1|
           predicted protein [Populus trichocarpa]
          Length = 248

 Score =  129 bits (324), Expect = 6e-28
 Identities = 78/172 (45%), Positives = 102/172 (59%), Gaps = 18/172 (10%)
 Frame = -2

Query: 700 DMVEERKMLRVAEVLREERVQMKLTNAKILFEEKISELEFSTKAAF---ESALASKKEQQ 530
           +M EER+M+R+AEVLREERVQMKL  AK+LFEEK+ EL  +T  A     S    +++ Q
Sbjct: 74  EMGEEREMIRMAEVLREERVQMKLAEAKMLFEEKLLELVGTTTQAEPHQNSTSRMEQKSQ 133

Query: 529 LHMVGTVTSHEPTGXXXXXXXXXXXXXNVRSTE---------------NKPRASPEAENP 395
            H    + +   T               + S +                + RASPE ENP
Sbjct: 134 EHKEPEIATPLKTTAILSGQLNSESTGAILSEKPSFNDNTSSISSMVIQRSRASPEPENP 193

Query: 394 HIKRGIKGFVKFPRVVRAISSRGRHLGSKVECQKAQXXXXLRQKSPFRTDNL 239
           HIKRG+KGFV+FPRVVRAI S+ +H G+K+ECQKAQ    L+QKSP R++NL
Sbjct: 194 HIKRGMKGFVEFPRVVRAIGSKNKHRGTKLECQKAQLRILLKQKSPIRSNNL 245


>ref|XP_002297942.1| predicted protein [Populus trichocarpa] gi|222845200|gb|EEE82747.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  127 bits (319), Expect = 2e-27
 Identities = 84/189 (44%), Positives = 103/189 (54%), Gaps = 35/189 (18%)
 Frame = -2

Query: 700 DMVEERKMLRVAEVLREERVQMKLTNAKILFEEKISEL---------------------- 587
           +M EERKMLR+AEVLREERVQMKL  A++LFEEK+ EL                      
Sbjct: 158 EMEEERKMLRMAEVLREERVQMKLAEARMLFEEKLLELGGTTTQTELHHNSASRMEQKYQ 217

Query: 586 -----EFSTKAAFESALASK------KEQQLHMVGTVTSHEPTGXXXXXXXXXXXXXNVR 440
                E ST     + L+SK       E+  +      S E T                 
Sbjct: 218 EDKEAEISTPFKAAAILSSKLNRLVLSEKSCYDNSGADSKESTRVILSEMSSFNDKSRSI 277

Query: 439 STE--NKPRASPEAENPHIKRGIKGFVKFPRVVRAISSRGRHLGSKVECQKAQXXXXLRQ 266
           S+    + RASPE ENPHIKRGIKGFV+FPRV+RAI S+ RH G+K+ECQKAQ    L+Q
Sbjct: 278 SSMVIQRSRASPEPENPHIKRGIKGFVEFPRVIRAIGSKNRHWGTKLECQKAQLRILLKQ 337

Query: 265 KSPFRTDNL 239
           KSP R++NL
Sbjct: 338 KSPIRSNNL 346


>ref|XP_002518920.1| hypothetical protein RCOM_1313640 [Ricinus communis]
           gi|223541907|gb|EEF43453.1| hypothetical protein
           RCOM_1313640 [Ricinus communis]
          Length = 357

 Score =  126 bits (317), Expect = 4e-27
 Identities = 88/199 (44%), Positives = 106/199 (53%), Gaps = 45/199 (22%)
 Frame = -2

Query: 700 DMVEERKMLRVAEVLREERVQMKLTNAKILFEEKISEL---EFSTKAAFESALASKKE-- 536
           ++ EER+MLR+AEVLREERVQMKL  AKILFEEK+ EL   + ST+    S L  ++E  
Sbjct: 156 EIEEERRMLRMAEVLREERVQMKLAEAKILFEEKLLELRGTQHSTEPDESSTLKMEQEQE 215

Query: 535 ------QQLHM---VGTVTSHEPTGXXXXXXXXXXXXXNVRSTEN--------------- 428
                 QQ H    V  + S   T              +    EN               
Sbjct: 216 QEKYKNQQGHKTIPVIAIASKAATNLSGKFNRLFLGDTDKLCDENSCSDSRESTRAVFSG 275

Query: 427 ----------------KPRASPEAENPHIKRGIKGFVKFPRVVRAISSRGRHLGSKVECQ 296
                           + RASPE ENPHIKRGIKGFV+FPRVVRAI S+ RH G+K+ECQ
Sbjct: 276 KSSYNDNLGSVPSMTIQRRASPEPENPHIKRGIKGFVEFPRVVRAIGSKSRHWGTKLECQ 335

Query: 295 KAQXXXXLRQKSPFRTDNL 239
           KAQ    LRQKSP R++NL
Sbjct: 336 KAQLRILLRQKSPIRSNNL 354


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