BLASTX nr result

ID: Coptis21_contig00001876 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001876
         (2489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555886.1| PREDICTED: uncharacterized protein LOC100809...   123   3e-25
ref|XP_003536695.1| PREDICTED: uncharacterized protein LOC100776...   123   3e-25
gb|ACU23136.1| unknown [Glycine max]                                  123   3e-25
ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleop...   123   3e-25
emb|CBI31404.3| unnamed protein product [Vitis vinifera]              122   5e-25

>ref|XP_003555886.1| PREDICTED: uncharacterized protein LOC100809519 [Glycine max]
          Length = 279

 Score =  123 bits (308), Expect = 3e-25
 Identities = 60/101 (59%), Positives = 67/101 (66%)
 Frame = +3

Query: 1512 EIMLERDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXX 1691
            +IM+ERDTGRPRGFGF+TFAD RGMEDAI+EMHGRE+GDRIISVNKAQPKM         
Sbjct: 37   QIMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKM--GGDDVDQ 94

Query: 1692 XXXXXXXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSA 1814
                                   +CFKCGRPGHWAR+CP A
Sbjct: 95   GYRGGYSSGGRGSYGAGDRVGQDDCFKCGRPGHWARDCPLA 135



 Score = 95.9 bits (237), Expect = 5e-17
 Identities = 49/80 (61%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
 Frame = +3

Query: 2013 KYAAGGDRFGSDRY------PQNGYGKDRAYERDAAPRGATERYGSSGGPARYEGGSYRD 2174
            +Y   GDRF SDRY      PQNGYGK+R Y+R   PRG  +RYGS  G  R EG SYR 
Sbjct: 202  RYPTSGDRFASDRYGGGSDYPQNGYGKERGYDRYGGPRGGADRYGSGMG-GRDEGRSYRG 260

Query: 2175 RPGPYDRPSRGGRPSSYERY 2234
            RPGPYDRPSRG RP S +RY
Sbjct: 261  RPGPYDRPSRGSRP-SLDRY 279


>ref|XP_003536695.1| PREDICTED: uncharacterized protein LOC100776333 [Glycine max]
          Length = 279

 Score =  123 bits (308), Expect = 3e-25
 Identities = 60/101 (59%), Positives = 67/101 (66%)
 Frame = +3

Query: 1512 EIMLERDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXX 1691
            +IM+ERDTGRPRGFGF+TFAD RGMEDAI+EMHGRE+GDRIISVNKAQPKM         
Sbjct: 37   QIMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKM--GGDDADQ 94

Query: 1692 XXXXXXXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSA 1814
                                   +CFKCGRPGHWAR+CP A
Sbjct: 95   GYRGGYSSGGRGSYGAGDRVGQDDCFKCGRPGHWARDCPLA 135



 Score = 95.1 bits (235), Expect = 8e-17
 Identities = 49/80 (61%), Positives = 55/80 (68%), Gaps = 6/80 (7%)
 Frame = +3

Query: 2013 KYAAGGDRFGSDRY------PQNGYGKDRAYERDAAPRGATERYGSSGGPARYEGGSYRD 2174
            +Y   GDRF SDRY      PQNGYGK+R Y+R + PRG  +RYGS  G  R EG SYR 
Sbjct: 202  RYPTSGDRFASDRYGAGSDYPQNGYGKERGYDRYSGPRGGADRYGSGMG-GRDEGRSYRG 260

Query: 2175 RPGPYDRPSRGGRPSSYERY 2234
            RPGPYDRPSRG R SS +RY
Sbjct: 261  RPGPYDRPSRGSR-SSLDRY 279


>gb|ACU23136.1| unknown [Glycine max]
          Length = 279

 Score =  123 bits (308), Expect = 3e-25
 Identities = 60/101 (59%), Positives = 67/101 (66%)
 Frame = +3

Query: 1512 EIMLERDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXX 1691
            +IM+ERDTGRPRGFGF+TFAD RGMEDAI+EMHGRE+GDRIISVNKAQPKM         
Sbjct: 37   QIMMERDTGRPRGFGFITFADRRGMEDAIKEMHGREIGDRIISVNKAQPKM--GGDDVDQ 94

Query: 1692 XXXXXXXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSA 1814
                                   +CFKCGRPGHWAR+CP A
Sbjct: 95   GYRGGYSSGGRGSYGAGDRVGQDDCFKCGRPGHWARDCPLA 135



 Score = 94.7 bits (234), Expect = 1e-16
 Identities = 49/80 (61%), Positives = 54/80 (67%), Gaps = 6/80 (7%)
 Frame = +3

Query: 2013 KYAAGGDRFGSDRY------PQNGYGKDRAYERDAAPRGATERYGSSGGPARYEGGSYRD 2174
            +Y   GDRF SDRY      PQNGYGK+R Y+R   PRG  +RYGS  G  R EG SYR 
Sbjct: 202  RYPTSGDRFASDRYGGGSDYPQNGYGKERGYDRYGGPRGGADRYGSGMG-GRDEGRSYRG 260

Query: 2175 RPGPYDRPSRGGRPSSYERY 2234
            RPGPYDRPSRG RP S +RY
Sbjct: 261  RPGPYDRPSRGFRP-SLDRY 279


>ref|XP_002267178.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G [Vitis vinifera]
          Length = 278

 Score =  123 bits (308), Expect = 3e-25
 Identities = 60/101 (59%), Positives = 67/101 (66%)
 Frame = +3

Query: 1512 EIMLERDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXX 1691
            +IMLERDTGRPRGFGF+T+AD RGMEDAIREMHGR+ GDRIISVNKAQPKM         
Sbjct: 37   QIMLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKM--GEDPDHG 94

Query: 1692 XXXXXXXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSA 1814
                                   +CFKCGRPGHWAR+CPS+
Sbjct: 95   YNGGYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSS 135



 Score =  118 bits (295), Expect = 9e-24
 Identities = 56/80 (70%), Positives = 64/80 (80%), Gaps = 6/80 (7%)
 Frame = +3

Query: 2013 KYAAGGDRF------GSDRYPQNGYGKDRAYERDAAPRGATERYGSSGGPARYEGGSYRD 2174
            +YA  GDRF      GSDRYPQNGYGKDR Y+RDAAPRG  +RY + GG AR EG SYR+
Sbjct: 200  RYAPSGDRFSGDRYGGSDRYPQNGYGKDRGYDRDAAPRGGGDRY-AGGGSARNEGRSYRN 258

Query: 2175 RPGPYDRPSRGGRPSSYERY 2234
            RPGPYDRP+RGGRPSS++RY
Sbjct: 259  RPGPYDRPNRGGRPSSFDRY 278


>emb|CBI31404.3| unnamed protein product [Vitis vinifera]
          Length = 294

 Score =  122 bits (306), Expect = 5e-25
 Identities = 60/100 (60%), Positives = 66/100 (66%)
 Frame = +3

Query: 1515 IMLERDTGRPRGFGFVTFADHRGMEDAIREMHGRELGDRIISVNKAQPKMXXXXXXXXXX 1694
            IMLERDTGRPRGFGF+T+AD RGMEDAIREMHGR+ GDRIISVNKAQPKM          
Sbjct: 54   IMLERDTGRPRGFGFITYADRRGMEDAIREMHGRDFGDRIISVNKAQPKM--GEDPDHGY 111

Query: 1695 XXXXXXXXXXXXXXXXXXXXXTECFKCGRPGHWARECPSA 1814
                                  +CFKCGRPGHWAR+CPS+
Sbjct: 112  NGGYSSGGRGSYGGGDRSAGQDDCFKCGRPGHWARDCPSS 151



 Score =  118 bits (295), Expect = 9e-24
 Identities = 56/80 (70%), Positives = 64/80 (80%), Gaps = 6/80 (7%)
 Frame = +3

Query: 2013 KYAAGGDRF------GSDRYPQNGYGKDRAYERDAAPRGATERYGSSGGPARYEGGSYRD 2174
            +YA  GDRF      GSDRYPQNGYGKDR Y+RDAAPRG  +RY + GG AR EG SYR+
Sbjct: 216  RYAPSGDRFSGDRYGGSDRYPQNGYGKDRGYDRDAAPRGGGDRY-AGGGSARNEGRSYRN 274

Query: 2175 RPGPYDRPSRGGRPSSYERY 2234
            RPGPYDRP+RGGRPSS++RY
Sbjct: 275  RPGPYDRPNRGGRPSSFDRY 294


Top