BLASTX nr result

ID: Coptis21_contig00001872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001872
         (1236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276730.2| PREDICTED: la-related protein 6-like [Vitis ...   301   2e-79
ref|NP_001241310.1| uncharacterized protein LOC100807619 [Glycin...   261   2e-67
ref|XP_003542932.1| PREDICTED: uncharacterized protein LOC100788...   259   1e-66
ref|XP_002316726.1| predicted protein [Populus trichocarpa] gi|2...   246   9e-63
ref|XP_004134576.1| PREDICTED: la protein homolog [Cucumis sativus]   237   4e-60

>ref|XP_002276730.2| PREDICTED: la-related protein 6-like [Vitis vinifera]
           gi|297740679|emb|CBI30861.3| unnamed protein product
           [Vitis vinifera]
          Length = 342

 Score =  301 bits (772), Expect = 2e-79
 Identities = 161/315 (51%), Positives = 207/315 (65%)
 Frame = +2

Query: 8   AILTDDLKKKIIRQVEYYFSDENLPTDKFLIKHLKRDKAGFVPVAVVASFRKMKKLVQDK 187
           A+L DD++ KII+QVEYYFSDENLPTDK+L+  LK+DK GFVP+AV+ASFRKMKKL QD 
Sbjct: 34  ALLADDIRGKIIKQVEYYFSDENLPTDKYLMNLLKKDKNGFVPIAVIASFRKMKKLTQDI 93

Query: 188 SFVVAALRESSQLILSSDGRKVKRIRPLPIFEVKDSKSCTVLVENLPEDCSKQHLQXXXX 367
             +VAALRESSQL++SSDG+KVKR+ PL + EVKDSK CTVL+ENLPED S +++Q    
Sbjct: 94  QLIVAALRESSQLVVSSDGKKVKRLHPLSLTEVKDSKICTVLIENLPEDHSTENIQRIFG 153

Query: 368 XXXXXXXXXXRDPHATVDSSKASKAEMAISGKIHALVEYETVKEAEKAVATLNDEKNWRS 547
                      DP+AT +S+K S+ E  ISGK+HA+V+YETV+ AE+AVATLN+E++WR+
Sbjct: 154 AAGNIKKICIHDPYATEESTKDSRVEKLISGKLHAIVDYETVEAAERAVATLNNEQDWRN 213

Query: 548 GMRVELLLKRMGKYGVAKKGWKVVASEKSDNVPASHKVGDEQNVKLLDKNDESPQQEESN 727
           GMRV+LL K+MGKYG  +KGWK    EK+ +V  +H  GDE+N    +++DE+P +E+  
Sbjct: 214 GMRVKLLHKQMGKYGQRRKGWKGSDMEKNSSVGPAHPAGDEEN-NSSERHDETPDEEDGE 272

Query: 728 HLTSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAPIGSGSECFSKPPPGPKMPDXXX 907
           HLT EK                                   G+E  SKPPPGPKMPD   
Sbjct: 273 HLTKEKNGPRGRNRGRSRGQKYRCMNGQGHGTLSS----SYGAE-GSKPPPGPKMPDGTR 327

Query: 908 XXXXXXXXXPPSNQN 952
                    P S  N
Sbjct: 328 GFTMGRGRPPVSRPN 342


>ref|NP_001241310.1| uncharacterized protein LOC100807619 [Glycine max]
           gi|255636971|gb|ACU18818.1| unknown [Glycine max]
          Length = 405

 Score =  261 bits (668), Expect = 2e-67
 Identities = 141/297 (47%), Positives = 194/297 (65%)
 Frame = +2

Query: 8   AILTDDLKKKIIRQVEYYFSDENLPTDKFLIKHLKRDKAGFVPVAVVASFRKMKKLVQDK 187
           A+  +DLK KII+QVEYYFSDENLPTDK+L+  +KR+K GFVPV+V+ASFRK+KKL +D 
Sbjct: 97  AVSLEDLKLKIIKQVEYYFSDENLPTDKYLLGFVKRNKEGFVPVSVIASFRKIKKLTRDH 156

Query: 188 SFVVAALRESSQLILSSDGRKVKRIRPLPIFEVKDSKSCTVLVENLPEDCSKQHLQXXXX 367
           +F+VAAL+ESS L++S DG++VKR+ PL   E +D K  TVLVENLPED S++++Q    
Sbjct: 157 AFIVAALKESSLLVVSGDGKRVKRLNPLRFNESRDHKLYTVLVENLPEDHSRKNIQQIFH 216

Query: 368 XXXXXXXXXXRDPHATVDSSKASKAEMAISGKIHALVEYETVKEAEKAVATLNDEKNWRS 547
                      DPH+T +S++  K EM IS K+HALVEYET++ AEKAVA LN+E++WR+
Sbjct: 217 EAGNIKRITIHDPHSTSESTRHIKQEMLISNKLHALVEYETIEAAEKAVAMLNNEQDWRN 276

Query: 548 GMRVELLLKRMGKYGVAKKGWKVVASEKSDNVPASHKVGDEQNVKLLDKNDESPQQEESN 727
           GMRV+ LLK MG YG  K+ WK   SEK+ +   S + GDE+N    +  +++ ++E+ +
Sbjct: 277 GMRVK-LLKGMGTYGHKKQAWKGSHSEKNSSRHVSEQTGDEENHGSNEHREDAHEEEDGD 335

Query: 728 HLTSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAPIGSGSECFSKPPPGPKMPD 898
           HL+ +K                               P    +E  SKPPPGP+MPD
Sbjct: 336 HLSKDKGGQRYRNQGRSRKHKYRAGNGMGHGS----TPSTHAAEA-SKPPPGPRMPD 387


>ref|XP_003542932.1| PREDICTED: uncharacterized protein LOC100788145 [Glycine max]
          Length = 400

 Score =  259 bits (661), Expect = 1e-66
 Identities = 145/298 (48%), Positives = 196/298 (65%), Gaps = 1/298 (0%)
 Frame = +2

Query: 8   AILTDDLKKKIIRQVEYYFSDENLPTDKFLIKHLKRDKAGFVPVAVVASFRKMKKLVQDK 187
           A+  +DLK KII+Q EYYFSDENLPTDK+L+  +KR+K GFVPV+V+ASFRK+KKL +D 
Sbjct: 93  AVSLEDLKLKIIKQAEYYFSDENLPTDKYLLGFVKRNKEGFVPVSVIASFRKIKKLTRDH 152

Query: 188 SFVVAALRESSQLILSSDGRKVKRIRPLPIFEVKDSKSCTVLVENLPEDCSKQHLQXXXX 367
           +F+VAAL+ESS L++S DGR+VKR+ PL   E +D K  TVLVENLPED SK+++Q    
Sbjct: 153 AFIVAALKESSLLVVSGDGRRVKRLNPLRFNESRDHKLYTVLVENLPEDHSKKNIQQIFH 212

Query: 368 XXXXXXXXXXRDPHATVDSSKA-SKAEMAISGKIHALVEYETVKEAEKAVATLNDEKNWR 544
                      DPH+T +S+K  +K EM IS K+HALVEYET++ AEKAVA LN+E++WR
Sbjct: 213 EAGNIKRITIHDPHSTSESAKQHNKQEMLISNKLHALVEYETMEAAEKAVAMLNNEQDWR 272

Query: 545 SGMRVELLLKRMGKYGVAKKGWKVVASEKSDNVPASHKVGDEQNVKLLDKNDESPQQEES 724
           +GMRV+ LLK MGKYG  K+ WK   SEK+ + P   + GDE+N    D ++++ ++E+ 
Sbjct: 273 NGMRVK-LLKGMGKYGHKKQAWKGHHSEKNSSRP--EQTGDEENHGSNDHHEDTHEEEDG 329

Query: 725 NHLTSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAPIGSGSECFSKPPPGPKMPD 898
           +HL+ +K                              AP    +E  SK PPGP+MPD
Sbjct: 330 DHLSKDKGGQRYRNQGRSRKHKYRAGNGMGHGS----APSTHAAEA-SKSPPGPRMPD 382


>ref|XP_002316726.1| predicted protein [Populus trichocarpa] gi|222859791|gb|EEE97338.1|
           predicted protein [Populus trichocarpa]
          Length = 301

 Score =  246 bits (628), Expect = 9e-63
 Identities = 136/307 (44%), Positives = 182/307 (59%)
 Frame = +2

Query: 38  IIRQVEYYFSDENLPTDKFLIKHLKRDKAGFVPVAVVASFRKMKKLVQDKSFVVAALRES 217
           I+ QVEYYFSDENLPTDK++I  +K++K GFVP+ V+ASFRKMKKL QD +F+VAALRES
Sbjct: 1   IVLQVEYYFSDENLPTDKYMISLIKKNKEGFVPITVIASFRKMKKLTQDSTFIVAALRES 60

Query: 218 SQLILSSDGRKVKRIRPLPIFEVKDSKSCTVLVENLPEDCSKQHLQXXXXXXXXXXXXXX 397
           S L+++SDG+KVKR+ P    EVKD K CTVLVENLPED S  +LQ              
Sbjct: 61  SILVVNSDGKKVKRLDPFHFAEVKDPKLCTVLVENLPEDHSLNNLQRIFGAAGKIKNISI 120

Query: 398 RDPHATVDSSKASKAEMAISGKIHALVEYETVKEAEKAVATLNDEKNWRSGMRVELLLKR 577
           RDP A   S K SK ++ IS K+HA VEY+TV+ AEKAVA LN+E++WR+GMRV+  L +
Sbjct: 121 RDPLAVEKSKKGSKTDILISSKVHAFVEYDTVEAAEKAVAALNNEQDWRNGMRVK-HLNQ 179

Query: 578 MGKYGVAKKGWKVVASEKSDNVPASHKVGDEQNVKLLDKNDESPQQEESNHLTSEKXXXX 757
           M K+G  ++ W+   SEK+     ++  GD +     + +D++P +E+  H++ EK    
Sbjct: 180 MAKHGQRRQVWREPDSEKNRKGRGTNLAGDVEKHDSSEHHDDTPVEEDGEHISKEK---- 235

Query: 758 XXXXXXXXXXXXXXXXXXXXXXXXXYAPIGSGSECFSKPPPGPKMPDXXXXXXXXXXXXP 937
                                    +      +  FSK PPGPKMPD            P
Sbjct: 236 --NGQQGGNRGRSRKNKFRVTNGMGHGTTSYNAVEFSKAPPGPKMPDGTRGFAVGRGRPP 293

Query: 938 PSNQNHE 958
             NQ+ E
Sbjct: 294 IPNQSQE 300


>ref|XP_004134576.1| PREDICTED: la protein homolog [Cucumis sativus]
          Length = 388

 Score =  237 bits (605), Expect = 4e-60
 Identities = 131/330 (39%), Positives = 196/330 (59%), Gaps = 15/330 (4%)
 Frame = +2

Query: 8    AILTDDLKKKIIRQVEYYFSDENLPTDKFLIKHLKRDKAGFVPVAVVASFRKMKKLVQDK 187
            A+L +DLK++I++QVEYYFSDENLP+DK+L+  +K++K G+VP+A++ASF++M+KL  D+
Sbjct: 64   AVLPEDLKQRIVKQVEYYFSDENLPSDKYLLGLVKKNKEGYVPIAIIASFKRMRKLTHDR 123

Query: 188  SFVVAALRESSQLILSSDGRKVKRIRPLPIFEVKDSKSCTVLVENLPEDCSKQHLQXXXX 367
            SF+ AALRESS L++SS+G+KVKR+ P+ + E +D K  T+LVENLPED S+++++    
Sbjct: 124  SFITAALRESSVLVVSSNGKKVKRLHPISLPETRDPKLFTILVENLPEDHSEENMKRIFG 183

Query: 368  XXXXXXXXXXRDPHATVDSSKASKAEMAISGKIHALVEYETVKEAEKAVATLNDEKNWRS 547
                       DPH      K+SK ++ IS K+HALVEYET++ +EKAVATLNDE++WR+
Sbjct: 184  VAGRIRSITICDPHVVDKLGKSSKGDVLISNKLHALVEYETLEASEKAVATLNDEQDWRN 243

Query: 548  GMRVELLLKRMGKYGVAKKGWKVVASEKSDNVPASHKVGDEQNV--KLLDKN-------- 697
            GMRV+  LK M K+G  K+ W+    +K+ +   + + G ++N+  ++ D+N        
Sbjct: 244  GMRVK-PLKLMSKHGQRKQHWRGPEPDKTSSGRIADQNGPDKNIPGRVTDQNGNEEIPNV 302

Query: 698  -----DESPQQEESNHLTSEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYAPIGSGSEC 862
                 D+ P +EE +H   +K                                I      
Sbjct: 303  VNEHHDDVPDEEEGDHQHKDKHGHRGQNQGRTRRQKYKGVNGMGHGTTTSTHHIE----- 357

Query: 863  FSKPPPGPKMPDXXXXXXXXXXXXPPSNQN 952
             SKPPPGPKMPD            P S Q+
Sbjct: 358  LSKPPPGPKMPDGTRGFTMGRGRPPTSTQS 387


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