BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001850
         (1061 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30132.3| unnamed protein product [Vitis vinifera]              439   e-121
ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplast...   439   e-121
sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chlor...   438   e-121
ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus comm...   437   e-120
ref|XP_002323244.1| predicted protein [Populus trichocarpa] gi|2...   437   e-120

>emb|CBI30132.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  439 bits (1130), Expect = e-121
 Identities = 218/248 (87%), Positives = 236/248 (95%)
 Frame = +3

Query: 36   ELVRQKSVLKSSSLPGKLADCSATDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 215
            ELVRQKSVLKSSSLPGKLADCS+T+P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK
Sbjct: 460  ELVRQKSVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 519

Query: 216  ILNIERKDEAAMYKNQEIQNLILALGLGVKGEDFKKEALRYHKIIIMTDADVDGAHIRTL 395
            ILNIERKDEAAMYK++EIQNLIL LGLGVKGEDFKKEALRYHKIII+TDADVDGAHIRTL
Sbjct: 520  ILNIERKDEAAMYKSEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTL 579

Query: 396  LLTFFYRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDEAQLKTLQSTFPSNASYNIQR 575
            LLTFF+RYQ+ALFDEGCIYVGVPPL+KVERGKQ HYCYD+A+LK LQ + P NASY+IQR
Sbjct: 580  LLTFFFRYQRALFDEGCIYVGVPPLFKVERGKQVHYCYDDAELKQLQHSLPPNASYSIQR 639

Query: 576  FKGLGEMMPLQLWETTMDPEKRMLKQLVVEDAAEANMVFSSLMGERVDVRKELITKAAST 755
            FKGLGEMMP+QLWETTMDPE+R+LKQLVVEDAAEAN+VFSSLMG RVD RKELI K+AST
Sbjct: 640  FKGLGEMMPVQLWETTMDPERRLLKQLVVEDAAEANVVFSSLMGARVDFRKELIQKSAST 699

Query: 756  FSLEQLDI 779
              L+QLDI
Sbjct: 700  MKLDQLDI 707


>ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 719

 Score =  439 bits (1130), Expect = e-121
 Identities = 218/248 (87%), Positives = 236/248 (95%)
 Frame = +3

Query: 36   ELVRQKSVLKSSSLPGKLADCSATDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 215
            ELVRQKSVLKSSSLPGKLADCS+T+P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK
Sbjct: 472  ELVRQKSVLKSSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 531

Query: 216  ILNIERKDEAAMYKNQEIQNLILALGLGVKGEDFKKEALRYHKIIIMTDADVDGAHIRTL 395
            ILNIERKDEAAMYK++EIQNLIL LGLGVKGEDFKKEALRYHKIII+TDADVDGAHIRTL
Sbjct: 532  ILNIERKDEAAMYKSEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTL 591

Query: 396  LLTFFYRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDEAQLKTLQSTFPSNASYNIQR 575
            LLTFF+RYQ+ALFDEGCIYVGVPPL+KVERGKQ HYCYD+A+LK LQ + P NASY+IQR
Sbjct: 592  LLTFFFRYQRALFDEGCIYVGVPPLFKVERGKQVHYCYDDAELKQLQHSLPPNASYSIQR 651

Query: 576  FKGLGEMMPLQLWETTMDPEKRMLKQLVVEDAAEANMVFSSLMGERVDVRKELITKAAST 755
            FKGLGEMMP+QLWETTMDPE+R+LKQLVVEDAAEAN+VFSSLMG RVD RKELI K+AST
Sbjct: 652  FKGLGEMMPVQLWETTMDPERRLLKQLVVEDAAEANVVFSSLMGARVDFRKELIQKSAST 711

Query: 756  FSLEQLDI 779
              L+QLDI
Sbjct: 712  MKLDQLDI 719


>sp|Q5YLB4.1|GYRB_NICBE RecName: Full=DNA gyrase subunit B, chloroplastic/mitochondrial;
            Flags: Precursor gi|38017095|gb|AAR07943.1| DNA gyrase B
            subunit [Nicotiana benthamiana]
          Length = 731

 Score =  438 bits (1127), Expect = e-121
 Identities = 217/248 (87%), Positives = 236/248 (95%)
 Frame = +3

Query: 36   ELVRQKSVLKSSSLPGKLADCSATDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 215
            ELVRQKSVLKSSSLPGKLADCSAT+P E+EIFIVEGDSAGGSAKQGRDRRFQAILPLRGK
Sbjct: 484  ELVRQKSVLKSSSLPGKLADCSATNPEEAEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 543

Query: 216  ILNIERKDEAAMYKNQEIQNLILALGLGVKGEDFKKEALRYHKIIIMTDADVDGAHIRTL 395
            ILNIERKDEAAMYKN+EIQNLIL LGLGVKGEDFKKEALRYHKIII+TDADVDGAHIRTL
Sbjct: 544  ILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTL 603

Query: 396  LLTFFYRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDEAQLKTLQSTFPSNASYNIQR 575
            LLTFF+RYQ+ALF+EGCIYVGVPPLYKVERGKQ +YCYD+A+LK +Q +FPSNASYNIQR
Sbjct: 604  LLTFFFRYQRALFEEGCIYVGVPPLYKVERGKQVYYCYDDAELKKVQRSFPSNASYNIQR 663

Query: 576  FKGLGEMMPLQLWETTMDPEKRMLKQLVVEDAAEANMVFSSLMGERVDVRKELITKAAST 755
            FKGLGEMMP QLWETTM+PE R+LKQLVVEDAAEAN+VFSSLMG RVD+RK+LI  +AS 
Sbjct: 664  FKGLGEMMPAQLWETTMNPETRLLKQLVVEDAAEANVVFSSLMGSRVDIRKQLIQNSASM 723

Query: 756  FSLEQLDI 779
             +LEQLDI
Sbjct: 724  MNLEQLDI 731


>ref|XP_002522164.1| DNA gyrase subunit B, putative [Ricinus communis]
            gi|223538602|gb|EEF40205.1| DNA gyrase subunit B,
            putative [Ricinus communis]
          Length = 732

 Score =  437 bits (1125), Expect = e-120
 Identities = 217/248 (87%), Positives = 236/248 (95%)
 Frame = +3

Query: 36   ELVRQKSVLKSSSLPGKLADCSATDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 215
            ELVRQKSVL++SSLPGKLADCS+T+P ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK
Sbjct: 485  ELVRQKSVLRTSSLPGKLADCSSTNPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 544

Query: 216  ILNIERKDEAAMYKNQEIQNLILALGLGVKGEDFKKEALRYHKIIIMTDADVDGAHIRTL 395
            ILNIERKDEAAMYKN+EIQNLIL LGLGVKGEDFKKEALRYHKIII+TDADVDGAHIRTL
Sbjct: 545  ILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKEALRYHKIIILTDADVDGAHIRTL 604

Query: 396  LLTFFYRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDEAQLKTLQSTFPSNASYNIQR 575
            LLTFF+RYQKALF+EGCIYVGVPPLYKVERGKQ +YCYDEA+LK L+S+FP NASYNIQR
Sbjct: 605  LLTFFFRYQKALFEEGCIYVGVPPLYKVERGKQVYYCYDEAELKKLRSSFPQNASYNIQR 664

Query: 576  FKGLGEMMPLQLWETTMDPEKRMLKQLVVEDAAEANMVFSSLMGERVDVRKELITKAAST 755
            FKGLGEMMPLQLWETTMDPE+R+LKQLVVEDAAEAN+VFSSLMG RVDVRKELI  +A  
Sbjct: 665  FKGLGEMMPLQLWETTMDPEQRLLKQLVVEDAAEANVVFSSLMGARVDVRKELIQSSARA 724

Query: 756  FSLEQLDI 779
             +++ LDI
Sbjct: 725  VNIDLLDI 732


>ref|XP_002323244.1| predicted protein [Populus trichocarpa] gi|222867874|gb|EEF05005.1|
            predicted protein [Populus trichocarpa]
          Length = 700

 Score =  437 bits (1124), Expect = e-120
 Identities = 216/248 (87%), Positives = 235/248 (94%)
 Frame = +3

Query: 36   ELVRQKSVLKSSSLPGKLADCSATDPAESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 215
            ELVRQKSVLKSSSLPGKLADCS+TDP ESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK
Sbjct: 453  ELVRQKSVLKSSSLPGKLADCSSTDPEESEIFIVEGDSAGGSAKQGRDRRFQAILPLRGK 512

Query: 216  ILNIERKDEAAMYKNQEIQNLILALGLGVKGEDFKKEALRYHKIIIMTDADVDGAHIRTL 395
            ILNIER+DEAAMYKN+EIQNLIL LGLGVKGEDFKK+ALRYHKIII+TDADVDGAHIRTL
Sbjct: 513  ILNIERRDEAAMYKNEEIQNLILGLGLGVKGEDFKKDALRYHKIIILTDADVDGAHIRTL 572

Query: 396  LLTFFYRYQKALFDEGCIYVGVPPLYKVERGKQAHYCYDEAQLKTLQSTFPSNASYNIQR 575
            LLTFF+RYQ+ALFDEGCIYVGVPPLYKVERGKQA+YC+D+A+LK +Q +FP NASYNIQR
Sbjct: 573  LLTFFFRYQRALFDEGCIYVGVPPLYKVERGKQAYYCFDDAELKKIQRSFPQNASYNIQR 632

Query: 576  FKGLGEMMPLQLWETTMDPEKRMLKQLVVEDAAEANMVFSSLMGERVDVRKELITKAAST 755
            FKGLGEMMP QLWETTMDPE+R+LKQLVVEDAAEAN+VFSSLMG RVD RKELI  AAS 
Sbjct: 633  FKGLGEMMPAQLWETTMDPERRVLKQLVVEDAAEANIVFSSLMGTRVDFRKELIQNAASM 692

Query: 756  FSLEQLDI 779
             +++ LDI
Sbjct: 693  INVDHLDI 700