BLASTX nr result

ID: Coptis21_contig00001845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001845
         (1655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002444513.1| hypothetical protein SORBIDRAFT_07g023090 [S...   154   9e-35
ref|XP_002466925.1| hypothetical protein SORBIDRAFT_01g016800 [S...   149   2e-33
gb|EEC67236.1| hypothetical protein OsI_34166 [Oryza sativa Indi...   144   7e-32
ref|NP_001056081.2| Os05g0522400 [Oryza sativa Japonica Group] g...   141   4e-31
emb|CAD40681.2| OSJNBb0118P14.3 [Oryza sativa Japonica Group]         141   4e-31

>ref|XP_002444513.1| hypothetical protein SORBIDRAFT_07g023090 [Sorghum bicolor]
            gi|241940863|gb|EES14008.1| hypothetical protein
            SORBIDRAFT_07g023090 [Sorghum bicolor]
          Length = 861

 Score =  154 bits (388), Expect = 9e-35
 Identities = 90/283 (31%), Positives = 147/283 (51%), Gaps = 6/283 (2%)
 Frame = +3

Query: 3    SWMNFLDIMAPHLQ-KHPDPLCIISDRQKGLREAVATIFPNCNQRFCFRHMVKNMKTRFR 179
            +W  FL+ +   LQ  +  P  I++D+QKGL  AV  +FP    RFC RH+  N   +++
Sbjct: 398  TWKWFLETLKTDLQIDNTFPWTIMTDKQKGLIPAVKQVFPESEHRFCVRHLYANFNEKYK 457

Query: 180  GVDVKA--WDAAKTFSGSNFTRLMQVLRAREARAHDYLLNEDPRVWARSRFDIVTKSDHL 353
            G  +K   W  A++ S   +TR M+ ++A    A+ +L    P  W R+ F    K D L
Sbjct: 458  GEILKKQLWACARSSSVQQWTRNMEKMKALNEDAYKWLEKMPPNTWVRAYFSEFPKCDIL 517

Query: 354  SNNFSEAWNSFILEARDKPIVKMVCRIMIMQMTILYDRKQKGMELGDD---ELVPRVSRL 524
             NN  E +NS+ILEAR+ PI+ M+ RI    MT  Y+++Q   ELG D      P++ + 
Sbjct: 518  LNNNCEVFNSYILEARELPILSMLERIKCQLMTRHYNKQQ---ELGKDIQGAFCPKIRKK 574

Query: 525  IKKREDQLLNYTYAGSDNNTYLVTHQYGHHETVNLVNKSCTCNEWQVTGIPCIHAICIIK 704
            + K   +  N  +A              +   V++  ++C C  WQ+TG+PC HAI  ++
Sbjct: 575  VAKNA-EFANMCFAAPSGQGVFQVQIKDYQHIVDINARTCDCRRWQLTGVPCCHAISCLR 633

Query: 705  PKRLLYAEFCSHYFTGRAYKNAYSGSIRPMLHEDDWLEVHPNE 833
             +R+      ++ ++  AYKNAY  +I P   + +W +++  E
Sbjct: 634  SERIPPESVLANCYSVEAYKNAYGFNIWPCKDKTEWEKMNGPE 676


>ref|XP_002466925.1| hypothetical protein SORBIDRAFT_01g016800 [Sorghum bicolor]
            gi|241920779|gb|EER93923.1| hypothetical protein
            SORBIDRAFT_01g016800 [Sorghum bicolor]
          Length = 995

 Score =  149 bits (376), Expect = 2e-33
 Identities = 85/280 (30%), Positives = 142/280 (50%), Gaps = 3/280 (1%)
 Frame = +3

Query: 3    SWMNFLDIMAPHLQ-KHPDPLCIISDRQKGLREAVATIFPNCNQRFCFRHMVKNMKTRFR 179
            +W  FL+ +   LQ  +  P  I++D+QKGL   V  +FP    RFC RH+  N   +F+
Sbjct: 509  TWKWFLESLKADLQIDNTFPWTIMTDKQKGLIPTVKQVFPESEHRFCVRHLYANFNEKFK 568

Query: 180  GVDVKA--WDAAKTFSGSNFTRLMQVLRAREARAHDYLLNEDPRVWARSRFDIVTKSDHL 353
            G  +K   W  A++ S   +TR M+ ++     A+ ++    P  W R+ F    K D L
Sbjct: 569  GEILKKQLWACARSSSVQQWTRNMEKMKDLNVDAYQWIEKMPPNTWLRAYFSEFPKCDIL 628

Query: 354  SNNFSEAWNSFILEARDKPIVKMVCRIMIMQMTILYDRKQKGMELGDDELVPRVSRLIKK 533
             NN  E +NS+ILEARD PI+ M+ RI    MT  Y ++Q+  +       P++ + + K
Sbjct: 629  LNNNCEVFNSYILEARDLPILSMLERIKCPLMTRHYSKQQEIGKHIQGAFCPKIRKKVAK 688

Query: 534  REDQLLNYTYAGSDNNTYLVTHQYGHHETVNLVNKSCTCNEWQVTGIPCIHAICIIKPKR 713
               +  N  +A              +   V++  ++C C  WQ+TG+PC HAI  ++ +R
Sbjct: 689  NA-EFANMCFASPSGQGVFQVQIKDYQHIVDINARTCDCRRWQLTGVPCCHAISCLRSER 747

Query: 714  LLYAEFCSHYFTGRAYKNAYSGSIRPMLHEDDWLEVHPNE 833
            +      ++ ++  A+KNAY  +I P   + +W +V+  E
Sbjct: 748  IPPESVLANCYSVEAFKNAYGFNIWPCKDKTEWAKVNGPE 787


>gb|EEC67236.1| hypothetical protein OsI_34166 [Oryza sativa Indica Group]
          Length = 672

 Score =  144 bits (363), Expect = 7e-32
 Identities = 111/356 (31%), Positives = 171/356 (48%), Gaps = 16/356 (4%)
 Frame = +3

Query: 3    SWMNFLDIMAPHLQKHPD--PLCIISDRQKGLREAVATIFPNCNQRFCFRHMVKNMKTR- 173
            +W+ FL+ +   L  + D   L I+S+RQ GL  A+ ++FP+C QR+C RH+ +N  T  
Sbjct: 260  NWIWFLNQLKYALDDNGDCARLTIMSERQMGLLHAIKSVFPDCAQRYCKRHLYQNFCTAG 319

Query: 174  FRGVDVKAW--DAAKTFSGSNFTRLMQVLRAREARAHDYLLNEDPRVWARSRFDIVTKSD 347
            ++G D+K     A   ++ S+F   M+ L+   A A D+L     + WAR  FD   K+D
Sbjct: 320  YKGGDLKVLMDQAVYAYTKSDFNIAMEELKKENANAWDWLNKIPHKHWARHAFDSRCKTD 379

Query: 348  HLSNNFSEAWNSFILEARDKPIVKMVCRIMIMQMTILYDRKQKGMELGDDELVPRVSRLI 527
             + NN SEA+N++I+ +RDKPIV M+  I    M    D K++G+     E+ P     I
Sbjct: 380  LVVNNLSEAFNNYIIGSRDKPIVTMLEMIRTKLMEKCND-KREGVAAAKWEITP---HYI 435

Query: 528  KKREDQLLNYTYAG---SDNNTYLVT-HQYGHHETVNLVNKSCTCNEWQVTGIPCIHAIC 695
            +K E +  N  Y     +    + V+  +Y +   V+L N++C C +W VTGIPC HAI 
Sbjct: 436  EKLELEKTNSRYCRPVCAGRGIWQVSCGEYTY--AVHLENRTCGCFKWDVTGIPCNHAIS 493

Query: 696  IIKPKRLLYAEFCSHYFTGRAYKNAYSGSIRPMLHEDDWL-----EVHPNEFVFXXXXXX 860
             I   R    ++ + +F    Y+ AY   I P+  E DW+     ++ P +F        
Sbjct: 494  AIYKLRQYPEDYVNDFFKKATYEKAYQHLIYPVPGEHDWIRTTTPDIDPPKFNKHPGRPK 553

Query: 861  XXXXXXXXXXXXEDETVNIT--RCSRCGIFGHNVRSYQNEEAGTVRARGRGGKSGR 1022
                            V +T   CS C   GH   S        ++ R R  KS R
Sbjct: 554  KSRRKSAGEETQHSGRVRMTTITCSNCKNHGHKYISCPQPLRPDLKIRKRKYKSNR 609


>ref|NP_001056081.2| Os05g0522400 [Oryza sativa Japonica Group]
            gi|255676498|dbj|BAF17995.2| Os05g0522400 [Oryza sativa
            Japonica Group]
          Length = 649

 Score =  141 bits (356), Expect = 4e-31
 Identities = 92/326 (28%), Positives = 150/326 (46%), Gaps = 6/326 (1%)
 Frame = +3

Query: 60   LCIISDRQKGLREAVATIFPNCNQRFCFRHMVKNMKTRFRG--VDVKAWDAAKTFSGSNF 233
            L I +D  KG+  AV  ++P    R C RH+ KNMK ++ G       W AAK+F+   F
Sbjct: 311  LVISTDAGKGIEGAVDDVYPGVEHRECMRHLWKNMKKKYHGPLFAQNMWAAAKSFTNVKF 370

Query: 234  TRLMQVLRAREARAHDYLLNEDPRVWARSRFDIVTKSDHLSNNFSEAWNSFILEARDKPI 413
            T  M  ++ R   A  +L +  P +W+RS+F    K D+++NN SE +NS++ + +D+ I
Sbjct: 371  TYHMDKIKERCPEALTWLDDNHPYIWSRSKFYEECKVDYINNNLSECFNSWVSKIKDRQI 430

Query: 414  VKMVCRIMIMQMTILYDRKQKGMELGDDELVPRVSRLIKKREDQLLNYTYAGSDNNTYLV 593
            V +   I  M ++    R +   ++ D+ ++P ++  +  +   L N+      + T  V
Sbjct: 431  VDLHDTIRKMIISKFVSRAKLACKM-DERIIPSITNTLNAKSKTLKNHEVLICGSGTVEV 489

Query: 594  THQYGHHETVNLVNKSCTCNEWQVTGIPCIHAICIIKP--KRLLYAEFCSHYFTGRAYKN 767
            T     H  VNL  ++CTC  WQV+G PC HA+  I    + +   +F    F+    K 
Sbjct: 490  TVGTITH-AVNLKERTCTCRAWQVSGKPCDHALAFIAKLNREVQMDDFVDKCFSIEMLKM 548

Query: 768  AYSGSIRPMLHEDDWLEVHPNEFVFXXXXXXXXXXXXXXXXXXEDE--TVNITRCSRCGI 941
            AY+G   PM  +D+W  V     +                    DE  T    +CS C  
Sbjct: 549  AYAGQFNPMASKDEWAHVDLGYKIKKPRLRRKPGRPRVARIRASDEASTSKRKKCSECHE 608

Query: 942  FGHNVRSYQNEEAGTVRARGRGGKSG 1019
             GH  +  Q     + + +    +SG
Sbjct: 609  LGHTAKHCQGGLTASQKRKLSSSQSG 634


>emb|CAD40681.2| OSJNBb0118P14.3 [Oryza sativa Japonica Group]
          Length = 939

 Score =  141 bits (356), Expect = 4e-31
 Identities = 89/283 (31%), Positives = 140/283 (49%), Gaps = 8/283 (2%)
 Frame = +3

Query: 3    SWMNFLDIMAPHLQ-KHPDPLCIISDRQKGLREAVATIFPNCNQRFCFRHMVKNMKTRFR 179
            SW  FLD +   L  ++     +++DRQKGL  AV   F +  QRFC RH+ +N +   +
Sbjct: 489  SWSWFLDTLKKDLGIENTSAWTVMTDRQKGLVPAVRREFSDAEQRFCVRHLYQNFQVLHK 548

Query: 180  GVDVK--AWDAAKTFSGSNFTRLMQVLRAREARAHDYLLNEDPRVWARSRFDIVTKSDHL 353
            G  +K   W  A++ +   +   M+ ++A  + A+ YL    P  W R+ F    K D L
Sbjct: 549  GETLKNQLWAIARSSTVPEWNANMEKMKALSSEAYKYLEEIPPNQWCRAFFSDFPKCDIL 608

Query: 354  SNNFSEAWNSFILEARDKPIVKMVCRIMIMQMTILYDRKQKGMELGDDELVPRVSRLIKK 533
             NN SE +N +IL+AR+ PI+ M+ RI    M  LY ++++        + P++ R ++K
Sbjct: 609  LNNNSEVFNKYILDAREMPILSMLERIRNQIMNRLYTKQKELERNWPCGICPKIKRKVEK 668

Query: 534  REDQLLNYTYAGSDNNTYLVTHQYGHHETVNLVNKSCTCNEWQVTGIPCIHAICIIKPKR 713
               ++ N  Y              G    V L  K C C  WQ+TGIPC HAI  ++ +R
Sbjct: 669  -NTEMANTCYVFPAGMGAFQVSDIGSQYIVELNVKRCDCRRWQLTGIPCNHAISCLRHER 727

Query: 714  LLYAEFCSHYFTGRAYKNAYSGSIRPMLHEDDW-----LEVHP 827
            +   +  S  ++ R Y+ AYS +I P+     W     +EV P
Sbjct: 728  IKPEDVVSFCYSTRCYEQAYSYNIMPLRDSIHWEKMQGIEVKP 770


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