BLASTX nr result

ID: Coptis21_contig00001844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001844
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146043.1| PREDICTED: uncharacterized protein At4g28440...    73   3e-11
ref|XP_003632005.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    69   4e-10
ref|XP_002276699.1| PREDICTED: uncharacterized protein At4g28440...    69   4e-10
emb|CBI21894.3| unnamed protein product [Vitis vinifera]               69   4e-10
emb|CAN80586.1| hypothetical protein VITISV_021819 [Vitis vinifera]    69   4e-10

>ref|XP_004146043.1| PREDICTED: uncharacterized protein At4g28440-like [Cucumis sativus]
           gi|449520479|ref|XP_004167261.1| PREDICTED:
           uncharacterized protein At4g28440-like [Cucumis sativus]
          Length = 154

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/42 (80%), Positives = 38/42 (90%)
 Frame = +3

Query: 288 RKAVFIKVEELKPGTNGHNLNVKVVSSNTVLQKGRAASQHLR 413
           RK VF+K+E+LKPGTNGH L VKVVSSNTVLQKGR+ SQHLR
Sbjct: 26  RKPVFVKIEQLKPGTNGHTLIVKVVSSNTVLQKGRSVSQHLR 67


>ref|XP_003632005.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           At4g28440-like [Vitis vinifera]
          Length = 158

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = +3

Query: 285 KRKAVFIKVEELKPGTNGHNLNVKVVSSNTVLQKGRAASQHLR 413
           KRK VF KV++LKPGT GH L VKVVSS TVLQKGR+ SQHLR
Sbjct: 29  KRKPVFTKVDQLKPGTGGHTLTVKVVSSKTVLQKGRSVSQHLR 71


>ref|XP_002276699.1| PREDICTED: uncharacterized protein At4g28440-like [Vitis vinifera]
          Length = 166

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = +3

Query: 285 KRKAVFIKVEELKPGTNGHNLNVKVVSSNTVLQKGRAASQHLR 413
           KRK VF KV++LKPGT GH L VKVVSS TVLQKGR+ SQHLR
Sbjct: 37  KRKPVFTKVDQLKPGTGGHTLTVKVVSSKTVLQKGRSVSQHLR 79


>emb|CBI21894.3| unnamed protein product [Vitis vinifera]
          Length = 148

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = +3

Query: 285 KRKAVFIKVEELKPGTNGHNLNVKVVSSNTVLQKGRAASQHLR 413
           KRK VF KV++LKPGT GH L VKVVSS TVLQKGR+ SQHLR
Sbjct: 19  KRKPVFTKVDQLKPGTGGHTLTVKVVSSKTVLQKGRSVSQHLR 61


>emb|CAN80586.1| hypothetical protein VITISV_021819 [Vitis vinifera]
          Length = 231

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/43 (76%), Positives = 36/43 (83%)
 Frame = +3

Query: 285 KRKAVFIKVEELKPGTNGHNLNVKVVSSNTVLQKGRAASQHLR 413
           KRK VF KV++LKPGT GH L VKVVSS TVLQKGR+ SQHLR
Sbjct: 29  KRKXVFTKVDQLKPGTGGHTLTVKVVSSKTVLQKGRSVSQHLR 71


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