BLASTX nr result

ID: Coptis21_contig00001830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001830
         (995 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR16195.1| unknown [Picea sitchensis]                             318   2e-84
ref|XP_002510329.1| multidrug resistance pump, putative [Ricinus...   306   5e-81
ref|XP_003550360.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   300   5e-79
ref|XP_003550359.1| PREDICTED: protein TRANSPARENT TESTA 12-like...   300   5e-79
ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus...   300   5e-79

>gb|ABR16195.1| unknown [Picea sitchensis]
          Length = 500

 Score =  318 bits (814), Expect = 2e-84
 Identities = 155/259 (59%), Positives = 190/259 (73%)
 Frame = +2

Query: 5    LNFSWWVMVLAQLIYILSGACKDTWSGFSWLAFADLSGFVGLSCASAVMLCLEYWYVMVL 184
            LN SWW++VLAQ+ Y+ SGAC+D W+GFSW AF++L  FV LS AS VMLCLE WY+ +L
Sbjct: 239  LNLSWWIIVLAQIGYVFSGACRDAWAGFSWSAFSNLGAFVRLSLASGVMLCLEAWYLYLL 298

Query: 185  ILLAGLLKNPEITVDAASICMNLEGWIYMIPLGFMAAVSVRVSNELGAGNPRAVRFSVWV 364
            ILLAG LKNP I VDA SICMNL GW +MI +GF  A+SVRVSNELGAG PRA +FSV V
Sbjct: 299  ILLAGYLKNPTIAVDAISICMNLMGWEFMIAIGFNIAISVRVSNELGAGRPRAAKFSVIV 358

Query: 365  MTTMSXXXXXXXXXXXXTTRKDFPAVFTENKLVMAEVSRVALLLCASVFLCSIQPVLSGV 544
            +   +             TR +F   FT++K+VM+ V+++A LL  ++ L S+QPVLSGV
Sbjct: 359  VVGTTFLVGVVLMAIIFITRNEFAVAFTDSKVVMSAVAQLAPLLAFTMLLNSVQPVLSGV 418

Query: 545  AIGAGWQNLVAYINVACYYLLGFPIGALLGYKFNFGLPGLWGGIISGVGLQTIILVIVTL 724
            AIGAGWQ LVAYIN+ACYYL G P+G LLGY F+ G+ G+W G+ISG  LQTIIL I+T 
Sbjct: 419  AIGAGWQALVAYINLACYYLFGVPLGCLLGYYFDLGVEGIWAGMISGTLLQTIILCIITY 478

Query: 725  RTDWEKEAKLAAERISTWG 781
            RT W KEA  A  RI+ WG
Sbjct: 479  RTKWNKEANQAKARITLWG 497


>ref|XP_002510329.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223551030|gb|EEF52516.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 483

 Score =  306 bits (784), Expect = 5e-81
 Identities = 149/260 (57%), Positives = 187/260 (71%)
 Frame = +2

Query: 2   TLNFSWWVMVLAQLIYILSGACKDTWSGFSWLAFADLSGFVGLSCASAVMLCLEYWYVMV 181
           TLN SWW++V+AQL+YI        WSGF+WLAFADL GFV LS ASAVMLCLE+WY+M+
Sbjct: 218 TLNTSWWIIVIAQLLYIFITKSDGAWSGFTWLAFADLGGFVKLSLASAVMLCLEFWYLMI 277

Query: 182 LILLAGLLKNPEITVDAASICMNLEGWIYMIPLGFMAAVSVRVSNELGAGNPRAVRFSVW 361
           L+++ G L NP I VDA SICMNL+GW  MI LGF AA+SVRVSNELGAGN R  ++SV 
Sbjct: 278 LVVITGRLPNPLIPVDAISICMNLQGWDAMIALGFNAAISVRVSNELGAGNSRRAKYSVK 337

Query: 362 VMTTMSXXXXXXXXXXXXTTRKDFPAVFTENKLVMAEVSRVALLLCASVFLCSIQPVLSG 541
           V++  S             TR  FP +FT +  V  E +++A+LL  +V L S+QPVLSG
Sbjct: 338 VVSVTSISIGVVCMALVFATRDYFPYLFTTSDAVAKETTKLAVLLGITVLLNSLQPVLSG 397

Query: 542 VAIGAGWQNLVAYINVACYYLLGFPIGALLGYKFNFGLPGLWGGIISGVGLQTIILVIVT 721
           VA+GAGWQ+LVAYIN+ CYY++G P G LLG+ F FG  G+W G+I G+ LQTIIL+IVT
Sbjct: 398 VAVGAGWQSLVAYINIGCYYVVGLPAGILLGFTFGFGAMGVWSGMIGGICLQTIILIIVT 457

Query: 722 LRTDWEKEAKLAAERISTWG 781
             T+W KEA+ A  R+  WG
Sbjct: 458 SITNWNKEAEEAESRVKKWG 477


>ref|XP_003550360.1| PREDICTED: protein TRANSPARENT TESTA 12-like isoform 2 [Glycine
           max]
          Length = 487

 Score =  300 bits (767), Expect = 5e-79
 Identities = 144/260 (55%), Positives = 187/260 (71%)
 Frame = +2

Query: 2   TLNFSWWVMVLAQLIYILSGACKDTWSGFSWLAFADLSGFVGLSCASAVMLCLEYWYVMV 181
           TLN SWWV+V+AQL+YI        WSGF+WLAF+DL GFV LS ASAVMLCLE+WY+M+
Sbjct: 217 TLNTSWWVIVIAQLLYIFITKSDGAWSGFTWLAFSDLFGFVKLSLASAVMLCLEFWYLMI 276

Query: 182 LILLAGLLKNPEITVDAASICMNLEGWIYMIPLGFMAAVSVRVSNELGAGNPRAVRFSVW 361
           L+++ G L+NP I VDA SICMN+ GW  MI +GF AA+SVRVSNELGAG+ +A +FSVW
Sbjct: 277 LVVITGRLENPLIPVDAISICMNINGWDAMIAIGFNAAISVRVSNELGAGDFKAAKFSVW 336

Query: 362 VMTTMSXXXXXXXXXXXXTTRKDFPAVFTENKLVMAEVSRVALLLCASVFLCSIQPVLSG 541
           V++  S             T+  FP +FT +  V  E +R++ LL  +V L S+QPVLSG
Sbjct: 337 VVSITSVSIGVVVMIGVLLTKDYFPYLFTTSVPVANETTRLSALLAVTVLLNSLQPVLSG 396

Query: 542 VAIGAGWQNLVAYINVACYYLLGFPIGALLGYKFNFGLPGLWGGIISGVGLQTIILVIVT 721
           VA+GAGWQ+LVAYIN+ CYYL+G P G +LG+K   G  G+W G+I+G+ LQT IL+IVT
Sbjct: 397 VAVGAGWQSLVAYINIVCYYLVGLPAGIILGFKLGLGAEGIWSGMIAGIVLQTTILIIVT 456

Query: 722 LRTDWEKEAKLAAERISTWG 781
              +W+KEA+ A  R+  WG
Sbjct: 457 SIRNWKKEAEEAESRVRKWG 476


>ref|XP_003550359.1| PREDICTED: protein TRANSPARENT TESTA 12-like isoform 1 [Glycine
           max]
          Length = 483

 Score =  300 bits (767), Expect = 5e-79
 Identities = 144/260 (55%), Positives = 187/260 (71%)
 Frame = +2

Query: 2   TLNFSWWVMVLAQLIYILSGACKDTWSGFSWLAFADLSGFVGLSCASAVMLCLEYWYVMV 181
           TLN SWWV+V+AQL+YI        WSGF+WLAF+DL GFV LS ASAVMLCLE+WY+M+
Sbjct: 217 TLNTSWWVIVIAQLLYIFITKSDGAWSGFTWLAFSDLFGFVKLSLASAVMLCLEFWYLMI 276

Query: 182 LILLAGLLKNPEITVDAASICMNLEGWIYMIPLGFMAAVSVRVSNELGAGNPRAVRFSVW 361
           L+++ G L+NP I VDA SICMN+ GW  MI +GF AA+SVRVSNELGAG+ +A +FSVW
Sbjct: 277 LVVITGRLENPLIPVDAISICMNINGWDAMIAIGFNAAISVRVSNELGAGDFKAAKFSVW 336

Query: 362 VMTTMSXXXXXXXXXXXXTTRKDFPAVFTENKLVMAEVSRVALLLCASVFLCSIQPVLSG 541
           V++  S             T+  FP +FT +  V  E +R++ LL  +V L S+QPVLSG
Sbjct: 337 VVSITSVSIGVVVMIGVLLTKDYFPYLFTTSVPVANETTRLSALLAVTVLLNSLQPVLSG 396

Query: 542 VAIGAGWQNLVAYINVACYYLLGFPIGALLGYKFNFGLPGLWGGIISGVGLQTIILVIVT 721
           VA+GAGWQ+LVAYIN+ CYYL+G P G +LG+K   G  G+W G+I+G+ LQT IL+IVT
Sbjct: 397 VAVGAGWQSLVAYINIVCYYLVGLPAGIILGFKLGLGAEGIWSGMIAGIVLQTTILIIVT 456

Query: 722 LRTDWEKEAKLAAERISTWG 781
              +W+KEA+ A  R+  WG
Sbjct: 457 SIRNWKKEAEEAESRVRKWG 476


>ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223541763|gb|EEF43311.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 496

 Score =  300 bits (767), Expect = 5e-79
 Identities = 146/258 (56%), Positives = 182/258 (70%)
 Frame = +2

Query: 8   NFSWWVMVLAQLIYILSGACKDTWSGFSWLAFADLSGFVGLSCASAVMLCLEYWYVMVLI 187
           N SW V+VLAQ++Y++SG   + W+GFS  AF  L+GFV LS ASAVMLCLE WY   +I
Sbjct: 223 NISWLVIVLAQIVYVVSGFFPEAWTGFSCSAFKSLAGFVKLSLASAVMLCLELWYFTAVI 282

Query: 188 LLAGLLKNPEITVDAASICMNLEGWIYMIPLGFMAAVSVRVSNELGAGNPRAVRFSVWVM 367
           L+ G LKNPEI VDA SICMNL+ W  MI LGF AA+SVRVSNELGAGNP+A +FSV V 
Sbjct: 283 LMVGWLKNPEIAVDAISICMNLQLWTLMIALGFNAAISVRVSNELGAGNPKAAKFSVMVT 342

Query: 368 TTMSXXXXXXXXXXXXTTRKDFPAVFTENKLVMAEVSRVALLLCASVFLCSIQPVLSGVA 547
              S             T+ +FP VFT    VM E S++   L A++FL SIQPVL GVA
Sbjct: 343 VLTSTILGVLFTAVILATKNEFPKVFTGKPAVMQEASKLGYFLAATIFLNSIQPVLHGVA 402

Query: 548 IGAGWQNLVAYINVACYYLLGFPIGALLGYKFNFGLPGLWGGIISGVGLQTIILVIVTLR 727
           +GAGWQ  VA IN+ACYY++G PIGA+LGYKF  G+ G+W G+++G  LQ +IL+ + LR
Sbjct: 403 VGAGWQLSVALINIACYYIVGLPIGAVLGYKFKLGVKGIWSGMLAGCVLQIVILIFIMLR 462

Query: 728 TDWEKEAKLAAERISTWG 781
           T+W KEA  + ER+ TWG
Sbjct: 463 TNWNKEAVQSEERMRTWG 480


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