BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001828
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [...   448   e-123
ref|XP_002276842.1| PREDICTED: 60S acidic ribosomal protein P0 [...   448   e-123
ref|NP_001238374.1| 60S acidic ribosomal protein P0 [Glycine max...   448   e-123
ref|XP_003616595.1| 60S acidic ribosomal protein p0 [Medicago tr...   447   e-123
emb|CAN80537.1| hypothetical protein VITISV_003812 [Vitis vinifera]   446   e-123

>ref|XP_002268645.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
          Length = 320

 Score =  448 bits (1152), Expect = e-123
 Identities = 226/251 (90%), Positives = 244/251 (97%)
 Frame = +1

Query: 1   EFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTVRLHSEKTGNKAFLNLIP 180
           E++QIL+ AADNVGSNQLQNIR+GLRGDSVVLMGKNTMMKR++RLH+EKTGN AFLNLIP
Sbjct: 24  EYSQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSIRLHAEKTGNTAFLNLIP 83

Query: 181 LLVGNVGLIFTKGDLKEVSEEVGKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQV 360
           LLVGNVGLIFTKGDLKEVSEEV KYKVGAPARVGLVAPIDV+VPPGNTGLDPSQTSFFQV
Sbjct: 84  LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQV 143

Query: 361 LNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAKLGIRPFSYGLVVLTVYDNGSVFN 540
           LNIPTKINKGTVEIITPVELIKK DKVGSSEAALLAKLGIRPFSYGLVVL+VYDNGSVF+
Sbjct: 144 LNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFS 203

Query: 541 PEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAAPHMFINAYKNVLAIAVATDYSYP 720
           PEVLDLTE+DL+ +FAAGVSMVTSL+LAIS+PTLAAAPHMFINAYKNVLA+AVAT+YS+P
Sbjct: 204 PEVLDLTEEDLIEKFAAGVSMVTSLSLAISYPTLAAAPHMFINAYKNVLAVAVATEYSFP 263

Query: 721 HADKVKEILKD 753
            ADKVKE LKD
Sbjct: 264 QADKVKEYLKD 274


>ref|XP_002276842.1| PREDICTED: 60S acidic ribosomal protein P0 [Vitis vinifera]
          Length = 320

 Score =  448 bits (1152), Expect = e-123
 Identities = 224/251 (89%), Positives = 244/251 (97%)
 Frame = +1

Query: 1   EFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTVRLHSEKTGNKAFLNLIP 180
           E+ QIL+ AADNVGSNQLQNIR+GLRGDSVVLMGKNTMMKR++RLH+EKTGN+AFLNLIP
Sbjct: 24  EYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSIRLHAEKTGNQAFLNLIP 83

Query: 181 LLVGNVGLIFTKGDLKEVSEEVGKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQV 360
           LLVGNVGLIFT+GDLKEVSEEV KYKVGAPARVGLVAPIDV+VPPGNTGLDPSQTSFFQV
Sbjct: 84  LLVGNVGLIFTRGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQV 143

Query: 361 LNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAKLGIRPFSYGLVVLTVYDNGSVFN 540
           LNIPTKINKGTVEIITPVELI+K DKVGSSEAALLAKLGIRPFSYGLVVL+VYDNGSVF+
Sbjct: 144 LNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFS 203

Query: 541 PEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAAPHMFINAYKNVLAIAVATDYSYP 720
           PEVLDLTE+DLM +FAAGVSMVTSL+LAIS+PTLAAAPHMF+NAYKNVL++AVATDYS+P
Sbjct: 204 PEVLDLTEEDLMEKFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLSVAVATDYSFP 263

Query: 721 HADKVKEILKD 753
            ADKVKE LKD
Sbjct: 264 QADKVKEFLKD 274


>ref|NP_001238374.1| 60S acidic ribosomal protein P0 [Glycine max]
           gi|1710587|sp|P50346.1|RLA0_SOYBN RecName: Full=60S
           acidic ribosomal protein P0 gi|1196897|gb|AAB63814.1|
           acidic ribosomal protein P0 [Glycine max]
          Length = 320

 Score =  448 bits (1152), Expect = e-123
 Identities = 226/251 (90%), Positives = 243/251 (96%)
 Frame = +1

Query: 1   EFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTVRLHSEKTGNKAFLNLIP 180
           E+ QILVV +DNVGSNQLQNIR+GLRGDSVVLMGKNTMMKR+VR+H+EKTGN A+LNLIP
Sbjct: 24  EYGQILVVNSDNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAYLNLIP 83

Query: 181 LLVGNVGLIFTKGDLKEVSEEVGKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQV 360
           LLVGNVGLIFTKGDLKEVSEEV KYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQV
Sbjct: 84  LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQV 143

Query: 361 LNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAKLGIRPFSYGLVVLTVYDNGSVFN 540
           LNIPTKINKGTVEIITPVELI+K DKVGSSEAALLAKLGIRPFSYGLVVL+VYDNGSVF+
Sbjct: 144 LNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFS 203

Query: 541 PEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAAPHMFINAYKNVLAIAVATDYSYP 720
           PEVLDLTEDDL+G+FAAGVSMVTSL+LAIS+PTLAAAPHMF+NAYKNVLA+AV TDYS+P
Sbjct: 204 PEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFP 263

Query: 721 HADKVKEILKD 753
            ADKVKE LKD
Sbjct: 264 EADKVKEYLKD 274


>ref|XP_003616595.1| 60S acidic ribosomal protein p0 [Medicago truncatula]
           gi|355517930|gb|AES99553.1| 60S acidic ribosomal protein
           p0 [Medicago truncatula]
          Length = 323

 Score =  447 bits (1149), Expect = e-123
 Identities = 227/251 (90%), Positives = 240/251 (95%)
 Frame = +1

Query: 1   EFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTVRLHSEKTGNKAFLNLIP 180
           EF QIL+V ADNVGS QLQNIR GLRGDSVVLMGKNTMMKR+VR+H+EKTGN AFLNLIP
Sbjct: 24  EFTQILIVNADNVGSKQLQNIRGGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAFLNLIP 83

Query: 181 LLVGNVGLIFTKGDLKEVSEEVGKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQV 360
           LLVGNVGLIFTKGDLKEVSEEV KYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQV
Sbjct: 84  LLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQV 143

Query: 361 LNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAKLGIRPFSYGLVVLTVYDNGSVFN 540
           LNIPTKINKGTVEIITPVELIKK DKVGSSEAALLAKLGIRPFSYGLVVL+VYDNGSVFN
Sbjct: 144 LNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFN 203

Query: 541 PEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAAPHMFINAYKNVLAIAVATDYSYP 720
           PEVLDLTEDDL+ +FA GVSMVTSL+LAIS+PTLAAAPHMF+NAYKNVLA+AVAT+YS+P
Sbjct: 204 PEVLDLTEDDLVAKFAIGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAVAVATEYSFP 263

Query: 721 HADKVKEILKD 753
            ADKVKE LKD
Sbjct: 264 EADKVKEFLKD 274


>emb|CAN80537.1| hypothetical protein VITISV_003812 [Vitis vinifera]
          Length = 320

 Score =  446 bits (1148), Expect = e-123
 Identities = 223/251 (88%), Positives = 244/251 (97%)
 Frame = +1

Query: 1   EFNQILVVAADNVGSNQLQNIRRGLRGDSVVLMGKNTMMKRTVRLHSEKTGNKAFLNLIP 180
           E+ QIL+ AADNVGSNQLQNIR+GLRGDSVVLMGKNTMMKR++RLH+EKTGN+AFLNLIP
Sbjct: 24  EYTQILIAAADNVGSNQLQNIRKGLRGDSVVLMGKNTMMKRSIRLHAEKTGNQAFLNLIP 83

Query: 181 LLVGNVGLIFTKGDLKEVSEEVGKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQV 360
           LLVGNVGLIFT+GDLKEVSEEV KYKVGAPARVGLVAPIDV+VPPGNTGLDPSQTSFFQV
Sbjct: 84  LLVGNVGLIFTRGDLKEVSEEVAKYKVGAPARVGLVAPIDVIVPPGNTGLDPSQTSFFQV 143

Query: 361 LNIPTKINKGTVEIITPVELIKKHDKVGSSEAALLAKLGIRPFSYGLVVLTVYDNGSVFN 540
           LNIPTKINKGTVEIITPVELI+K DKVGSSEAALLAKLGIRPFSYGLVVL+VYDNGSVF+
Sbjct: 144 LNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFS 203

Query: 541 PEVLDLTEDDLMGRFAAGVSMVTSLALAISFPTLAAAPHMFINAYKNVLAIAVATDYSYP 720
           PEVLDLTE+DLM +FAAGVSMVTSL+LAIS+PTLAAAPHMF+NAYKNVL++AVAT+YS+P
Sbjct: 204 PEVLDLTEEDLMEKFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLSVAVATEYSFP 263

Query: 721 HADKVKEILKD 753
            ADKVKE LKD
Sbjct: 264 QADKVKEFLKD 274