BLASTX nr result

ID: Coptis21_contig00001825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001825
         (1182 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281183.1| PREDICTED: uncharacterized protein LOC100254...   261   2e-67
ref|XP_002330511.1| single myb histone [Populus trichocarpa] gi|...   235   1e-59
ref|XP_002514135.1| DNA binding protein, putative [Ricinus commu...   235   2e-59
ref|XP_002308277.1| single myb histone [Populus trichocarpa] gi|...   234   2e-59
gb|ACU24534.1| unknown [Glycine max]                                  232   2e-58

>ref|XP_002281183.1| PREDICTED: uncharacterized protein LOC100254369 [Vitis vinifera]
           gi|297738637|emb|CBI27882.3| unnamed protein product
           [Vitis vinifera]
          Length = 281

 Score =  261 bits (667), Expect = 2e-67
 Identities = 150/291 (51%), Positives = 182/291 (62%), Gaps = 1/291 (0%)
 Frame = +1

Query: 64  MGAPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFGHCLAARSNIDLKDKWRNMSVSA 243
           MG PKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEF H L  RSNIDLKDKWRNMSVSA
Sbjct: 1   MGNPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFNHFLFTRSNIDLKDKWRNMSVSA 60

Query: 244 -GQGSRDKFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDAVPSTVKDSSKSPV 420
            GQG R+K R                                   DA    + D+SK+ +
Sbjct: 61  SGQGPREKSRTPKTKANTDAPSAATVSNPQNSSSAAPVTG-----DASADAMDDASKNIL 115

Query: 421 DAKNPQRYTPLIVEAISTMKDPNGSDISSIIGFIEEQRHEVPPNFRKLLSTKLRRLVGQG 600
           D K+  RY  +I EA+S +K+PNGSD S+I+ FIE QRHEVP NFR+LLS++LRRLV Q 
Sbjct: 116 DGKSAPRYNAMIFEALSALKEPNGSDTSTIVSFIE-QRHEVPQNFRRLLSSRLRRLVAQD 174

Query: 601 KLEKVQNCYKIPKESGSGQKASGGTTQKEKDGQRSKQSQTPAVETFSSKLEQXXXXXXXX 780
           KLEKVQNCYKI ++   G K     T K+KD  R +QSQ+         +E+        
Sbjct: 175 KLEKVQNCYKIKRDPSFGTKT---PTPKQKD-IRPRQSQSTDYVASIETVEEAAVAAAYK 230

Query: 781 XXXXXXXXFMAAEAVKESERVAKMAEDSDTLLQLAKDVHDLCCRGEIVLMA 933
                   F+AAEAVKE+ERVAKMAE+S+ +LQ   ++ + C RGE+V +A
Sbjct: 231 VAEAENKSFVAAEAVKEAERVAKMAEESEAMLQFTLEILEKCSRGEVVYIA 281


>ref|XP_002330511.1| single myb histone [Populus trichocarpa]
           gi|222872445|gb|EEF09576.1| single myb histone [Populus
           trichocarpa]
          Length = 279

 Score =  235 bits (600), Expect = 1e-59
 Identities = 139/290 (47%), Positives = 174/290 (60%), Gaps = 1/290 (0%)
 Frame = +1

Query: 64  MGAPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFGHCLAARSNIDLKDKWRNMSVSA 243
           MG PKQKW SEEEEALRAG+AKHGTGKWKNIQ+DPEF   L +RSNIDLKDKWRNM+VSA
Sbjct: 1   MGNPKQKWKSEEEEALRAGIAKHGTGKWKNIQRDPEFNPYLRSRSNIDLKDKWRNMTVSA 60

Query: 244 G-QGSRDKFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDAVPSTVKDSSKSPV 420
           G Q  +DK R                                    AV   + DSS++  
Sbjct: 61  GSQSVKDKSRTLKAKSSPDAAAVVAASTPLSNPHTSAVA-------AVDVVIDDSSEAAA 113

Query: 421 DAKNPQRYTPLIVEAISTMKDPNGSDISSIIGFIEEQRHEVPPNFRKLLSTKLRRLVGQG 600
           D+K   +Y  +I EAIS + +PNG+D S+II +I E+R E+P NFR+ LS++LRRLV Q 
Sbjct: 114 DSKTAPKYNAMIFEAISALNEPNGADTSAIISYI-ERRQELPQNFRRQLSSRLRRLVAQE 172

Query: 601 KLEKVQNCYKIPKESGSGQKASGGTTQKEKDGQRSKQSQTPAVETFSSKLEQXXXXXXXX 780
           KLEKVQN YKI K S  G K     T K+K+  R K  Q   +      + +        
Sbjct: 173 KLEKVQNFYKIKKASSFGTKT---PTPKQKE-VRPKPEQNTGLINSGDTVAEAADDAAYM 228

Query: 781 XXXXXXXXFMAAEAVKESERVAKMAEDSDTLLQLAKDVHDLCCRGEIVLM 930
                   F+A EAVKESERV+KMAED+++LLQLA ++ + C RGEIV+M
Sbjct: 229 VAEAENKSFVATEAVKESERVSKMAEDANSLLQLANEILEKCLRGEIVVM 278


>ref|XP_002514135.1| DNA binding protein, putative [Ricinus communis]
           gi|223546591|gb|EEF48089.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 283

 Score =  235 bits (599), Expect = 2e-59
 Identities = 139/290 (47%), Positives = 173/290 (59%)
 Frame = +1

Query: 64  MGAPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFGHCLAARSNIDLKDKWRNMSVSA 243
           MG PKQKWT+EEEEALRAGVAKHGTGKWKNIQKDPEF   L +RSNIDLKDKWRNMSVSA
Sbjct: 1   MGNPKQKWTAEEEEALRAGVAKHGTGKWKNIQKDPEFNPFLFSRSNIDLKDKWRNMSVSA 60

Query: 244 GQGSRDKFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDAVPSTVKDSSKSPVD 423
           G+ SR                                       D     V DS+K+  D
Sbjct: 61  GEKSRTP--KPKANSDIPPATKAVSPIPVSNLQSSASVITTSPLDEADPMVDDSTKTFGD 118

Query: 424 AKNPQRYTPLIVEAISTMKDPNGSDISSIIGFIEEQRHEVPPNFRKLLSTKLRRLVGQGK 603
           AK   +Y  +I EAIS +   +G+D ++I+ +IE QR  VP NFR+ LS++LRRLV Q K
Sbjct: 119 AKTAPKYNAMIFEAISALNKQHGADTTAIVSYIE-QRQVVPQNFRRQLSSRLRRLVAQEK 177

Query: 604 LEKVQNCYKIPKESGSGQKASGGTTQKEKDGQRSKQSQTPAVETFSSKLEQXXXXXXXXX 783
           LEKVQNC+KI   S    K     T K+KD  R +  Q+ +       +E+         
Sbjct: 178 LEKVQNCFKIKNNSSLETKTP---TPKQKD-VRPRHLQSTSCINSGDTMEEAAVAAAYRI 233

Query: 784 XXXXXXXFMAAEAVKESERVAKMAEDSDTLLQLAKDVHDLCCRGEIVLMA 933
                  F+AAEAVKE+ERV+KMAED+D+LLQLAK++ + C RGE+VL+A
Sbjct: 234 AEAENKSFVAAEAVKEAERVSKMAEDTDSLLQLAKEIFEKCSRGEVVLIA 283


>ref|XP_002308277.1| single myb histone [Populus trichocarpa]
           gi|222854253|gb|EEE91800.1| single myb histone [Populus
           trichocarpa]
          Length = 275

 Score =  234 bits (598), Expect = 2e-59
 Identities = 140/290 (48%), Positives = 171/290 (58%), Gaps = 1/290 (0%)
 Frame = +1

Query: 64  MGAPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFGHCLAARSNIDLKDKWRNMSVSA 243
           MG PKQKWTSEEEEALRAGVAKHGTGKWKNIQ+DPEF   L +RSNIDLKDKWRNM+VSA
Sbjct: 1   MGNPKQKWTSEEEEALRAGVAKHGTGKWKNIQRDPEFNPYLYSRSNIDLKDKWRNMTVSA 60

Query: 244 G-QGSRDKFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDAVPSTVKDSSKSPV 420
           G Q  +DK R                                    A    + D S++  
Sbjct: 61  GSQSVKDKSRTTKVKSIPDAAAAATPLPNPQTSAASAAAAA-----AADVAIDDYSEAAA 115

Query: 421 DAKNPQRYTPLIVEAISTMKDPNGSDISSIIGFIEEQRHEVPPNFRKLLSTKLRRLVGQG 600
           D+K   +Y  +I EAIS   +PNG+D S+II +IE QR E+P NFR+ LS++LRRLV Q 
Sbjct: 116 DSKTAPKYNAMIFEAISAFNEPNGADTSAIISYIE-QRQELPQNFRRQLSSRLRRLVAQE 174

Query: 601 KLEKVQNCYKIPKESGSGQKASGGTTQKEKDGQRSKQSQTPAVETFSSKLEQXXXXXXXX 780
           KLEKVQNCYKI K S  G K     T K       K+ +  +V      +E         
Sbjct: 175 KLEKVQNCYKIKKVSSFGTKT---PTPK-------KEVRPKSVHDTGDTVEGAANDAAYS 224

Query: 781 XXXXXXXXFMAAEAVKESERVAKMAEDSDTLLQLAKDVHDLCCRGEIVLM 930
                   F+A EAVKESERV+KM+ED+D+LLQLA ++ + C RGEIV+M
Sbjct: 225 VAEAENKSFVATEAVKESERVSKMSEDADSLLQLANEILEKCLRGEIVIM 274


>gb|ACU24534.1| unknown [Glycine max]
          Length = 281

 Score =  232 bits (591), Expect = 2e-58
 Identities = 131/291 (45%), Positives = 177/291 (60%), Gaps = 1/291 (0%)
 Frame = +1

Query: 64  MGAPKQKWTSEEEEALRAGVAKHGTGKWKNIQKDPEFGHCLAARSNIDLKDKWRNMSVSA 243
           MG  KQKWT +EE+AL AGV KHG GKWKNI KDP+F   L +RSNIDLKDKWRN+SVS 
Sbjct: 1   MGNQKQKWTQDEEDALIAGVEKHGPGKWKNILKDPQFAPFLTSRSNIDLKDKWRNLSVSN 60

Query: 244 G-QGSRDKFRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDAVPSTVKDSSKSPV 420
           G QGS++K R                                  + A   T  D+S++  
Sbjct: 61  GAQGSKEKSRVPKLKALPAPPAPTATPQNAAPALQ---------NAASDVTPPDASQNDQ 111

Query: 421 DAKNPQRYTPLIVEAISTMKDPNGSDISSIIGFIEEQRHEVPPNFRKLLSTKLRRLVGQG 600
           DAKNP RY  +I EA+S +KD NGSD+++II F+E++  +V  NFR+ LSTKLRRLV QG
Sbjct: 112 DAKNPPRYNAMIFEALSALKDSNGSDMNAIIKFMEQKNLQVNQNFRRALSTKLRRLVSQG 171

Query: 601 KLEKVQNCYKIPKESGSGQKASGGTTQKEKDGQRSKQSQTPAVETFSSKLEQXXXXXXXX 780
           KLEKVQN YK+ KE+ SG K+     +  +  Q  +QS    + T +  +++        
Sbjct: 172 KLEKVQNGYKVKKEASSGTKSPSPKPKDVRPPQPQQQSPASVLMT-NDTIKEAADTAAYR 230

Query: 781 XXXXXXXXFMAAEAVKESERVAKMAEDSDTLLQLAKDVHDLCCRGEIVLMA 933
                   ++AAEAVKE+E+++ + E SD++LQLAKD+++ C RGEI L+A
Sbjct: 231 VADAESKSYLAAEAVKEAEKISLLVEHSDSMLQLAKDIYEQCSRGEIFLLA 281


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