BLASTX nr result

ID: Coptis21_contig00001823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001823
         (1300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528658.1| PREDICTED: uncharacterized protein LOC100818...    59   2e-06
gb|ACU20551.1| unknown [Glycine max]                                   59   3e-06

>ref|XP_003528658.1| PREDICTED: uncharacterized protein LOC100818988 [Glycine max]
          Length = 202

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 18/126 (14%)
 Frame = +2

Query: 80  CSFYYIFAMGTEILRPQDCL-PRRKTYRRSVIRPKRSEPLITK-----LDEPTKN----- 226
           C++YY       +   + C  P  +  +R    P  ++P++ +     L  P+++     
Sbjct: 73  CNYYYYNNNNNHVATSRSCRKPVSRPDQRKRAAPGSAQPVVAEAAAAVLKRPSRDDSRVA 132

Query: 227 -------VTILKRGESIENLVVRVRTTEEIYAGSAFFSSPSPRKVPLPSFSKKSSTFVVD 385
                   TIL+RG+S+++ V       E+YAGSAF  SPSP  +PLPSFS K    V  
Sbjct: 133 RSQSLEMTTILRRGQSLDSAV-----KSEVYAGSAFAVSPSPEALPLPSFSTKKQDSVAV 187

Query: 386 DELATK 403
           D+ AT+
Sbjct: 188 DDSATR 193


>gb|ACU20551.1| unknown [Glycine max]
          Length = 187

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 53/166 (31%), Positives = 70/166 (42%), Gaps = 71/166 (42%)
 Frame = +2

Query: 104 MGTEILRPQDCLP-----------RRKTY------------------RRSVIRPKRSEPL 196
           MGTE+LRPQDC             RR+T+                  R+   RP++ + +
Sbjct: 1   MGTEVLRPQDCFTQRIGVPPPGFSRRRTHGAHHNNKNNNVNNYFRGNRKPTTRPEQRKRV 60

Query: 197 ITK---LDEPT------KNVTILKRGESIE-------------NLVV------------- 271
           + K   LD+        + VTIL+RGES++             NLVV             
Sbjct: 61  VDKRPSLDDSRFSSLEMEKVTILRRGESLDSKLKTEALKKEGDNLVVVGTQRLGPDPDMV 120

Query: 272 -------RVRTTEEIYAGSAFFSSPSPRKVPLPSFSKKSSTFVVDD 388
                    R+  EIYAGSAF  SPSP  +PLPSFSK+     V D
Sbjct: 121 PKQIRIVDFRSGREIYAGSAFAVSPSPSALPLPSFSKRQPAVAVAD 166


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