BLASTX nr result

ID: Coptis21_contig00001802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001802
         (1580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284045.1| PREDICTED: endoplasmic reticulum-Golgi inter...   607   e-171
ref|XP_002322569.1| predicted protein [Populus trichocarpa] gi|2...   585   e-165
ref|XP_002307923.1| predicted protein [Populus trichocarpa] gi|2...   584   e-164
gb|ABK93267.1| unknown [Populus trichocarpa]                          575   e-162
ref|XP_003555674.1| PREDICTED: endoplasmic reticulum-Golgi inter...   571   e-160

>ref|XP_002284045.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
            protein 3 [Vitis vinifera] gi|296086333|emb|CBI31774.3|
            unnamed protein product [Vitis vinifera]
          Length = 351

 Score =  607 bits (1565), Expect = e-171
 Identities = 297/351 (84%), Positives = 319/351 (90%), Gaps = 5/351 (1%)
 Frame = +3

Query: 105  MGIKQALKSLDAFPRAEEHLMQKTRSGAVVSIIGLAIMATLFLHELQYYLSVYTVHQMSV 284
            MG+KQ +KSL AFPRAEEHL+QKT+SGAVVSIIGL IMATLFLHEL+YYL+ YTVHQMSV
Sbjct: 1    MGVKQFIKSLHAFPRAEEHLLQKTQSGAVVSIIGLVIMATLFLHELRYYLTTYTVHQMSV 60

Query: 285  DLKRGEILPIHINMTFPSLPCDVVSVDAIDMSGKHEVDLDTNIWKLRMSKDGHIIGTEYV 464
            DLKRGE LPIHINMTFPSLPCDV+SVDAIDMSGKHEVDLDTNIWKLR+++DG IIGTEY+
Sbjct: 61   DLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNRDGFIIGTEYL 120

Query: 465  SDLVEKGNTDHKHDDDS-----SLQKHHAHGFGEDAEKMVKKVKQALADGEGCRVYGVLD 629
            SDLVEK + DHKHD +      S QK HAH F +DAE MVKKVKQALA+GEGCRVYGVLD
Sbjct: 121  SDLVEKEHADHKHDHNKDHHGDSDQKLHAHSFDQDAENMVKKVKQALANGEGCRVYGVLD 180

Query: 630  VQRVAGNFHISVHGLNIFVAQQIFEGATHVNVSHVIHDLSFGPKYPGLHNPLDGTDRILR 809
            VQRVAGNFHISVHGLNIFVAQ IF+GA HVNVSH+IHDLSFGPKYPGLHNPLDGT RILR
Sbjct: 181  VQRVAGNFHISVHGLNIFVAQMIFDGAIHVNVSHIIHDLSFGPKYPGLHNPLDGTVRILR 240

Query: 810  GPSGTFKYYIKIVPTEYRYLSKEVLPTNQFSVTEYFVPMTEFDRTWPAVYFLYDLSPITV 989
            G SGTFKYYIKIVPTEYRY+SKEVLPTNQFSV EYF PM EFDRTWPAVYFLYDLSP+TV
Sbjct: 241  GASGTFKYYIKIVPTEYRYISKEVLPTNQFSVMEYFSPMNEFDRTWPAVYFLYDLSPVTV 300

Query: 990  TIKEEHRSFLHFITRLCAVLGGTFALTGLLDRWMYRFLEALTKSTSRSVLR 1142
            TIKEE RSFLHFITRLCAVLGGTFALTG+LDRWMYRFLE LTK  ++SV R
Sbjct: 301  TIKEERRSFLHFITRLCAVLGGTFALTGMLDRWMYRFLEMLTKPNAKSVYR 351


>ref|XP_002322569.1| predicted protein [Populus trichocarpa] gi|222867199|gb|EEF04330.1|
            predicted protein [Populus trichocarpa]
          Length = 351

 Score =  585 bits (1509), Expect = e-165
 Identities = 281/343 (81%), Positives = 310/343 (90%), Gaps = 5/343 (1%)
 Frame = +3

Query: 105  MGIKQALKSLDAFPRAEEHLMQKTRSGAVVSIIGLAIMATLFLHELQYYLSVYTVHQMSV 284
            MG+KQA+KSLDAFPRAEEHL+QKT+SGA+VS+IGL IMATLF HEL YYL+ YTVHQMSV
Sbjct: 1    MGVKQAIKSLDAFPRAEEHLLQKTQSGALVSVIGLVIMATLFYHELAYYLTTYTVHQMSV 60

Query: 285  DLKRGEILPIHINMTFPSLPCDVVSVDAIDMSGKHEVDLDTNIWKLRMSKDGHIIGTEYV 464
            DL+RGEILPIH+N+TFPSLPCDV+SVDAIDMSGKHEVDLDTNIWKLR++  GHI GTEY+
Sbjct: 61   DLQRGEILPIHVNITFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSHGHITGTEYL 120

Query: 465  SDLVEKGNTDHKHDDDS-----SLQKHHAHGFGEDAEKMVKKVKQALADGEGCRVYGVLD 629
            SDLVEK +  H HD D      S ++ H HGF + AE M+KKVKQALA+GEGCRVYGVLD
Sbjct: 121  SDLVEKEHEAHNHDHDKDHHKDSHEEQHTHGFDDAAETMIKKVKQALANGEGCRVYGVLD 180

Query: 630  VQRVAGNFHISVHGLNIFVAQQIFEGATHVNVSHVIHDLSFGPKYPGLHNPLDGTDRILR 809
            VQRVAGNFHISVHGLNIFVAQ IF+GA HVNVSH+IHDLSFGPKYPG+HNPLDGT RILR
Sbjct: 181  VQRVAGNFHISVHGLNIFVAQMIFDGAKHVNVSHIIHDLSFGPKYPGIHNPLDGTARILR 240

Query: 810  GPSGTFKYYIKIVPTEYRYLSKEVLPTNQFSVTEYFVPMTEFDRTWPAVYFLYDLSPITV 989
              SG FKYYIKIVPTEYRY+SK+VLPTNQFSVTEYF P+T+FDRTWPAVYFLYDLSPITV
Sbjct: 241  ETSGIFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSPITDFDRTWPAVYFLYDLSPITV 300

Query: 990  TIKEEHRSFLHFITRLCAVLGGTFALTGLLDRWMYRFLEALTK 1118
            TIKEE RSFLHFITRLCA+LGGTFALTG+LDRWMYR LEALTK
Sbjct: 301  TIKEERRSFLHFITRLCAILGGTFALTGMLDRWMYRLLEALTK 343


>ref|XP_002307923.1| predicted protein [Populus trichocarpa] gi|222853899|gb|EEE91446.1|
            predicted protein [Populus trichocarpa]
          Length = 351

 Score =  584 bits (1505), Expect = e-164
 Identities = 287/351 (81%), Positives = 309/351 (88%), Gaps = 5/351 (1%)
 Frame = +3

Query: 105  MGIKQALKSLDAFPRAEEHLMQKTRSGAVVSIIGLAIMATLFLHELQYYLSVYTVHQMSV 284
            MG+KQA+K LDAFPRAEEHL+QKT+SGA+VSIIGL  MATLF HEL YYL+ YTVHQMSV
Sbjct: 1    MGMKQAIKKLDAFPRAEEHLLQKTQSGALVSIIGLVTMATLFYHELAYYLTTYTVHQMSV 60

Query: 285  DLKRGEILPIHINMTFPSLPCDVVSVDAIDMSGKHEVDLDTNIWKLRMSKDGHIIGTEYV 464
            DL RGE LPIHIN+TFPSLPCDV+SVDAIDMSGKHEVDLDT+IWKLR++  GHI GTEY+
Sbjct: 61   DLTRGETLPIHINITFPSLPCDVLSVDAIDMSGKHEVDLDTSIWKLRLNSYGHITGTEYL 120

Query: 465  SDLVEKGNTDHKHDD-----DSSLQKHHAHGFGEDAEKMVKKVKQALADGEGCRVYGVLD 629
            SDLVEK +  H HD      + S  K H HGF + AE MVKKVKQALA+GEGCRVYGVLD
Sbjct: 121  SDLVEKEHEAHNHDHNKDHHEDSHAKQHTHGFDDAAETMVKKVKQALANGEGCRVYGVLD 180

Query: 630  VQRVAGNFHISVHGLNIFVAQQIFEGATHVNVSHVIHDLSFGPKYPGLHNPLDGTDRILR 809
            VQRVAGNFHISVHGLNIFVAQ IF+GA HVNVSH+IHDLSFGPKYPG+HNPLDGT RIL 
Sbjct: 181  VQRVAGNFHISVHGLNIFVAQMIFDGAKHVNVSHIIHDLSFGPKYPGIHNPLDGTTRILH 240

Query: 810  GPSGTFKYYIKIVPTEYRYLSKEVLPTNQFSVTEYFVPMTEFDRTWPAVYFLYDLSPITV 989
              SGTFKYYIKIVPTEYRY+SKEVLPTNQFSVTEYF PMT+FDRTWPAVYFLYDLSPITV
Sbjct: 241  ETSGTFKYYIKIVPTEYRYISKEVLPTNQFSVTEYFSPMTDFDRTWPAVYFLYDLSPITV 300

Query: 990  TIKEEHRSFLHFITRLCAVLGGTFALTGLLDRWMYRFLEALTKSTSRSVLR 1142
            TIKEE RSFLHFITRLCAVLGGTFALTG+LDRWM R LEALTK   RSVLR
Sbjct: 301  TIKEERRSFLHFITRLCAVLGGTFALTGMLDRWMCRLLEALTKPNPRSVLR 351


>gb|ABK93267.1| unknown [Populus trichocarpa]
          Length = 366

 Score =  575 bits (1483), Expect = e-162
 Identities = 281/358 (78%), Positives = 310/358 (86%), Gaps = 20/358 (5%)
 Frame = +3

Query: 105  MGIKQALKSLDAFPRAEEHLMQKTRSGAVVSIIGLAIMATLFLHELQYYLSVYTVHQMSV 284
            MG+KQA+KSLDAFPRAEEHL+QKT+SGA+VS+IGL IMATLF HEL YYL+ YTVHQMSV
Sbjct: 1    MGVKQAIKSLDAFPRAEEHLLQKTQSGALVSVIGLVIMATLFYHELAYYLTTYTVHQMSV 60

Query: 285  DLKRGEILPIHINMTFPSLPCDVVSVDAIDMSGKHEVDLDTNIWK--------------- 419
            DL+RGEILPIH+N+TFPSLPCDV+SVDAIDMSGKHEVDLDTNIWK               
Sbjct: 61   DLQRGEILPIHVNITFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKKLLFGMLLTRIEFLQ 120

Query: 420  LRMSKDGHIIGTEYVSDLVEKGNTDHKHDDDS-----SLQKHHAHGFGEDAEKMVKKVKQ 584
            LR++  GHI GTEY+SDLVEK +  H HD D      S ++ H HGF + AE M+KKVKQ
Sbjct: 121  LRLNSHGHITGTEYLSDLVEKEHEAHNHDHDKDHHKDSHEEQHTHGFDDAAETMIKKVKQ 180

Query: 585  ALADGEGCRVYGVLDVQRVAGNFHISVHGLNIFVAQQIFEGATHVNVSHVIHDLSFGPKY 764
            ALA+GEGCRVYGVLDVQRVAGNFHISVHGLNIFVAQ IF+GA HVNVSH+IHDLSFGPKY
Sbjct: 181  ALANGEGCRVYGVLDVQRVAGNFHISVHGLNIFVAQMIFDGAKHVNVSHIIHDLSFGPKY 240

Query: 765  PGLHNPLDGTDRILRGPSGTFKYYIKIVPTEYRYLSKEVLPTNQFSVTEYFVPMTEFDRT 944
            PG+HNPLDGT RILR  SG FKYYIKIVPTEYRY+SK+VLPTNQFSVTEYF P+T+FDRT
Sbjct: 241  PGIHNPLDGTARILRETSGIFKYYIKIVPTEYRYISKDVLPTNQFSVTEYFSPITDFDRT 300

Query: 945  WPAVYFLYDLSPITVTIKEEHRSFLHFITRLCAVLGGTFALTGLLDRWMYRFLEALTK 1118
            WPAVYFLYDLSPITVTIKEE RSFLHFITRLCA+LGGTFALTG+LDRWMYR LEALTK
Sbjct: 301  WPAVYFLYDLSPITVTIKEERRSFLHFITRLCAILGGTFALTGMLDRWMYRLLEALTK 358


>ref|XP_003555674.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
            protein 3-like [Glycine max]
          Length = 347

 Score =  571 bits (1471), Expect = e-160
 Identities = 275/346 (79%), Positives = 307/346 (88%), Gaps = 4/346 (1%)
 Frame = +3

Query: 105  MGIKQALKSLDAFPRAEEHLMQKTRSGAVVSIIGLAIMATLFLHELQYYLSVYTVHQMSV 284
            MG+KQ +K+LDAFPRAE+HL+QKT+SGA+VS+IGL IMATLF+HEL YYL+ YTVHQMSV
Sbjct: 1    MGMKQVIKNLDAFPRAEDHLLQKTQSGALVSVIGLIIMATLFVHELGYYLTTYTVHQMSV 60

Query: 285  DLKRGEILPIHINMTFPSLPCDVVSVDAIDMSGKHEVDLDTNIWKLRMSKDGHIIGTEYV 464
            DLKRGE LPIHINMTFPSLPCDV+SVDAIDMSGKHEVDLDTNIWKLR++  GHIIGTEY+
Sbjct: 61   DLKRGETLPIHINMTFPSLPCDVLSVDAIDMSGKHEVDLDTNIWKLRLNSYGHIIGTEYI 120

Query: 465  SDLVEKGNTDHKHDDDS----SLQKHHAHGFGEDAEKMVKKVKQALADGEGCRVYGVLDV 632
            SDLVEK +T HKHDD+     S QK H     E  E ++KKVK+AL +GEGCRVYGVLDV
Sbjct: 121  SDLVEKEHTHHKHDDNKNHEHSEQKIHLQNLDESTENIIKKVKEALKNGEGCRVYGVLDV 180

Query: 633  QRVAGNFHISVHGLNIFVAQQIFEGATHVNVSHVIHDLSFGPKYPGLHNPLDGTDRILRG 812
            QRVAGNFHISVHGLNI+VAQ IF+GA +VNVSH IHDLSFGPKYPGLHNPLD T RIL  
Sbjct: 181  QRVAGNFHISVHGLNIYVAQMIFDGAKNVNVSHFIHDLSFGPKYPGLHNPLDDTTRILHD 240

Query: 813  PSGTFKYYIKIVPTEYRYLSKEVLPTNQFSVTEYFVPMTEFDRTWPAVYFLYDLSPITVT 992
             SGTFKYYIK+VPTEYRY+SKEVLPTNQFSV+EY+ P+ +FDRTWPAVYFLYDLSPITVT
Sbjct: 241  TSGTFKYYIKVVPTEYRYISKEVLPTNQFSVSEYYSPINQFDRTWPAVYFLYDLSPITVT 300

Query: 993  IKEEHRSFLHFITRLCAVLGGTFALTGLLDRWMYRFLEALTKSTSR 1130
            IKEE RSFLHFITRLCAVLGGTFA+TG+LDRWMYR LE LTKS S+
Sbjct: 301  IKEERRSFLHFITRLCAVLGGTFAVTGMLDRWMYRLLETLTKSKSK 346


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