BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001800
         (1268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|2...   374   e-101
gb|AFK45366.1| unknown [Lotus japonicus]                              371   e-100
ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus ...   371   e-100
ref|XP_002271466.1| PREDICTED: 50S ribosomal protein L3-1, chlor...   370   e-100
ref|XP_003522341.1| PREDICTED: 50S ribosomal protein L3-1, chlor...   370   e-100

>ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|222857589|gb|EEE95136.1|
            predicted protein [Populus trichocarpa]
          Length = 222

 Score =  374 bits (959), Expect = e-101
 Identities = 183/221 (82%), Positives = 199/221 (90%)
 Frame = +1

Query: 346  SMEAGIGVMGTKLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTEATDGYDSVQVGYRRV 525
            SMEAG+GVMGTKLGMMTYFE            FREGNIVTQIKT+ATDGYD+VQVGYRRV
Sbjct: 2    SMEAGVGVMGTKLGMMTYFEPNGKVVPVTVVGFREGNIVTQIKTDATDGYDAVQVGYRRV 61

Query: 526  RDKKLTMPEMGHLKKVGAIPMRHLQEFRLTSVEGFEPNQRLVVKDIFKEGDLVDVSGTTI 705
            RDKKLT PEMGHL+K G IPMRHLQEFRL  ++GFE  Q+L+ +++FKEGDLVDVSGTTI
Sbjct: 62   RDKKLTKPEMGHLEKAGVIPMRHLQEFRLQGLDGFEIGQKLLFEELFKEGDLVDVSGTTI 121

Query: 706  GKGFQGGIKRWNFKRGPMSHGSKSHRAIGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKL 885
            GKGFQGGIKR NFKRGPMSHGSKSHRA+GSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKL
Sbjct: 122  GKGFQGGIKRHNFKRGPMSHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKL 181

Query: 886  RIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 1008
            +IVKID DLR+VMI+GALPGKPGNLLRIAPAKIVGKNIPK+
Sbjct: 182  KIVKIDNDLRVVMIKGALPGKPGNLLRIAPAKIVGKNIPKS 222


>gb|AFK45366.1| unknown [Lotus japonicus]
          Length = 268

 Score =  371 bits (952), Expect = e-100
 Identities = 180/225 (80%), Positives = 199/225 (88%)
 Frame = +1

Query: 334  VTHSSMEAGIGVMGTKLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTEATDGYDSVQVG 513
            V   SMEAG+GVMGTKLGMM+YFE            F+EGNIVTQ+KTEATDGYD+VQVG
Sbjct: 44   VVMMSMEAGVGVMGTKLGMMSYFEENGVVVPVTVVGFKEGNIVTQLKTEATDGYDAVQVG 103

Query: 514  YRRVRDKKLTMPEMGHLKKVGAIPMRHLQEFRLTSVEGFEPNQRLVVKDIFKEGDLVDVS 693
            Y+R+RD+KLT PE+GHL+KVGAIPMRHLQEFRL S+EGF+ NQRLV  ++FKEGDLVDVS
Sbjct: 104  YQRIRDRKLTKPELGHLEKVGAIPMRHLQEFRLQSLEGFDLNQRLVFDELFKEGDLVDVS 163

Query: 694  GTTIGKGFQGGIKRWNFKRGPMSHGSKSHRAIGSIGAGTTPGRVYKGKKMPGRMGGTKTK 873
            GTTIGKGFQGGIKRWNFKRGPMSHG KSHR +GSIGAGTTPGRVY GKKMPGRMGGTK K
Sbjct: 164  GTTIGKGFQGGIKRWNFKRGPMSHGFKSHRQLGSIGAGTTPGRVYPGKKMPGRMGGTKRK 223

Query: 874  IRKLRIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 1008
            IRKL+IVKID+DL +VMI+GALPGKPGNLLRI PAKIVGKNIPKN
Sbjct: 224  IRKLKIVKIDKDLNVVMIKGALPGKPGNLLRITPAKIVGKNIPKN 268


>ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus communis]
            gi|223536694|gb|EEF38335.1| 50S ribosomal protein L3,
            putative [Ricinus communis]
          Length = 285

 Score =  371 bits (952), Expect = e-100
 Identities = 184/236 (77%), Positives = 204/236 (86%), Gaps = 1/236 (0%)
 Frame = +1

Query: 304  CSNPMRARRM-VTHSSMEAGIGVMGTKLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTE 480
            C+N  +   + +   SMEAGIGVMGTKLGMM+YFE            FREGNIVTQIKTE
Sbjct: 50   CTNGTKTSGLSIVAMSMEAGIGVMGTKLGMMSYFESDGTVVPVTVVGFREGNIVTQIKTE 109

Query: 481  ATDGYDSVQVGYRRVRDKKLTMPEMGHLKKVGAIPMRHLQEFRLTSVEGFEPNQRLVVKD 660
            ATDGYDSVQVGYRR+RD+KLT PE+GHL+K G IPMRHLQEFRL +++GFE  Q+LV+++
Sbjct: 110  ATDGYDSVQVGYRRIRDRKLTKPELGHLEKAGVIPMRHLQEFRLQNIDGFEVGQKLVLEE 169

Query: 661  IFKEGDLVDVSGTTIGKGFQGGIKRWNFKRGPMSHGSKSHRAIGSIGAGTTPGRVYKGKK 840
            IFKEGDLVDVSG TIGKGFQGGIKR NFKRG M+HGSKSHRA+GSIGAGTTPGRVYKGKK
Sbjct: 170  IFKEGDLVDVSGITIGKGFQGGIKRHNFKRGQMTHGSKSHRALGSIGAGTTPGRVYKGKK 229

Query: 841  MPGRMGGTKTKIRKLRIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 1008
            MPGRMGGTKTKIRKL+IVKID DLR VMI+GALPGKPGNLLRIAPAKIVGKNIPKN
Sbjct: 230  MPGRMGGTKTKIRKLKIVKIDNDLRAVMIKGALPGKPGNLLRIAPAKIVGKNIPKN 285


>ref|XP_002271466.1| PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Vitis
            vinifera]
          Length = 281

 Score =  370 bits (951), Expect = e-100
 Identities = 179/225 (79%), Positives = 198/225 (88%)
 Frame = +1

Query: 334  VTHSSMEAGIGVMGTKLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTEATDGYDSVQVG 513
            +   SMEAG+GVM TKLGMM+YFE            FREGNIVTQ+KTEATDGY +VQVG
Sbjct: 57   IIRMSMEAGVGVMATKLGMMSYFEPEGKVVPVTVVGFREGNIVTQVKTEATDGYSAVQVG 116

Query: 514  YRRVRDKKLTMPEMGHLKKVGAIPMRHLQEFRLTSVEGFEPNQRLVVKDIFKEGDLVDVS 693
            YRRVRD+KLT PEMGHL+K G IPMRHLQEFRL SV+GFEPNQ+LV +++FKEGDLVDVS
Sbjct: 117  YRRVRDRKLTKPEMGHLEKAGTIPMRHLQEFRLVSVDGFEPNQKLVFEELFKEGDLVDVS 176

Query: 694  GTTIGKGFQGGIKRWNFKRGPMSHGSKSHRAIGSIGAGTTPGRVYKGKKMPGRMGGTKTK 873
            G TIGKGFQGGIKR NF+RGPM+HGSKSHRA+GSIGAGTTPG VYKGKKMPGRMGGTKTK
Sbjct: 177  GITIGKGFQGGIKRHNFRRGPMTHGSKSHRALGSIGAGTTPGHVYKGKKMPGRMGGTKTK 236

Query: 874  IRKLRIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 1008
            IRKL+IVKID DLR+VMI+GA+PGKPGNLLRI PAKIVGKNIPKN
Sbjct: 237  IRKLKIVKIDNDLRVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN 281


>ref|XP_003522341.1| PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Glycine
            max]
          Length = 263

 Score =  370 bits (949), Expect = e-100
 Identities = 181/221 (81%), Positives = 199/221 (90%)
 Frame = +1

Query: 346  SMEAGIGVMGTKLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTEATDGYDSVQVGYRRV 525
            SMEAGIGVMGTKLGMM+YFE            F+EGNIVTQIKTEATDGYD+VQVGYRRV
Sbjct: 43   SMEAGIGVMGTKLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRV 102

Query: 526  RDKKLTMPEMGHLKKVGAIPMRHLQEFRLTSVEGFEPNQRLVVKDIFKEGDLVDVSGTTI 705
            RD+KLT PE+GHL+KVGAIPMRHLQEFRL +++GF+ NQRLV  +IFKEGDLVDVSGTTI
Sbjct: 103  RDRKLTKPEIGHLQKVGAIPMRHLQEFRLQAIDGFDLNQRLVFDEIFKEGDLVDVSGTTI 162

Query: 706  GKGFQGGIKRWNFKRGPMSHGSKSHRAIGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKL 885
            GKGFQGGIKR NFKRGPM+HGSKSHR +GSIGAGTTPGRVYKGKKMPGRMGGTK KIRKL
Sbjct: 163  GKGFQGGIKRHNFKRGPMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKL 222

Query: 886  RIVKIDEDLRIVMIQGALPGKPGNLLRIAPAKIVGKNIPKN 1008
            +IVKID+DL +VMI+GA+PGKPGNLLRI PAKIVGKNIPKN
Sbjct: 223  KIVKIDKDLNVVMIKGAVPGKPGNLLRITPAKIVGKNIPKN 263