BLASTX nr result

ID: Coptis21_contig00001792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00001792
         (460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264302.1| PREDICTED: zinc finger protein ZAT10-like [V...   103   2e-20
emb|CAN61204.1| hypothetical protein VITISV_013668 [Vitis vinifera]   103   2e-20
ref|NP_001234718.1| C2H2-type zinc finger protein [Solanum lycop...   100   1e-19
gb|ADL36636.1| C2H2L domain class transcription factor [Malus x ...    98   6e-19
dbj|BAA05079.1| zinc-finger protein [Petunia x hybrida]                97   1e-18

>ref|XP_002264302.1| PREDICTED: zinc finger protein ZAT10-like [Vitis vinifera]
          Length = 235

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/110 (49%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
 Frame = +1

Query: 58  SGRGHECSICHRSFPSGQALGGHKRCHYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 237
           SG+ HECSICHR+FP+GQALGGHKRCHYD                               
Sbjct: 133 SGKTHECSICHRTFPTGQALGGHKRCHYD----------------GGSSGVTSSEGAVSS 176

Query: 238 QNHRGFDLNLPSLNEFWPGF--------GTVLDQEVESPLPLKKPRFLIP 363
            +HR FDLNLP+L +FWP F         T ++QEVESPLP KKPRFL P
Sbjct: 177 HSHRDFDLNLPALPDFWPRFRVDGGRKSQTGVEQEVESPLPAKKPRFLFP 226


>emb|CAN61204.1| hypothetical protein VITISV_013668 [Vitis vinifera]
          Length = 324

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/110 (49%), Positives = 62/110 (56%), Gaps = 8/110 (7%)
 Frame = +1

Query: 58  SGRGHECSICHRSFPSGQALGGHKRCHYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 237
           SG+ HECSICHR+FP+GQALGGHKRCHYD                               
Sbjct: 222 SGKTHECSICHRTFPTGQALGGHKRCHYD----------------GGSSGVTSSEGAVSS 265

Query: 238 QNHRGFDLNLPSLNEFWPGF--------GTVLDQEVESPLPLKKPRFLIP 363
            +HR FDLNLP+L +FWP F         T ++QEVESPLP KKPRFL P
Sbjct: 266 HSHRDFDLNLPALPDFWPRFRVDGGRKSQTGVEQEVESPLPAKKPRFLFP 315


>ref|NP_001234718.1| C2H2-type zinc finger protein [Solanum lycopersicum]
           gi|150406379|gb|ABR68563.1| C2H2-type zinc finger
           protein [Solanum lycopersicum]
           gi|302028373|gb|ADK91083.1| cold zinc finger protein 1
           [Solanum lycopersicum]
          Length = 260

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/102 (49%), Positives = 58/102 (56%)
 Frame = +1

Query: 58  SGRGHECSICHRSFPSGQALGGHKRCHYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 237
           +GR HECSICH+ FP+GQALGGHKRCHYD                               
Sbjct: 152 TGRTHECSICHKCFPTGQALGGHKRCHYDGGNSNGNGNANANSSISASVGVTSSEGVGST 211

Query: 238 QNHRGFDLNLPSLNEFWPGFGTVLDQEVESPLPLKKPRFLIP 363
            +HR FDLN+P+L EFWPGFG+  D EVESP P KK R  +P
Sbjct: 212 ISHRDFDLNIPALPEFWPGFGSGED-EVESPHPAKKSRLSLP 252


>gb|ADL36636.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 246

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/107 (47%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
 Frame = +1

Query: 58  SGRGHECSICHRSFPSGQALGGHKRCHYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 237
           S R HECSICH++FP+GQALGGHKRCHYD                               
Sbjct: 144 SARTHECSICHKTFPTGQALGGHKRCHYD-------GGSAVTTSEGGGAGASSHSQSQSH 196

Query: 238 QNHRGFDLNLPSLNEFWPGFGTVL------DQEVESPLPLKKPRFLI 360
           Q+ RGFDLNLP+L EFWPGFG         +QEV+SP+  KKPR+L+
Sbjct: 197 QSQRGFDLNLPALPEFWPGFGADKKSQLSGEQEVQSPMVAKKPRWLL 243


>dbj|BAA05079.1| zinc-finger protein [Petunia x hybrida]
          Length = 253

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/102 (49%), Positives = 58/102 (56%)
 Frame = +1

Query: 58  SGRGHECSICHRSFPSGQALGGHKRCHYDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 237
           +GR HECSICH+ FP+GQALGGHKRCHYD                               
Sbjct: 151 NGRTHECSICHKCFPTGQALGGHKRCHYD-------GGNGNGNGSVSVGVTSSEGVGSTI 203

Query: 238 QNHRGFDLNLPSLNEFWPGFGTVLDQEVESPLPLKKPRFLIP 363
            +HR FDLN+P+L EFWPGFG+  D EVESP P KK R  +P
Sbjct: 204 SHHRDFDLNIPALPEFWPGFGSGED-EVESPHPAKKSRLSLP 244